Experiment set1IT032 for Enterobacter asburiae PDN3

Compare to:

MS_media no stress control

200 most important genes:

  gene name fitness t score description  
EX28DRAFT_2635 -6.4 -10.7 Fructose-2,6-bisphosphatase compare
EX28DRAFT_2585 -5.3 -2.4 pyrroline-5-carboxylate reductase compare
EX28DRAFT_2027 -4.6 -3.1 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) compare
EX28DRAFT_4350 -3.9 -1.0 nitrogen regulation protein NR(I) compare
EX28DRAFT_2651 -3.8 -6.7 glutamate 5-kinase compare
EX28DRAFT_4418 -3.7 -10.1 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) compare
EX28DRAFT_0936 -3.4 -7.9 anthranilate synthase, component I (EC 4.1.3.27) compare
EX28DRAFT_3669 -3.4 -6.4 3-isopropylmalate dehydrogenase compare
EX28DRAFT_1986 -3.3 -1.2 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
EX28DRAFT_2252 -3.3 -2.3 TolA protein compare
EX28DRAFT_2632 -3.3 -11.2 Major Facilitator Superfamily compare
EX28DRAFT_1374 -3.3 -1.7 Short-chain dehydrogenases of various substrate specificities compare
EX28DRAFT_2916 -3.2 -8.8 diaminopimelate decarboxylase compare
EX28DRAFT_0934 -3.2 -11.4 indole-3-glycerol phosphate synthase (EC 4.1.1.48) compare
EX28DRAFT_3754 -3.2 -1.2 UTP--GlnB (protein PII) uridylyltransferase, GlnD compare
EX28DRAFT_4153 -3.1 -2.5 3-dehydroquinate synthase (EC 4.2.3.4) compare
EX28DRAFT_4544 -3.1 -0.8 phosphoribosylamine--glycine ligase (EC 6.3.4.13) compare
EX28DRAFT_2650 -3.1 -7.0 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) compare
EX28DRAFT_0537 -3.1 -10.8 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) compare
EX28DRAFT_0933 -3.0 -10.2 tryptophan synthase, beta subunit compare
EX28DRAFT_0538 -3.0 -8.5 histidinol-phosphate aminotransferase compare
EX28DRAFT_0533 -3.0 -5.4 phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)/phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) compare
EX28DRAFT_4421 -2.9 -0.7 N-acetylglutamate kinase (EC 2.7.2.8) compare
EX28DRAFT_4493 -2.9 -5.7 Transcriptional regulator compare
EX28DRAFT_3668 -2.7 -8.7 3-isopropylmalate dehydratase, large subunit compare
EX28DRAFT_3730 -2.7 -4.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
EX28DRAFT_4443 -2.7 -8.6 dihydroxy-acid dehydratase compare
EX28DRAFT_2851 -2.7 -3.1 phosphoadenosine phosphosulfate reductase, thioredoxin dependent compare
EX28DRAFT_2272 -2.6 -9.7 citrate synthase (EC 2.3.3.1) compare
EX28DRAFT_2270 -2.6 -1.2 succinate dehydrogenase subunit C (EC 1.3.5.1) compare
EX28DRAFT_3276 -2.6 -4.7 glutamate synthase small subunit family protein, proteobacterial compare
EX28DRAFT_0540 -2.6 -6.1 ATP phosphoribosyltransferase compare
EX28DRAFT_2893 -2.6 -4.5 N-acetylglutamate synthase (EC 2.3.1.1) compare
EX28DRAFT_3728 -2.6 -2.8 L-aspartate 1-decarboxylase (EC 4.1.1.11) compare
EX28DRAFT_4419 -2.5 -2.0 acetylornithine deacetylase (ArgE) compare
EX28DRAFT_3224 -2.5 -4.2 argininosuccinate synthase (EC 6.3.4.5) compare
