Experiment set1IT032 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

marine broth with Cisplatin 0.025 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Echvi_1804 +4.2 28.0 Outer membrane lipoprotein-sorting protein compare
Echvi_1833 +3.3 23.7 3-deoxy-D-manno-octulosonic-acid transferase compare
Echvi_3052 +3.2 18.2 3-deoxy-D-manno-octulosonate cytidylyltransferase compare
Echvi_2131 +3.2 18.6 3-deoxy-8-phosphooctulonate synthase compare
Echvi_0165 +2.9 15.0 KpsF/GutQ family protein compare
Echvi_0986 +2.8 14.6 Rrf2 family protein compare
Echvi_4075 +2.7 17.6 hypothetical protein compare
Echvi_2958 +2.6 19.3 amino acid/peptide transporter (Peptide:H+ symporter), bacterial compare
Echvi_3292 +2.4 2.7 hypothetical protein compare
Echvi_2978 +2.2 4.7 Predicted deacylase compare
Echvi_3704 +2.0 12.8 hypothetical protein compare
Echvi_2253 +2.0 13.0 hypothetical protein compare
Echvi_3703 +2.0 10.1 hypothetical protein compare
Echvi_3904 +2.0 13.4 hypothetical protein compare
Echvi_3702 +1.9 11.8 von Willebrand factor type A domain. compare
Echvi_2254 +1.9 12.2 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) compare
Echvi_1517 +1.9 16.2 hypothetical protein compare
Echvi_0622 +1.9 14.6 gliding motility-associated protein GldL compare
Echvi_0299 +1.9 15.3 gliding motility-associated ABC transporter permease protein GldF compare
Echvi_2252 +1.9 10.5 Mg-chelatase subunit ChlD compare
Echvi_1557 +1.8 12.0 MoxR-like ATPases compare
Echvi_0620 +1.8 14.6 gliding motility associated protien GldN compare
Echvi_0623 +1.8 16.2 gliding motility-associated lipoprotein GldK compare
Echvi_0300 +1.8 12.6 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
Echvi_3043 +1.7 8.2 Peroxiredoxin compare
Echvi_3905 +1.7 9.0 hypothetical protein compare
Echvi_0621 +1.7 15.6 gliding motility-associated protein GldM compare
Echvi_1489 +1.7 12.2 UDP-N-acetylglucosamine 2-epimerase compare
Echvi_0298 +1.6 12.7 gliding-associated putative ABC transporter substrate-binding component GldG compare
Echvi_0169 +1.6 14.4 hypothetical protein compare
Echvi_0024 +1.6 8.4 Protein of unknown function (DUF1684). compare
Echvi_3291 +1.6 5.3 Predicted membrane protein compare
Echvi_1319 +1.5 13.6 gliding motility-associated lipoprotein GldB compare
Echvi_2428 +1.5 4.4 iojap-like ribosome-associated protein compare
Echvi_0007 +1.4 6.3 Cytochrome c, mono- and diheme variants compare
Echvi_1224 +1.4 11.8 gliding motility-associated lipoprotein GldD compare
Echvi_2824 +1.4 11.9 hypothetical protein compare
Echvi_4392 +1.4 12.6 Glycosyltransferases involved in cell wall biogenesis compare
Echvi_0676 +1.4 8.8 Predicted glycosyltransferases compare
Echvi_4400 +1.3 11.7 nucleotide sugar dehydrogenase compare
Echvi_1311 +1.3 11.4 gliding motility-associated lipoprotein GldJ compare
Echvi_1821 +1.3 10.8 hypothetical protein compare
Echvi_2108 +1.3 2.8 Predicted small integral membrane protein compare
Echvi_3906 +1.3 5.9 hypothetical protein compare
Echvi_1812 +1.3 4.7 membrane protein, MarC family compare
Echvi_3683 +1.3 4.1 gliding motility-associated protein GldC compare
