Experiment set1IT031 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Thallium(I) acetate 0.0025 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_07335 +9.6 30.3 transcriptional regulator conserved
CA264_07330 +9.0 42.1 hypothetical protein compare
CA264_06085 +7.9 54.3 hypothetical protein compare
CA264_07325 +7.4 11.4 YfcE family phosphodiesterase compare
CA264_05385 +7.2 18.2 hypothetical protein compare
CA264_19055 +7.0 40.3 epimerase compare
CA264_14450 +5.9 17.7 endonuclease/exonuclease/phosphatase compare
CA264_13080 +5.5 17.9 aminodeoxychorismate lyase compare
CA264_13340 +5.2 5.5 iron-sulfur cluster assembly accessory protein compare
CA264_05275 +5.2 19.1 MFS transporter compare
CA264_01065 +4.7 5.9 MarR family transcriptional regulator compare
CA264_17675 +4.5 12.1 Fe-S oxidoreductase compare
CA264_06090 +4.4 6.3 hypothetical protein compare
CA264_19450 +4.2 20.7 type I methionyl aminopeptidase compare
CA264_20110 +4.2 18.1 DNA helicase RecQ compare
CA264_14455 +3.8 3.2 ribosome maturation factor compare
CA264_10930 +3.6 4.9 methylglutaconyl-CoA hydratase compare
CA264_20030 +3.5 10.3 GNAT family N-acetyltransferase compare
CA264_20040 +3.5 9.7 hypothetical protein compare
CA264_00015 +3.3 20.1 hypothetical protein compare
CA264_12310 +3.2 6.0 NifU family protein compare
CA264_20440 +3.2 2.3 thiamine biosynthesis protein ThiS compare
CA264_17680 +3.2 16.7 CoB--CoM heterodisulfide reductase compare
CA264_08105 +3.1 21.4 NupC/NupG family nucleoside CNT transporter compare
CA264_08320 +3.1 7.0 hypothetical protein compare
CA264_07020 +3.1 8.0 phosphatidylglycerophosphatase A compare
CA264_19860 +3.0 11.8 NifU family protein compare
CA264_02545 +3.0 4.9 sulfate adenylyltransferase small subunit compare
CA264_18675 +2.8 4.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
CA264_03715 +2.8 7.5 DUF983 domain-containing protein compare
CA264_07185 +2.6 8.7 TetR family transcriptional regulator compare
CA264_16130 +2.5 11.1 TetR family transcriptional regulator compare
CA264_20060 +2.5 5.6 ribosome silencing factor RsfS compare
CA264_02525 +2.5 3.7 siroheme synthase compare
CA264_19885 +2.4 13.8 uridine kinase compare
CA264_12325 +2.4 13.3 polysaccharide biosynthesis protein compare
CA264_20635 +2.4 2.9 thioredoxin family protein compare
CA264_10870 +2.3 4.6 division/cell wall cluster transcriptional repressor MraZ compare
CA264_19830 +2.3 16.4 hypothetical protein compare
CA264_16625 +2.3 15.4 SAM-dependent methyltransferase compare
CA264_14200 +2.3 3.3 NADH-quinone oxidoreductase subunit A compare
CA264_16140 +2.3 13.1 efflux transporter periplasmic adaptor subunit compare
CA264_06990 +2.3 12.2 PA-phosphatase compare
CA264_02540 +2.2 3.8 sulfate adenylyltransferase compare
CA264_12345 +2.2 7.5 lipid carrier--UDP-N-acetylgalactosaminyltransferase compare
CA264_00335 +2.2 8.4 dicarboxylate/amino acid:cation symporter compare
CA264_19845 +2.1 13.7 hypothetical protein compare
CA264_15045 +2.1 7.0 acetyl-CoA acetyltransferase compare
CA264_01060 +2.0 5.3 hypothetical protein compare
CA264_08090 +2.0 12.9 short-chain dehydrogenase compare
CA264_03810 +2.0 4.6 hypothetical protein compare
CA264_15050 +1.9 15.3 3-hydroxyacyl-CoA dehydrogenase compare
CA264_11795 +1.9 12.0 aerotolerance regulator BatB compare
CA264_08780 +1.9 12.8 hypothetical protein compare
CA264_01995 +1.9 15.6 SH3 domain-containing protein compare
CA264_00235 +1.9 6.0 hypothetical protein compare
CA264_19090 +1.8 2.5 hypothetical protein compare
CA264_21070 +1.8 6.0 transcriptional repressor compare
CA264_02055 +1.8 2.2 hypothetical protein compare
CA264_13645 +1.8 7.0 hypothetical protein compare