EX28DRAFT_2701 -2.5 -6.6 chorismate mutase (EC 5.4.99.5) compare
EX28DRAFT_0535 -2.5 -4.0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) compare
EX28DRAFT_1719 -2.4 -1.6 integration host factor, alpha subunit compare
EX28DRAFT_3275 -2.4 -10.6 Glutamate synthase domain 2 compare
EX28DRAFT_4297 -2.4 -1.5 cell division ATP-binding protein FtsE compare
EX28DRAFT_0935 -2.4 -5.2 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
EX28DRAFT_4422 -2.4 -4.7 argininosuccinate lyase compare
EX28DRAFT_3614 -2.4 -6.3 aspartate kinase (EC 2.7.2.4) compare
EX28DRAFT_0536 -2.3 -2.2 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare
EX28DRAFT_2917 -2.3 -5.5 Transcriptional regulator compare
EX28DRAFT_2265 -2.3 -0.8 2-oxoglutarate dehydrogenase E2 component (EC 2.3.1.61) compare
EX28DRAFT_4292 -2.3 -6.0 Acetyltransferase (GNAT) domain compare
EX28DRAFT_1121 -2.2 -2.8 Sugar kinases, ribokinase family compare
EX28DRAFT_3667 -2.2 -2.8 3-isopropylmalate dehydratase, small subunit compare
EX28DRAFT_4331 -2.2 -7.3 homoserine O-succinyltransferase (EC 2.3.1.46) compare
EX28DRAFT_3670 -2.1 -6.7 2-isopropylmalate synthase (EC 2.3.3.13) compare
EX28DRAFT_4446 -2.1 -6.9 ketol-acid reductoisomerase (EC 1.1.1.86) compare
EX28DRAFT_4444 -2.1 -6.1 threonine ammonia-lyase, biosynthetic, long form compare
EX28DRAFT_0932 -2.1 -2.9 tryptophan synthase, alpha chain (EC 4.2.1.20) compare
EX28DRAFT_2546 -2.1 -7.1 2-dehydropantoate 2-reductase compare
EX28DRAFT_4507 -2.1 -6.3 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases compare
EX28DRAFT_0272 -2.1 -1.6 phosphohistidine phosphatase, SixA compare
EX28DRAFT_0534 -2.0 -3.5 imidazoleglycerol phosphate synthase, cyclase subunit compare
EX28DRAFT_4478 -2.0 -3.6 diaminopimelate epimerase (EC 5.1.1.7) compare
EX28DRAFT_0539 -2.0 -4.6 histidinol dehydrogenase compare
EX28DRAFT_3729 -2.0 -6.0 pantoate--beta-alanine ligase compare
EX28DRAFT_4445 -2.0 -5.1 Transcriptional regulator compare
EX28DRAFT_0111 -1.9 -2.0 FeS cluster assembly scaffold IscU compare
EX28DRAFT_4271 -1.9 -1.0 glycerol-3-phosphate acyltransferase (EC 2.3.1.15) compare
EX28DRAFT_2043 -1.8 -6.6 transcriptional regulator, AsnC family compare
EX28DRAFT_4420 -1.8 -0.6 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) compare
EX28DRAFT_3046 -1.7 -7.6 cystathionine beta-lyase, bacterial compare
EX28DRAFT_3879 -1.7 -4.2 Glycosyltransferase compare
EX28DRAFT_2271 -1.7 -4.3 hypothetical protein compare
EX28DRAFT_2633 -1.7 -2.8 Uncharacterised nucleotidyltransferase compare
EX28DRAFT_0190 -1.6 -1.6 transcriptional regulator, Spx/MgsR family compare
EX28DRAFT_1123 -1.6 -6.7 PTS system, sucrose-specific IIBC component compare
EX28DRAFT_4452 -1.6 -2.0 thioredoxin compare
EX28DRAFT_3671 -1.5 -2.9 RNA compare
EX28DRAFT_3883 -1.5 -4.1 Glycosyltransferases involved in cell wall biogenesis compare
EX28DRAFT_3070 -1.5 -1.7 Predicted phosphohydrolases compare
EX28DRAFT_0291 -1.5 -1.7 Uncharacterized membrane protein, required for colicin V production compare