Echvi_3289 +1.3 5.5 Predicted transcriptional regulator compare
Echvi_1850 +1.3 8.2 Bacterial SH3 domain. compare
Echvi_3381 +1.2 11.5 Pregnancy-associated plasma protein-A. compare
Echvi_0655 +1.2 8.9 hypothetical protein compare
Echvi_4083 +1.2 11.6 hypothetical protein compare
Echvi_0596 +1.2 4.1 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_0674 +1.2 10.4 hypothetical protein compare
Echvi_1250 +1.1 2.7 hypothetical protein compare
Echvi_3380 +1.1 2.5 Uncharacterized protein conserved in bacteria compare
Echvi_4622 +1.1 6.7 hypothetical protein compare
Echvi_0652 +1.1 5.8 Outer membrane protein compare
Echvi_4594 +1.1 7.1 Xaa-Pro aminopeptidase compare
Echvi_1196 +1.1 1.6 triosephosphate isomerase compare
Echvi_4069 +1.1 4.6 Enoyl-CoA hydratase/carnithine racemase compare
Echvi_2524 +1.1 2.8 CRISPR-associated endoribonuclease Cas6 compare
Echvi_3045 +1.1 5.7 hypothetical protein compare
Echvi_0796 +1.0 2.2 hypothetical protein compare
Echvi_4621 +1.0 5.4 hypothetical protein compare
Echvi_1520 +1.0 4.1 Thioredoxin-like proteins and domains compare
Echvi_2084 +1.0 8.7 Uncharacterized protein conserved in bacteria compare
Echvi_2586 +0.9 1.6 hypothetical protein compare
Echvi_4398 +0.9 5.7 GDP-mannose 4,6-dehydratase compare
Echvi_4210 +0.9 7.2 RND family efflux transporter, MFP subunit compare
Echvi_0092 +0.9 3.3 Phosphosulfolactate phosphohydrolase and related enzymes compare
Echvi_0589 +0.9 4.0 hypothetical protein compare
Echvi_3717 +0.9 7.3 Outer membrane protein/protective antigen OMA87 compare
Echvi_4209 +0.9 4.9 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_3046 +0.9 4.3 hypothetical protein compare
Echvi_4393 +0.8 7.0 Glycosyltransferase compare
Echvi_4020 +0.8 3.9 hypothetical protein compare
Echvi_0624 +0.8 5.7 Bacteroidetes-specific putative membrane protein compare
Echvi_4631 +0.8 6.6 (p)ppGpp synthetase, RelA/SpoT family compare
Echvi_1334 +0.8 5.4 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II compare
Echvi_0359 +0.8 3.6 hypothetical protein compare
Echvi_4021 +0.8 4.0 Cytochrome c peroxidase compare
Echvi_1607 +0.8 1.2 Acylphosphatases compare
Echvi_4640 +0.8 1.5 hypothetical protein compare
Echvi_0626 +0.8 5.2 hypothetical protein compare
Echvi_0006 +0.8 3.4 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Echvi_3313 +0.8 2.7 hypothetical protein compare
Echvi_4391 +0.8 7.2 Nucleoside-diphosphate-sugar epimerases compare
Echvi_3972 +0.8 2.6 hypothetical protein compare
Echvi_1181 +0.8 5.2 Uridine kinase compare
Echvi_1061 +0.8 1.7 hypothetical protein compare
Echvi_4582 +0.8 1.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_4023 +0.8 3.7 Cytochrome c peroxidase compare
Echvi_4211 +0.8 6.9 heavy metal efflux pump (cobalt-zinc-cadmium) compare
Echvi_4022 +0.8 3.1 hypothetical protein compare
Echvi_0617 +0.8 6.5 hypothetical protein compare
Echvi_1175 +0.7 5.9 Chloride channel protein EriC compare
Echvi_1115 +0.7 1.7 hypothetical protein compare
Echvi_2445 +0.7 5.5 PAS domain S-box compare
Echvi_0939 +0.7 2.7 Predicted metal-dependent phosphoesterases (PHP family) compare
