Experiment set1IT037 for Rhizobium sp. OAE497

Compare to:

Sodium succinate dibasic hexahydrate carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS06555 -5.7 -2.5 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS09545 -5.4 -2.8 anthranilate phosphoribosyltransferase compare
ABIE40_RS10720 -4.9 -2.5 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19330 -4.7 -3.3 phosphoribosylanthranilate isomerase compare
ABIE40_RS20440 -4.6 -2.6 cobalt-precorrin-6A reductase compare
ABIE40_RS05660 -4.4 -3.1 response regulator transcription factor compare
ABIE40_RS30700 -4.4 -1.1 hypothetical protein compare
ABIE40_RS09360 -4.1 -4.9 excinuclease ABC subunit UvrA compare
ABIE40_RS14985 -4.0 -2.0 glycosyltransferase compare
ABIE40_RS03405 -3.9 -2.5 anti-sigma factor compare
ABIE40_RS30285 -3.9 -1.0 co-chaperone GroES compare
ABIE40_RS08005 -3.9 -2.6 dihydroxy-acid dehydratase compare
ABIE40_RS00580 -3.6 -2.4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS18255 -3.6 -1.2 hypothetical protein compare
ABIE40_RS06560 -3.5 -6.1 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS09090 -3.5 -9.0 nitrogen regulation protein NR(I) compare
ABIE40_RS14980 -3.5 -5.3 glycoside hydrolase family 16 protein compare
ABIE40_RS13410 -3.5 -8.1 anthranilate synthase compare
ABIE40_RS29515 -3.4 -3.0 hypothetical protein compare
ABIE40_RS19480 -3.3 -3.2 DUF1402 family protein compare
ABIE40_RS20445 -3.3 -1.2 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS18880 -3.2 -12.3 UDP-glucose 4-epimerase GalE compare
ABIE40_RS08635 -3.1 -10.5 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS10200 -3.1 -1.7 Grx4 family monothiol glutaredoxin compare
ABIE40_RS17530 -3.0 -7.5 diaminopimelate decarboxylase compare
ABIE40_RS14955 -3.0 -9.7 sugar transferase compare
ABIE40_RS06270 -2.9 -8.2 amidophosphoribosyltransferase compare
ABIE40_RS06730 -2.8 -5.1 riboflavin synthase compare
ABIE40_RS29155 -2.8 -1.4 transport-associated protein compare
ABIE40_RS04215 -2.8 -3.0 sensor domain-containing phosphodiesterase compare
ABIE40_RS30510 -2.8 -1.4 CBS domain-containing protein compare
ABIE40_RS09980 -2.7 -2.0 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS17590 -2.7 -3.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS14990 -2.6 -8.8 glycosyltransferase family 2 protein compare
ABIE40_RS20430 -2.6 -2.9 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS03660 -2.6 -5.8 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS05665 -2.6 -3.6 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS20450 -2.5 -2.5 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS06050 -2.5 -4.9 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS05430 -2.5 -4.0 phosphoribosylamine--glycine ligase compare
ABIE40_RS19260 -2.4 -3.2 DNA polymerase III subunit epsilon compare
ABIE40_RS06725 -2.4 -5.8 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS16320 -2.3 -5.8 histidinol-phosphatase compare
ABIE40_RS12135 -2.3 -5.3 methionine synthase compare
ABIE40_RS19445 -2.2 -2.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS19365 -2.2 -3.0 double-strand break repair protein AddB compare
ABIE40_RS19360 -2.2 -4.8 double-strand break repair helicase AddA compare
ABIE40_RS09720 -2.2 -4.0 GTP cyclohydrolase I FolE compare
ABIE40_RS30720 -2.2 -1.5 hypothetical protein compare