EX28DRAFT_2699 -1.5 -3.4 chorismate mutase (EC 5.4.99.5) compare
EX28DRAFT_2634 -1.4 -4.9 hypothetical protein compare
EX28DRAFT_0292 -1.4 -1.1 amidophosphoribosyltransferase (EC 2.4.2.14) compare
EX28DRAFT_3285 -1.4 -5.2 malate dehydrogenase (NAD) (EC 1.1.1.37) compare
EX28DRAFT_0494 -1.4 -1.0 Protein-tyrosine-phosphatase compare
EX28DRAFT_3461 -1.4 -2.0 ornithine carbamoyltransferase compare
EX28DRAFT_0526 -1.4 -2.4 hypothetical protein compare
EX28DRAFT_4505 -1.4 -3.0 transcription elongation factor/antiterminator RfaH compare
EX28DRAFT_4280 -1.4 -1.2 Protein of unknown function (DUF2756) compare
EX28DRAFT_3613 -1.4 -2.8 RNA compare
EX28DRAFT_4170 -1.3 -6.8 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family compare
EX28DRAFT_4156 -1.3 -1.3 ribulose-phosphate 3-epimerase compare
EX28DRAFT_4341 -1.3 -2.4 Protein-disulfide isomerase compare
EX28DRAFT_2846 -1.2 -4.2 adenylyl-sulfate kinase compare
EX28DRAFT_4411 -1.2 -5.8 cystathionine gamma-synthase (EC 2.5.1.48) compare
EX28DRAFT_3710 -1.2 -4.4 pyruvate dehydrogenase E1 component, homodimeric type compare
EX28DRAFT_0125 -1.2 -0.7 nucleoside diphosphate kinase (EC 2.7.4.6) compare
EX28DRAFT_0167 -1.2 -1.3 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
EX28DRAFT_1128 -1.2 -1.7 hypothetical protein compare
EX28DRAFT_0531 -1.2 -4.8 Nucleoside-diphosphate-sugar epimerases compare
EX28DRAFT_2216 -1.1 -5.2 biotin synthase (EC 2.8.1.6) compare
EX28DRAFT_0545 -1.1 -3.0 Exodeoxyribonuclease I subunit C (EC 3.1.11.1) compare
EX28DRAFT_0328 -1.1 -1.5 NADH:ubiquinone oxidoreductase subunit 1 (chain H) compare
EX28DRAFT_1122 -1.1 -4.8 Maltoporin (phage lambda and maltose receptor) compare
EX28DRAFT_0330 -1.1 -3.1 NADH:ubiquinone oxidoreductase subunit 6 (chain J) compare
EX28DRAFT_0181 -1.1 -4.2 Glycine cleavage system regulatory protein compare
EX28DRAFT_0092 -1.1 -0.5 phosphoribosylformylglycinamidine synthase, single chain form compare
EX28DRAFT_0076 -1.1 -3.4 elongation factor 4 compare
EX28DRAFT_0069 -1.1 -1.9 Superfamily II DNA and RNA helicases compare
EX28DRAFT_1383 -1.1 -1.5 Uncharacterized protein conserved in bacteria compare
EX28DRAFT_0321 -1.0 -0.8 NADH:ubiquinone oxidoreductase subunit 3 (chain A) compare
EX28DRAFT_2958 -1.0 -1.3 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family compare
EX28DRAFT_2541 -1.0 -1.2 cytochrome o ubiquinol oxidase, subunit III compare
EX28DRAFT_1124 -1.0 -7.0 sucrose-6-phosphate hydrolase compare
EX28DRAFT_4386 -1.0 -2.0 Signal transduction histidine kinase compare
EX28DRAFT_0897 -1.0 -0.8 P2-like prophage tail protein X compare
EX28DRAFT_2267 -1.0 -4.5 succinate dehydrogenase and fumarate reductase iron-sulfur protein compare
EX28DRAFT_2492 -1.0 -2.5 Protein of unknown function (DUF2496) compare
EX28DRAFT_0374 -1.0 -1.1 Uncharacterized protein conserved in bacteria compare
EX28DRAFT_2853 -1.0 -3.9 sulfite reductase [NADPH] flavoprotein, alpha-component compare