Echvi_1732 +0.7 1.4 hypothetical protein compare
Echvi_2130 +0.7 3.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Echvi_0767 +0.7 2.1 hypothetical protein compare
Echvi_4024 +0.7 3.1 hypothetical protein compare
Echvi_1211 +0.7 4.7 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain compare
Echvi_3912 +0.7 5.0 SusD family. compare
Echvi_3005 +0.7 4.4 hypothetical protein compare
Echvi_1764 +0.7 2.5 hypothetical protein compare
Echvi_0845 +0.7 2.8 hypothetical protein compare
Echvi_3824 +0.7 2.2 hypothetical protein compare
Echvi_4208 +0.7 5.1 Signal transduction histidine kinase compare
Echvi_1020 +0.7 0.9 hypothetical protein compare
Echvi_0691 +0.7 6.1 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases compare
Echvi_3283 +0.7 1.7 Lactoylglutathione lyase and related lyases compare
Echvi_0583 +0.7 2.5 Pseudouridylate synthases, 23S RNA-specific compare
Echvi_3888 +0.6 4.5 Uncharacterized conserved protein compare
Echvi_3521 +0.6 5.6 Methyltransferase domain. compare
Echvi_1760 +0.6 2.2 preprotein translocase, YajC subunit compare
Echvi_3376 +0.6 2.7 O-6-methylguanine DNA methyltransferase compare
Echvi_2862 +0.6 2.3 glucose-6-phosphate 1-dehydrogenase compare
Echvi_2393 +0.6 1.3 uracil-DNA glycosylase compare
Echvi_1758 +0.6 2.7 Gas vesicle protein compare
Echvi_3913 +0.6 4.9 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_2191 +0.6 3.8 hypothetical protein compare
Echvi_3870 +0.6 1.0 hypothetical protein compare
Echvi_0641 +0.6 0.8 Transposase and inactivated derivatives compare
Echvi_0728 +0.6 1.5 hypothetical protein compare
Echvi_3312 +0.6 1.7 hypothetical protein compare
Echvi_0996 +0.6 4.5 conserved hypothetical protein compare
Echvi_1795 +0.6 2.8 hypothetical protein compare
Echvi_4252 +0.6 2.6 hypothetical protein compare
Echvi_1259 +0.6 1.6 methionine-R-sulfoxide reductase compare
Echvi_0086 +0.6 4.3 Glycosyltransferases, probably involved in cell wall biogenesis compare
Echvi_3472 +0.6 3.6 Universal stress protein UspA and related nucleotide-binding proteins compare
Echvi_3241 +0.6 1.0 hypothetical protein compare
Echvi_0727 +0.6 0.8 hypothetical protein compare
Echvi_4218 +0.6 2.5 RND family efflux transporter, MFP subunit compare
Echvi_2954 +0.6 3.5 Nucleoside permease compare
Echvi_3670 +0.6 1.1 hypothetical protein compare
Echvi_4611 +0.6 0.9 hypothetical protein compare
Echvi_3872 +0.6 1.3 SnoaL-like polyketide cyclase. compare
Echvi_1022 +0.5 3.9 ABC-type spermidine/putrescine transport systems, ATPase components compare
Echvi_2984 +0.5 2.2 hypothetical protein compare
Echvi_4587 +0.5 1.3 hypothetical protein compare
Echvi_3917 +0.5 4.2 hypothetical protein compare
Echvi_1822 +0.5 1.1 ubiquinone/menaquinone biosynthesis methyltransferases compare
Echvi_2401 +0.5 0.8 hypothetical protein compare
Echvi_1457 +0.5 2.8 Isopenicillin N synthase and related dioxygenases compare
Echvi_1930 +0.5 1.4 DNA repair proteins compare
Echvi_1493 +0.5 1.0 hypothetical protein compare
Echvi_2284 +0.5 1.6 hypothetical protein compare