CA264_13560 +1.8 2.4 membrane protein insertion efficiency factor YidD compare
CA264_16630 +1.8 11.5 DUF58 domain-containing protein compare
CA264_10365 +1.7 1.7 hypothetical protein compare
CA264_07165 +1.7 2.7 hypothetical protein compare
CA264_00330 +1.7 10.9 hypothetical protein compare
CA264_04820 +1.7 8.8 deoxyhypusine synthase compare
CA264_07025 +1.7 6.8 inositol-3-phosphate synthase compare
CA264_20660 +1.7 7.4 methylmalonyl Co-A mutase-associated GTPase MeaB compare
CA264_19730 +1.6 12.6 peptidylprolyl isomerase compare
CA264_11800 +1.6 10.9 aerotolerance protein compare
CA264_19925 +1.6 3.6 peptidyl-prolyl cis-trans isomerase compare
CA264_16115 +1.5 5.0 hypothetical protein compare
CA264_16635 +1.5 11.6 AAA family ATPase compare
CA264_16330 +1.5 7.7 hypothetical protein compare
CA264_12490 +1.5 6.4 phosphohydrolase compare
CA264_06395 +1.5 9.2 DUF58 domain-containing protein compare
CA264_14480 +1.5 6.7 large-conductance mechanosensitive channel compare
CA264_11280 +1.5 3.7 SCO family protein compare
CA264_17790 +1.5 6.7 hypothetical protein compare
CA264_16145 +1.5 8.0 copper transporter compare
CA264_16135 +1.5 6.7 transporter compare
CA264_01715 +1.5 4.4 4Fe-4S ferredoxin compare
CA264_06475 +1.5 1.5 hypothetical protein compare
CA264_01730 +1.5 10.3 NADH-quinone oxidoreductase subunit L compare
CA264_01665 +1.5 5.8 phenylalanine 4-monooxygenase compare
CA264_07005 +1.5 8.7 CDP-diacylglycerol--inositol 3-phosphatidyltransferase compare
CA264_20055 +1.5 2.4 peptidase M41 compare
CA264_17510 +1.5 4.5 pseudouridylate synthase compare
CA264_13075 +1.4 6.6 thioesterase compare
CA264_09285 +1.4 3.9 anti-anti-sigma factor compare
CA264_01735 +1.4 8.4 oxidoreductase compare
CA264_20385 +1.4 5.0 methyltransferase compare
CA264_01985 +1.4 1.7 tRNA-Lys compare
CA264_19005 +1.4 10.7 SusC/RagA family TonB-linked outer membrane protein compare
CA264_08265 +1.4 2.8 iron-sulfur cluster assembly accessory protein compare
CA264_07245 +1.4 5.7 hypothetical protein compare
CA264_11065 +1.4 2.0 hypothetical protein compare
CA264_16640 +1.4 8.5 twin-arginine translocation pathway signal compare
CA264_06410 +1.4 5.1 YggS family pyridoxal phosphate enzyme compare
CA264_21275 +1.4 3.5 hypothetical protein compare
CA264_07260 +1.3 7.3 hypothetical protein compare
CA264_16055 +1.3 6.6 hypothetical protein compare
CA264_01260 +1.3 6.4 hypothetical protein compare
CA264_16935 +1.3 1.7 hypothetical protein compare
CA264_03025 +1.3 10.3 T9SS C-terminal target domain-containing protein compare
CA264_21305 +1.3 2.9 hypothetical protein compare
CA264_16590 +1.3 3.6 site-2 protease family protein compare
CA264_20095 +1.3 3.6 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
CA264_11915 +1.3 3.1 peptidoglycan synthetase compare
CA264_15215 +1.3 5.2 hypothetical protein compare
CA264_16340 +1.3 9.1 hypothetical protein compare
CA264_21060 +1.2 9.5 hypothetical protein compare
CA264_19840 +1.2 4.1 hypothetical protein compare
CA264_06460 +1.2 6.7 NUDIX domain-containing protein compare
CA264_13915 +1.2 2.5 PAS domain-containing sensor histidine kinase compare
CA264_13550 +1.2 9.1 hypothetical protein compare
CA264_01705 +1.2 6.6 NADH-quinone oxidoreductase subunit H compare
CA264_20615 +1.2 7.4 N-acetylmuramoyl-L-alanine amidase compare
CA264_17080 +1.2 3.2 rRNA (cytidine-2'-O-)-methyltransferase compare
CA264_13100 +1.2 1.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
CA264_08940 +1.2 3.8 cysteine synthase B compare
CA264_16120 +1.2 4.3 sensor histidine kinase compare
CA264_17305 +1.2 3.2 hypothetical protein compare
CA264_21065 +1.2 2.1 transcriptional regulator compare