EX28DRAFT_0001 -1.0 -2.0 Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain compare
EX28DRAFT_2540 -1.0 -3.8 cytochrome o ubiquinol oxidase, subunit I compare
EX28DRAFT_1877 -0.9 -1.9 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase compare
EX28DRAFT_0523 -0.9 -0.8 Glycosyltransferase like family 2 compare
EX28DRAFT_3082 -0.9 -2.8 Uncharacterized conserved protein compare
EX28DRAFT_0541 -0.9 -1.1 RNA compare
EX28DRAFT_1740 -0.9 -0.8 Phosphotransferase system cellobiose-specific component IIA compare
EX28DRAFT_0725 -0.9 -1.3 Activator of osmoprotectant transporter ProP compare
EX28DRAFT_3401 -0.9 -0.8 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
EX28DRAFT_2938 -0.9 -1.5 tRNA compare
EX28DRAFT_0861 -0.9 -2.4 Response regulator receiver domain compare
EX28DRAFT_2702 -0.9 -2.3 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) compare
EX28DRAFT_2074 -0.9 -1.6 type II secretion system protein I compare
EX28DRAFT_2240 -0.9 -1.7 phosphoglycerate mutase, BPG-dependent, family 1 compare
EX28DRAFT_3453 -0.9 -1.0 YhcH/YjgK/YiaL family protein compare
EX28DRAFT_3410 -0.9 -1.5 hypothetical protein compare
EX28DRAFT_2531 -0.9 -1.6 endopeptidase La compare
EX28DRAFT_4085 -0.9 -4.5 Predicted xylanase/chitin deacetylase compare
EX28DRAFT_4318 -0.8 -1.7 Glucose-6-phosphate isomerase compare
EX28DRAFT_1396 -0.8 -0.9 Amidases related to nicotinamidase compare
EX28DRAFT_4296 -0.8 -2.4 putative protein insertion permease FtsX compare
EX28DRAFT_3616 -0.8 -1.5 threonine synthase compare
EX28DRAFT_1841 -0.8 -1.0 Predicted metal-binding, possibly nucleic acid-binding protein compare
EX28DRAFT_2543 -0.8 -3.4 protoheme IX farnesyltransferase compare
EX28DRAFT_2268 -0.8 -3.4 succinate dehydrogenase subunit A (EC 1.3.5.1) compare
EX28DRAFT_2852 -0.8 -4.0 sulfite reductase (NADPH) hemoprotein, beta-component compare
EX28DRAFT_4440 -0.8 -2.7 acetolactate synthase, large subunit (EC 2.2.1.6) compare
EX28DRAFT_1050 -0.8 -1.5 luciferase family oxidoreductase, group 1 compare
EX28DRAFT_3259 -0.8 -3.2 Predicted P-loop-containing kinase compare
EX28DRAFT_0214 -0.8 -2.1 cysteine synthase A compare
EX28DRAFT_0948 -0.8 -1.2 hypothetical protein compare
EX28DRAFT_3626 -0.8 -1.6 RNA compare
EX28DRAFT_3244 -0.8 -1.3 Predicted transcriptional regulator, BolA superfamily compare
EX28DRAFT_4351 -0.8 -2.0 Signal transduction histidine kinase, nitrogen specific compare
EX28DRAFT_3058 -0.8 -0.9 Signal transduction histidine kinase compare
EX28DRAFT_0726 -0.8 -2.1 C-terminal peptidase (prc) compare
EX28DRAFT_2945 -0.8 -1.2 tyrosine recombinase XerD compare
EX28DRAFT_4349 -0.8 -0.9 hypothetical protein compare
EX28DRAFT_3311 -0.8 -0.9 ribosomal protein L11 methyltransferase compare
EX28DRAFT_3041 -0.7 -2.3 hypothetical protein compare
EX28DRAFT_4442 -0.7 -2.2 branched-chain amino acid aminotransferase, group I compare
EX28DRAFT_0952 -0.7 -2.2 Predicted membrane protein compare