ABIE40_RS20435 -2.2 -2.3 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS11495 -2.2 -5.2 acetolactate synthase 3 large subunit compare
ABIE40_RS09725 -2.2 -4.8 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS07805 -2.1 -2.3 hypothetical protein compare
ABIE40_RS05670 -2.1 -4.8 membrane protein compare
ABIE40_RS09540 -2.1 -5.4 peptidylprolyl isomerase compare
ABIE40_RS10180 -2.0 -3.0 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS09685 -2.0 -1.8 nitroreductase compare
ABIE40_RS27250 -2.0 -1.1 hypothetical protein compare
ABIE40_RS00370 -2.0 -2.0 type II toxin-antitoxin system HicA family toxin compare
ABIE40_RS30655 -2.0 -1.3 hypothetical protein compare
ABIE40_RS09095 -2.0 -2.2 PAS domain-containing sensor histidine kinase compare
ABIE40_RS16570 -2.0 -2.6 tetratricopeptide repeat protein compare
ABIE40_RS02725 -1.9 -4.4 histidinol dehydrogenase compare
ABIE40_RS16655 -1.9 -5.0 creatininase family protein compare
ABIE40_RS17010 -1.9 -5.7 sugar ABC transporter permease compare
ABIE40_RS19440 -1.9 -3.8 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS06565 -1.9 -2.2 AI-2E family transporter compare
ABIE40_RS11960 -1.9 -2.2 energy-dependent translational throttle protein EttA compare
ABIE40_RS01055 -1.9 -4.3 translation elongation factor 4 compare
ABIE40_RS28590 -1.8 -2.5 low affinity iron permease family protein compare
ABIE40_RS17650 -1.8 -3.0 cobaltochelatase subunit CobS compare
ABIE40_RS00490 -1.8 -7.0 DNA polymerase I compare
ABIE40_RS20455 -1.8 -1.5 precorrin-8X methylmutase compare
ABIE40_RS01765 -1.8 -3.8 [protein-PII] uridylyltransferase compare
ABIE40_RS07740 -1.8 -1.1 elongation factor Tu compare
ABIE40_RS00725 -1.7 -2.7 DNA cytosine methyltransferase compare
ABIE40_RS29180 -1.7 -1.3 FAD-dependent oxidoreductase compare
ABIE40_RS13220 -1.7 -2.7 hypothetical protein compare
ABIE40_RS09660 -1.7 -7.0 AI-2E family transporter compare
ABIE40_RS04115 -1.7 -1.1 ribonuclease HI compare
ABIE40_RS16070 -1.7 -2.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS16170 -1.7 -1.8 DUF882 domain-containing protein compare
ABIE40_RS18970 -1.7 -2.1 murein hydrolase activator EnvC compare
ABIE40_RS27160 -1.6 -0.8 low affinity iron permease family protein compare
ABIE40_RS08140 -1.6 -8.1 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS28235 -1.6 -1.4 WYL domain-containing protein compare
ABIE40_RS00200 -1.6 -4.1 DNA replication/repair protein RecF compare
ABIE40_RS02325 -1.6 -2.8 ornithine carbamoyltransferase compare
ABIE40_RS17000 -1.6 -3.5 ABC transporter ATP-binding protein compare
ABIE40_RS19455 -1.6 -1.5 DUF2628 domain-containing protein compare
ABIE40_RS11165 -1.6 -1.4 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS02320 -1.5 -3.5 aspartate aminotransferase family protein compare
ABIE40_RS20460 -1.5 -1.5 precorrin-3B synthase compare
ABIE40_RS05155 -1.5 -3.1 DUF5330 domain-containing protein compare
ABIE40_RS06930 -1.5 -3.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS19130 -1.5 -3.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS17595 -1.5 -3.8 histidinol-phosphate transaminase compare
ABIE40_RS18960 -1.5 -2.7 ribosome silencing factor compare
ABIE40_RS20315 -1.4 -0.9 type II toxin-antitoxin system VapB family antitoxin compare
ABIE40_RS11060 -1.4 -3.0 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS30225 -1.4 -2.2 hypothetical protein compare
