Experiment set1IT038 for Pseudomonas syringae pv. syringae B728a ΔmexB

Compare to:

KB with Phloretin 125 ug/ml

200 most detrimental genes:

  gene name fitness t score description  
Psyr_3679 +1.1 1.6 cob(II)yrinic acid a,c-diamide reductase compare
Psyr_2253 +1.0 2.7 Phosphonate metabolism compare
Psyr_0214 +1.0 2.4 conserved hypothetical protein compare
Psyr_3672 +0.9 1.5 cobalamin-5'-phosphate synthase compare
Psyr_3693 +0.8 3.6 conserved hypothetical protein compare
Psyr_3782 +0.8 2.4 CsbD-like protein compare
Psyr_2147 +0.8 2.6 conserved hypothetical protein compare
Psyr_3444 +0.8 1.8 Flagellar transport protein FliP compare
Psyr_4588 +0.8 3.0 Phage GP46 compare
Psyr_0864 +0.8 2.2 Protein of unknown function DUF393 compare
Psyr_2292 +0.8 1.1 L-glutaminase compare
Psyr_0176 +0.8 1.2 conserved hypothetical protein compare
Psyr_0789 +0.8 2.1 chemotaxis sensory transducer compare
Psyr_3652 +0.8 2.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_3664 +0.8 2.2 DTW compare
Psyr_0444 +0.8 2.6 Malonate decarboxylase delta subunit compare
Psyr_2747 +0.8 1.9 amino acid/amide ABC transporter substrate-binding protein, HAAT family compare
Psyr_2279 +0.8 2.9 conserved hypothetical protein compare
Psyr_3777 +0.7 2.8 conserved hypothetical protein compare
Psyr_2062 +0.7 2.4 DoxD-like family protein compare
Psyr_3356 +0.7 1.8 conserved hypothetical protein compare
Psyr_2388 +0.7 1.5 Twin-arginine translocation pathway signal compare
Psyr_1036 +0.7 1.1 conserved hypothetical protein compare
Psyr_2624 +0.7 1.3 lipoprotein, putative compare
Psyr_3324 +0.7 3.0 transcriptional regulator, TetR family compare
Psyr_4429 +0.7 2.6 ABC transporter compare
Psyr_3939 +0.7 2.8 transcriptional regulator, GntR family compare
Psyr_2781 +0.7 1.2 hypothetical protein compare
Psyr_2757 +0.7 1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5036 +0.7 1.8 Response regulator receiver compare
Psyr_3039 +0.7 1.6 protein of unknown function DUF883 compare
Psyr_2894 +0.7 1.4 conserved hypothetical protein compare
Psyr_3854 +0.7 1.6 OmpA/MotB compare
Psyr_0907 +0.7 2.1 conserved hypothetical protein compare
Psyr_1902 +0.6 1.7 Glycerophosphoryl diester phosphodiesterase compare
Psyr_1624 +0.6 1.1 transcriptional regulator, MarR family compare
Psyr_1388 +0.6 1.5 Protein of unknown function UPF0066 compare
Psyr_0616 +0.6 1.7 conserved domain protein compare
Psyr_2429 +0.6 2.4 conserved hypothetical protein compare
Psyr_1187 +0.6 1.7 type III chaperone protein ShcE compare
Psyr_3518 +0.6 1.8 hypothetical protein compare
Psyr_0863 +0.6 1.9 PhnA protein compare
Psyr_2092 +0.6 2.1 Protein of unknown function 1935 compare
Psyr_2758 +0.6 2.5 ABC transporter:TOBE compare
Psyr_1424 +0.6 2.3 Peptidase S24, S26A and S26B compare
Psyr_2737 +0.6 1.5 hypothetical protein compare
Psyr_2847 +0.6 1.3 hypothetical protein compare
Psyr_4155 +0.6 3.0 Protein of unknown function DUF615 compare
Psyr_0437 +0.6 1.3 acyl carrier protein, putative compare
Psyr_2619 +0.6 1.5 diaminobutyrate aminotransferase apoenzyme compare