EX28DRAFT_2964 -0.7 -2.4 5,10-methenyltetrahydrofolate synthetase compare
EX28DRAFT_0068 -0.7 -1.0 autonomous glycyl radical cofactor GrcA compare
EX28DRAFT_0521 -0.7 -3.0 Nucleoside-diphosphate-sugar epimerases compare
EX28DRAFT_3253 -0.7 -1.4 Uncharacterized protein conserved in bacteria compare
EX28DRAFT_3368 -0.7 -0.7 tRNA dimethylallyltransferase compare
EX28DRAFT_4155 -0.7 -1.7 DNA adenine methylase (dam) compare
EX28DRAFT_4380 -0.7 -0.7 Protein of unknown function (DUF1471) compare
EX28DRAFT_2974 -0.7 -3.9 transketolase, bacterial and yeast compare
EX28DRAFT_4184 -0.7 -0.6 Uncharacterized protein conserved in bacteria compare
EX28DRAFT_4436 -0.7 -2.3 Transcriptional regulator compare
EX28DRAFT_3278 -0.7 -1.5 Glutathione S-transferase compare
EX28DRAFT_3129 -0.7 -1.9 transcriptional regulator, TraR/DksA family compare
EX28DRAFT_3315 -0.7 -1.0 Protein of unknown function (DUF2556) compare
EX28DRAFT_3880 -0.7 -5.3 Glycosyltransferase compare
EX28DRAFT_1402 -0.7 -1.3 Glyoxalase-like domain compare
EX28DRAFT_0118 -0.7 -2.4 SseB protein C-terminal domain/SseB protein N-terminal domain compare
EX28DRAFT_3426 -0.7 -0.7 conserved hypothetical protein EF_0831/AHA_3912 compare
EX28DRAFT_2539 -0.7 -2.5 cytochrome o ubiquinol oxidase subunit II compare
EX28DRAFT_0857 -0.7 -0.8 tRNA compare
EX28DRAFT_2946 -0.7 -2.5 flavodoxin, long chain compare
EX28DRAFT_3302 -0.7 -4.5 diguanylate cyclase (GGDEF) domain compare
EX28DRAFT_3675 -0.7 -3.1 transcriptional regulator, LacI family compare
EX28DRAFT_0529 -0.7 -2.2 6-phosphogluconate dehydrogenase (decarboxylating) compare
EX28DRAFT_3864 -0.7 -3.5 Membrane-bound metallopeptidase compare
EX28DRAFT_0621 -0.7 -1.4 flagellar biosynthetic protein FliS compare
EX28DRAFT_2386 -0.6 -3.8 transcriptional regulator, TetR family compare
EX28DRAFT_2848 -0.6 -4.0 sulfate adenylyltransferase, small subunit compare
EX28DRAFT_0327 -0.6 -3.9 NADH-quinone oxidoreductase, chain G compare
EX28DRAFT_1430 -0.6 -1.4 Uncharacterized protein conserved in bacteria compare
EX28DRAFT_0132 -0.6 -1.9 outer membrane assembly lipoprotein YfgL compare
EX28DRAFT_1283 -0.6 -0.8 hypothetical protein compare
EX28DRAFT_1845 -0.6 -1.2 RNA compare
EX28DRAFT_1834 -0.6 -2.1 beta-ketoacyl-acyl-carrier-protein synthase II compare
EX28DRAFT_3418 -0.6 -0.6 Bacterial regulatory helix-turn-helix protein, lysR family compare
EX28DRAFT_2269 -0.6 -3.3 succinate dehydrogenase, hydrophobic membrane anchor protein compare
EX28DRAFT_1881 -0.6 -4.0 Membrane glycosyltransferase compare
EX28DRAFT_3724 -0.6 -1.6 ABC-type multidrug transport system, ATPase component compare
EX28DRAFT_4023 -0.6 -4.8 potassium uptake protein compare
EX28DRAFT_1941 -0.6 -0.9 Protein of unknown function (DUF4089) compare
EX28DRAFT_3377 -0.6 -2.0 rRNA methylase, putative, group 3 compare


Specific Phenotypes

None in this experiment

For Enterobacter asburiae PDN3 in no stress control experiments