ABIE40_RS23585 -1.4 -2.3 hypothetical protein compare
ABIE40_RS30865 -1.4 -1.3 CheR family methyltransferase compare
ABIE40_RS17005 -1.4 -5.0 carbohydrate ABC transporter permease compare
ABIE40_RS16280 -1.4 -2.2 hypothetical protein compare
ABIE40_RS26805 -1.4 -1.5 chaperone modulator CbpM compare
ABIE40_RS14370 -1.4 -1.8 DUF423 domain-containing protein compare
ABIE40_RS28295 -1.4 -1.8 hypothetical protein compare
ABIE40_RS19700 -1.4 -2.2 MBL fold metallo-hydrolase compare
ABIE40_RS19435 -1.4 -1.1 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS23445 -1.4 -7.1 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase compare
ABIE40_RS21855 -1.4 -1.4 CDP-alcohol phosphatidyltransferase family protein compare
ABIE40_RS01705 -1.4 -5.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS11875 -1.4 -1.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS19120 -1.4 -10.2 NAD-glutamate dehydrogenase compare
ABIE40_RS28105 -1.4 -1.4 hypothetical protein compare
ABIE40_RS10725 -1.3 -1.9 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS08640 -1.3 -1.1 hypothetical protein compare
ABIE40_RS13385 -1.3 -1.8 Isoquinoline 1-oxidoreductase subunit compare
ABIE40_RS19355 -1.3 -1.5 thioredoxin compare
ABIE40_RS00960 -1.3 -1.6 formyltetrahydrofolate deformylase compare
ABIE40_RS17015 -1.3 -4.1 sugar ABC transporter substrate-binding protein compare
ABIE40_RS29330 -1.3 -2.9 helix-turn-helix domain-containing protein compare
ABIE40_RS06700 -1.3 -2.9 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS19460 -1.3 -2.9 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS15920 -1.3 -0.5 50S ribosomal protein L31 compare
ABIE40_RS22660 -1.3 -1.9 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
ABIE40_RS10850 -1.3 -2.8 excinuclease ABC subunit UvrB compare
ABIE40_RS24615 -1.3 -3.7 potassium-transporting ATPase subunit KdpC compare
ABIE40_RS06750 -1.3 -2.8 6,7-dimethyl-8-ribityllumazine synthase compare
ABIE40_RS11905 -1.3 -2.4 DnaJ family molecular chaperone compare
ABIE40_RS28765 -1.2 -0.9 chemotaxis protein CheX compare
ABIE40_RS11155 -1.2 -4.1 cobaltochelatase subunit CobN compare
ABIE40_RS00640 -1.2 -1.8 hypothetical protein compare
ABIE40_RS22085 -1.2 -1.0 putative quinol monooxygenase compare
ABIE40_RS13835 -1.2 -1.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase compare
ABIE40_RS11175 -1.2 -2.4 cobyric acid synthase compare
ABIE40_RS06775 -1.2 -1.1 DUF177 domain-containing protein compare
ABIE40_RS08645 -1.2 -3.1 LL-diaminopimelate aminotransferase compare
ABIE40_RS30550 -1.1 -2.4 DUF2243 domain-containing protein compare
ABIE40_RS24690 -1.1 -1.5 transcriptional regulator NanR compare
ABIE40_RS18640 -1.1 -4.5 M48 family metalloprotease compare
ABIE40_RS25995 -1.1 -2.4 ABC transporter ATP-binding protein compare
ABIE40_RS25185 -1.1 -3.4 sugar-binding transcriptional regulator compare
ABIE40_RS18735 -1.1 -3.2 TetR/AcrR family transcriptional regulator compare
ABIE40_RS10155 -1.1 -0.9 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS09400 -1.1 -2.1 hypothetical protein compare
ABIE40_RS00760 -1.1 -2.2 hypothetical protein compare
ABIE40_RS27480 -1.1 -1.5 response regulator compare
ABIE40_RS15770 -1.1 -1.4 DUF2945 domain-containing protein compare
ABIE40_RS29945 -1.1 -1.3 hypothetical protein compare