Psyr_4085 +0.6 3.0 hypothetical protein compare
Psyr_1067 +0.6 2.4 GTP cyclohydrolase subunit MoaC compare
Psyr_0318 +0.6 1.9 cell division protein ZapA compare
Psyr_2679 +0.6 2.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4830 +0.6 1.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3266 +0.6 1.7 Oxidoreductase, N-terminal:Oxidoreductase, C-terminal compare
Psyr_3459 +0.6 1.2 Helix-turn-helix, Fis-type compare
Psyr_0212 +0.6 1.5 Conserved hypothetical protein 255 compare
Psyr_2933 +0.6 1.3 transcriptional regulator, TetR family compare
Psyr_1694 +0.6 1.6 Rhomboid-like protein compare
Psyr_2411 +0.6 1.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_3772 +0.6 1.6 conserved hypothetical protein compare
Psyr_3191 +0.6 1.9 Protein of unknown function DUF489 compare
Psyr_4902 +0.5 1.7 Protein of unknown function DUF495 compare
Psyr_1968 +0.5 1.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1223 +0.5 0.9 CDS compare
Psyr_2544 +0.5 2.1 Alkylhydroperoxidase AhpD core:Uncharacterized peroxidase-related protein compare
Psyr_0256 +0.5 2.7 Phenylacetic acid degradation-related protein compare
Psyr_4838 +0.5 1.7 transcriptional regulator, MerR family compare
Psyr_2155 +0.5 1.5 Carbohydrate kinase, PfkB compare
Psyr_3584 +0.5 2.4 condensin subunit ScpA compare
Psyr_1651 +0.5 2.6 Protein of unknown function DUF175 compare
Psyr_2674 +0.5 1.3 conserved hypothetical protein compare
Psyr_2135 +0.5 2.3 molybdenum cofactor guanylyltransferase compare
Psyr_2393 +0.5 2.2 Flavin reductase-like protein compare
Psyr_1799 +0.5 1.6 Protein of unknown function DUF6 compare
Psyr_2177 +0.5 2.1 probable sulfopyruvate decarboxylase compare
Psyr_0213 +0.5 2.6 RNAse PH compare
Psyr_3612 +0.5 2.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_2612 +0.5 1.1 syrP protein, putative compare
Psyr_2788 +0.5 2.2 hypothetical protein compare
Psyr_0350 +0.5 1.1 ABC transporter compare
Psyr_1357 +0.5 1.2 RNase HII compare
Psyr_0517 +0.5 0.7 Dihydrolipoamide acetyltransferase compare
Psyr_3405 +0.5 1.9 Abortive infection protein compare
Psyr_1645 +0.5 2.8 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_4766 +0.5 3.0 L-threonine aldolase compare
Psyr_2389 +0.5 1.8 oxidoreductase, molybdopterin-binding subunit, putative compare
Psyr_2767 +0.5 1.0 Glycoside hydrolase, family 19 compare
Psyr_2543 +0.5 1.9 conserved hypothetical protein compare
Psyr_2028 +0.5 1.7 conserved hypothetical protein compare
Psyr_2327 +0.5 1.6 GTP cyclohydrolase subunit MoaA compare
Psyr_3018 +0.5 1.8 membrane protein, putative compare
Psyr_1185 +0.5 1.7 type III chaperone protein ShcM compare
Psyr_3095 +0.5 1.8 transport system permease protein compare
Psyr_3250 +0.5 2.0 Helix-turn-helix motif protein compare
Psyr_2392 +0.5 1.7 conserved hypothetical protein compare
Psyr_1330 +0.5 1.8 23S rRNA m(1)G-745 methyltransferase compare
Psyr_2051 +0.5 2.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3036 +0.5 1.5 transcriptional regulator, TetR family compare
Psyr_3855 +0.5 2.3 Beta-lactamase compare
Psyr_4232 +0.5 1.8 Protein of unknown function DUF541 compare