Echvi_3439 +0.5 3.7 Membrane proteins related to metalloendopeptidases compare
Echvi_0842 +0.5 4.0 Membrane proteins related to metalloendopeptidases compare
Echvi_0015 +0.5 1.8 succinyl-CoA synthetase, alpha subunit compare
Echvi_3020 +0.5 2.0 hypothetical protein compare
Echvi_2409 +0.5 2.3 Acetyltransferases compare
Echvi_3296 +0.5 2.4 Deoxyhypusine synthase compare
Echvi_2539 +0.5 2.9 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Echvi_4074 +0.5 3.8 Tetratricopeptide repeat. compare
Echvi_4162 +0.5 1.9 Flavodoxins compare
Echvi_0715 +0.5 0.7 hypothetical protein compare
Echvi_0757 +0.5 1.7 hypothetical protein compare
Echvi_1735 +0.5 3.0 Mg chelatase-related protein compare
Echvi_3571 +0.5 3.4 hypothetical protein compare
Echvi_2321 +0.5 2.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Echvi_0039 +0.5 2.6 Predicted membrane protein (DUF2154). compare
Echvi_3365 +0.5 2.1 Transcriptional regulator compare
Echvi_3641 +0.5 1.8 Uncharacterized conserved protein compare
Echvi_2405 +0.5 4.1 Periplasmic protease compare
Echvi_2249 +0.5 0.8 hypothetical protein compare
Echvi_0288 +0.5 2.4 Lauroyl/myristoyl acyltransferase compare
Echvi_0105 +0.5 2.0 hypothetical protein compare
Echvi_4517 +0.5 3.1 Periplasmic component of the Tol biopolymer transport system compare
Echvi_1835 +0.5 2.5 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Echvi_2947 +0.5 2.0 hypothetical protein compare
Echvi_3054 +0.5 2.0 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Echvi_3896 +0.5 1.3 PAP2 superfamily. compare
Echvi_2908 +0.5 2.3 succinyl-CoA synthetase, beta subunit compare
Echvi_3565 +0.5 2.0 Thiamine monophosphate synthase compare
Echvi_3044 +0.5 1.9 hypothetical protein compare
Echvi_2892 +0.5 2.6 Protein of unknown function, DUF481. compare
Echvi_2661 +0.5 2.1 hypothetical protein compare
Echvi_4114 +0.4 2.0 hypothetical protein compare
Echvi_1529 +0.4 2.8 conserved hypothetical protein compare
Echvi_1727 +0.4 3.6 ABC-type multidrug transport system, ATPase and permease components compare
Echvi_0854 +0.4 1.7 hypothetical protein compare
Echvi_1747 +0.4 2.0 amino acid carrier protein compare
Echvi_2538 +0.4 1.0 Uncharacterized protein conserved in bacteria compare
Echvi_0329 +0.4 1.2 hypothetical protein compare
Echvi_4666 +0.4 1.4 Cold shock proteins compare
Echvi_0372 +0.4 2.0 conserved hypothetical protein, YceG family compare
Echvi_1725 +0.4 1.9 hypothetical protein compare
Echvi_1182 +0.4 1.7 hypothetical protein compare
Echvi_1779 +0.4 3.0 Predicted transcriptional regulator compare
Echvi_4160 +0.4 2.7 hypothetical protein compare
Echvi_1538 +0.4 3.4 hypothetical protein compare
Echvi_1826 +0.4 2.3 Fructose-1,6-bisphosphatase compare
Echvi_3278 +0.4 1.3 hypothetical protein compare
Echvi_2989 +0.4 3.2 Protein of unknown function (DUF1573). compare
Echvi_0875 +0.4 1.7 hypothetical protein compare
Echvi_2517 +0.4 1.9 phosphoribosyl-ATP pyrophosphohydrolase compare


Specific Phenotypes

For 20 genes in this experiment

For stress Cisplatin in Echinicola vietnamensis KMM 6221, DSM 17526

For stress Cisplatin across organisms