ABIE40_RS04010 -1.1 -2.3 RT0821/Lpp0805 family surface protein compare
ABIE40_RS11095 -1.1 -2.5 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS18285 -1.1 -2.6 heme exporter protein CcmB compare
ABIE40_RS20465 -1.1 -1.8 precorrin-6A synthase (deacetylating) compare
ABIE40_RS30735 -1.1 -1.9 ATP-binding cassette domain-containing protein compare
ABIE40_RS03975 -1.1 -4.6 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
ABIE40_RS28485 -1.1 -1.0 hypothetical protein compare
ABIE40_RS27835 -1.1 -2.3 lipocalin family protein compare
ABIE40_RS29780 -1.0 -1.3 hypothetical protein compare
ABIE40_RS19450 -1.0 -2.7 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS26970 -1.0 -2.4 response regulator compare
ABIE40_RS09085 -1.0 -3.1 nitrogen regulation protein NR(II) compare
ABIE40_RS12360 -1.0 -4.8 DUF5131 family protein compare
ABIE40_RS26290 -1.0 -0.7 SDR family oxidoreductase compare
ABIE40_RS15020 -1.0 -2.6 Rrf2 family transcriptional regulator compare
ABIE40_RS10425 -1.0 -2.5 ABC transporter ATP-binding protein compare
ABIE40_RS13085 -1.0 -2.2 GNAT family N-acetyltransferase compare
ABIE40_RS05365 -1.0 -2.9 tetratricopeptide repeat protein compare
ABIE40_RS02905 -1.0 -1.1 hypothetical protein compare
ABIE40_RS19415 -1.0 -5.2 phosphoenolpyruvate carboxykinase compare
ABIE40_RS24760 -1.0 -1.8 DeoR/GlpR family DNA-binding transcription regulator compare
ABIE40_RS05735 -1.0 -0.9 hypothetical protein compare
ABIE40_RS02345 -0.9 -1.2 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS03685 -0.9 -0.9 hypothetical protein compare
ABIE40_RS10390 -0.9 -0.9 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS00680 -0.9 -2.0 helix-turn-helix domain-containing protein compare
ABIE40_RS15345 -0.9 -3.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS16985 -0.9 -4.4 FGGY-family carbohydrate kinase compare
ABIE40_RS10215 -0.9 -1.0 DUF982 domain-containing protein compare
ABIE40_RS04305 -0.9 -1.2 Arc family DNA-binding protein compare
ABIE40_RS18685 -0.9 -2.0 beta-ketoacyl-ACP reductase compare
ABIE40_RS28560 -0.9 -2.8 cytochrome c oxidase subunit II compare
ABIE40_RS30315 -0.9 -0.8 hypothetical protein compare
ABIE40_RS30045 -0.9 -2.4 hypothetical protein compare
ABIE40_RS25625 -0.9 -2.9 glutathione S-transferase compare
ABIE40_RS24995 -0.9 -1.4 hypothetical protein compare
ABIE40_RS27175 -0.9 -1.6 hypothetical protein compare
ABIE40_RS16505 -0.9 -2.3 MaoC family dehydratase compare
ABIE40_RS14750 -0.9 -1.7 flagellar export protein FliJ compare
ABIE40_RS15620 -0.9 -1.2 tol-pal system-associated acyl-CoA thioesterase compare
ABIE40_RS28615 -0.9 -2.0 transposase compare
ABIE40_RS29835 -0.9 -0.6 transposase compare
ABIE40_RS13130 -0.9 -3.5 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS16210 -0.9 -3.7 homospermidine synthase compare
ABIE40_RS20765 -0.9 -1.1 crotonase/enoyl-CoA hydratase family protein compare
ABIE40_RS22305 -0.9 -1.6 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE40_RS03665 -0.9 -2.1 ATP phosphoribosyltransferase compare
ABIE40_RS28785 -0.9 -0.7 ABC-three component system middle component 1 compare
ABIE40_RS25500 -0.9 -0.6 type II toxin-antitoxin system ParD family antitoxin compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium succinate dibasic hexahydrate in Rhizobium sp. OAE497

For carbon source Sodium succinate dibasic hexahydrate across organisms