Psyr_3233 +0.5 1.5 FMN reductase compare
Psyr_0498 +0.5 1.2 Protein of unknown function DUF1445 compare
Psyr_4418 +0.5 1.2 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4580 +0.5 1.8 anthranilate phosphoribosyltransferase compare
Psyr_2359 +0.5 0.6 conserved hypothetical protein compare
Psyr_2676 +0.5 1.0 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_1843 +0.5 1.2 Protein of unknown function DUF1311 compare
Psyr_1761 +0.5 1.2 Hydroxyacylglutathione hydrolase compare
Psyr_2029 +0.5 1.8 Protein of unknown function UPF0118 compare
Psyr_2313 +0.5 3.1 peptidoglycan glycosyltransferase / cell elongation-specific peptidoglycan D,D-transpeptidase compare
Psyr_0502 +0.5 3.0 potassium/proton antiporter, CPA1 family compare
Psyr_1485 +0.5 2.7 hypothetical protein compare
Psyr_3918 +0.5 2.1 NUDIX hydrolase compare
Psyr_0436 +0.5 1.5 Phosphopantetheine-binding protein compare
Psyr_4222 +0.5 2.0 Protein of unknown function DUF81 compare
Psyr_3861 +0.5 1.2 Protein of unknown function DUF1145 compare
Psyr_4655 +0.5 2.0 hypothetical protein compare
Psyr_0670 +0.5 2.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_2088 +0.5 0.8 2-methylaconitate cis-trans isomerase compare
Psyr_2779 +0.5 1.5 Phage minor tail compare
Psyr_1270 +0.5 0.8 conserved hypothetical protein compare
Psyr_0626 +0.5 3.2 DedA compare
Psyr_2921 +0.5 1.3 ADP-ribosylglycohydrolase compare
Psyr_4445 +0.5 2.5 conserved hypothetical protein compare
Psyr_3196 +0.4 2.4 isocitrate lyase compare
Psyr_1821 +0.4 2.2 GCN5-related N-acetyltransferase compare
Psyr_0833 +0.4 1.8 conserved hypothetical protein compare
Psyr_2688 +0.4 1.9 conserved hypothetical protein compare
Psyr_1851 +0.4 2.3 conserved hypothetical protein compare
Psyr_0828 +0.4 0.8 ketopantoate hydroxymethyltransferase compare
Psyr_3662 +0.4 1.1 NAD(P)H dehydrogenase (quinone) compare
Psyr_0786 +0.4 2.7 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt compare
Psyr_1294 +0.4 1.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0986 +0.4 1.4 16S rRNA m(2)G 1207 methyltransferase compare
Psyr_3932 +0.4 0.6 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_2157 +0.4 2.3 Inosine/uridine-preferring nucleoside hydrolase compare
Psyr_1018 +0.4 1.6 Protein of unknown function DUF1244 compare
Psyr_2584 +0.4 2.0 IucA/IucC compare
Psyr_5033 +0.4 3.0 PAS/PAC sensor signal transduction histidine kinase compare
Psyr_4881 +0.4 1.6 RNA methyltransferase TrmH, group 2 compare
Psyr_1823 +0.4 1.9 Twin-arginine translocation pathway signal compare
Psyr_2756 +0.4 2.1 Molybdenum ABC transporter, periplasmic binding protein compare
Psyr_0726 +0.4 2.0 ribosomal large subunit pseudouridine synthase D compare
Psyr_1377 +0.4 1.8 CinA, C-terminal compare
Psyr_3779 +0.4 1.2 GCN5-related N-acetyltransferase compare
Psyr_2199 +0.4 0.9 Urease accessory protein UreF compare
Psyr_1822 +0.4 2.9 MscS Mechanosensitive ion channel compare
Psyr_3130 +0.4 1.4 Secretion protein HlyD compare
Psyr_2531 +0.4 1.5 transcriptional regulator, LysR family compare
Psyr_0354 +0.4 2.2 Acyl-CoA dehydrogenase, C-terminal compare
Psyr_4011 +0.4 1.1 Thiolase compare
Psyr_1210 +0.4 2.0 type III secretion protein HrcQa compare
Psyr_1295 +0.4 1.1 conserved domain protein compare
Psyr_2435 +0.4 1.6 Xylulokinase compare
Psyr_3624 +0.4 1.5 transcriptional regulator, LysR family compare
Psyr_0848 +0.4 2.9 ketol-acid reductoisomerase compare
Psyr_2402 +0.4 1.7 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_4153 +0.4 1.7 conserved hypothetical protein compare
Psyr_2493 +0.4 1.9 Major facilitator superfamily compare
Psyr_0156 +0.4 2.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2294 +0.4 1.1 conserved hypothetical protein compare
Psyr_2881 +0.4 1.8 xylellain, Cysteine peptidase, MEROPS family C01A compare
Psyr_3708 +0.4 2.4 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_5022 +0.4 2.5 conserved hypothetical protein compare
Psyr_3377 +0.4 0.7 transcriptional regulator, MarR family compare
Psyr_1820 +0.4 1.3 conserved hypothetical protein compare
Psyr_2876 +0.4 2.2 monosaccharide ABC transporter ATP-binding protein, CUT2 family compare
Psyr_1867 +0.4 2.4 conserved hypothetical protein compare
Psyr_1335 +0.4 1.9 Aminotransferase, class V compare
Psyr_0485 +0.4 2.0 Protein of unknown function DUF179 compare
Psyr_2108 +0.4 2.3 23S rRNA m(2)G-2445 methyltransferase compare
Psyr_1368 +0.4 2.1 Carboxylesterase compare
Psyr_2076 +0.4 1.7 UspA compare
Psyr_2410 +0.4 1.6 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_3761 +0.4 2.1 conserved hypothetical protein compare
Psyr_3166 +0.4 1.0 ABC transporter, periplasmic substrate-binding protein, putative compare
Psyr_0279 +0.4 1.3 lipoprotein, putative compare
Psyr_0277 +0.4 1.6 ABC transporter compare
Psyr_3271 +0.4 2.2 methylmalonate-semialdehyde dehydrogenase (acylating) compare
Psyr_1585 +0.4 2.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_3586 +0.4 1.3 Phosphoesterase PHP, N-terminal:PHP, C-terminal compare
Psyr_2877 +0.4 1.7 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_0950 +0.4 0.3 [protein release factor]-glutamine N5-methyltransferase compare
Psyr_3670 +0.4 1.9 Glutathione peroxidase compare
Psyr_2036 +0.4 2.3 Fimbrial protein compare
Psyr_3706 +0.4 1.8 Protein of unknown function DUF335 compare
Psyr_5026 +0.4 1.9 conserved hypothetical protein compare
Psyr_0772 +0.4 0.5 Protein of unknown function DUF1355 compare
Psyr_0909 +0.4 1.3 transcriptional regulator, LysR family compare
Psyr_2833 +0.4 0.5 CDS compare
Psyr_0219 +0.4 2.1 phosphomannomutase compare
Psyr_2937 +0.4 1.6 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_3027 +0.4 1.3 Protein kinase:Leucine-rich repeat protein compare
Psyr_2494 +0.4 1.6 conserved hypothetical protein compare
Psyr_1528 +0.4 1.0 Arc-like DNA binding protein compare
Psyr_1111 +0.4 1.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1019 +0.4 1.4 Dihydroneopterin aldolase compare
Psyr_4169 +0.4 1.5 4-carboxymuconolactone decarboxylase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Phloretin in Pseudomonas syringae pv. syringae B728a ΔmexB

For stress Phloretin across organisms