CA264_20620 +1.2 5.0 mammalian cell entry protein compare
CA264_02565 +1.2 2.0 hypothetical protein compare
CA264_07800 +1.2 4.3 hypothetical protein compare
CA264_19615 +1.2 5.3 hypothetical protein compare
CA264_18860 +1.2 5.7 TIGR00374 family protein compare
CA264_18355 +1.2 3.5 thioredoxin family protein compare
CA264_19760 +1.1 3.9 hypothetical protein compare
CA264_20625 +1.1 4.9 methylcrotonoyl-CoA carboxylase compare
CA264_13905 +1.1 5.5 hybrid sensor histidine kinase/response regulator compare
CA264_05005 +1.1 8.6 colicin receptor compare
CA264_15520 +1.1 4.8 hypothetical protein compare
CA264_05240 +1.1 4.0 glycerol acyltransferase compare
CA264_01090 +1.1 4.1 hypothetical protein compare
CA264_18225 +1.1 6.5 hypothetical protein compare
CA264_21465 +1.1 2.5 hypothetical protein compare
CA264_20310 +1.1 3.9 TVP38/TMEM64 family protein compare
CA264_05765 +1.1 4.7 cytochrome c oxidase accessory protein CcoG compare
CA264_15805 +1.1 4.0 hypothetical protein compare
CA264_13245 +1.1 7.0 DUF4835 domain-containing protein compare
CA264_17160 +1.1 4.8 ketosteroid isomerase compare
CA264_06605 +1.1 4.3 ketoacyl-ACP synthase III compare
CA264_13800 +1.1 1.3 hypothetical protein compare
CA264_07045 +1.1 2.9 TetR family transcriptional regulator compare
CA264_01410 +1.1 1.9 ATP-dependent Clp protease proteolytic subunit compare
CA264_21445 +1.1 2.9 metal transporter compare
CA264_13165 +1.1 3.7 arylesterase compare
CA264_15800 +1.1 5.1 hypothetical protein compare
CA264_00780 +1.1 3.6 glyoxalase compare
CA264_17065 +1.1 4.7 hypothetical protein compare
CA264_17365 +1.1 4.7 rhomboid family intramembrane serine protease compare
CA264_00240 +1.0 3.0 hypothetical protein compare
CA264_05930 +1.0 2.3 glyoxalase compare
CA264_07000 +1.0 7.7 DUF4833 domain-containing protein compare
CA264_03020 +1.0 6.1 hypothetical protein compare
CA264_19245 +1.0 5.0 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
CA264_08665 +1.0 3.4 N-acetylmuramoyl-L-alanine amidase compare
CA264_13310 +1.0 7.6 glycosyl hydrolase compare
CA264_15745 +1.0 0.7 tRNA-Arg compare
CA264_13030 +1.0 2.4 cysteine methyltransferase compare
CA264_12940 +1.0 3.9 alcohol dehydrogenase compare
CA264_18775 +1.0 0.7 hypothetical protein compare
CA264_18585 +1.0 3.1 hypothetical protein compare
CA264_03735 +1.0 6.6 hypothetical protein compare
CA264_18655 +1.0 2.2 transcriptional repressor compare
CA264_05375 +1.0 7.9 hypothetical protein compare
CA264_13545 +1.0 4.2 ATP-binding protein compare
CA264_20520 +1.0 4.0 hypothetical protein compare
CA264_16570 +1.0 3.1 hypothetical protein compare
CA264_02920 +1.0 3.3 response regulator compare
CA264_17685 +1.0 4.1 hypothetical protein compare
CA264_16815 +1.0 3.5 hypothetical protein compare
CA264_18885 +1.0 6.2 hypothetical protein compare
CA264_21440 +1.0 2.6 metal transporter compare
CA264_09270 +1.0 1.8 tRNA-specific adenosine deaminase compare
CA264_05760 +1.0 6.5 nitrogen fixation protein FixH compare
CA264_14470 +1.0 3.1 hypothetical protein compare
CA264_06610 +1.0 2.5 iron-dependent repressor compare
CA264_14550 +1.0 8.5 cell surface protein SprA compare
CA264_17995 +1.0 6.0 2-hydroxymuconic semialdehyde dehydrogenase compare
CA264_16490 +1.0 4.7 glucose-1-phosphate thymidylyltransferase compare
CA264_19045 +1.0 2.4 acyl-CoA dehydrogenase compare
CA264_01370 +1.0 8.1 hypothetical protein compare
CA264_01720 +0.9 4.6 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 compare
CA264_18875 +0.9 3.6 N-acetyltransferase compare
CA264_08670 +0.9 3.5 hypothetical protein compare
CA264_01025 +0.9 1.1 hypothetical protein compare
CA264_11830 +0.9 2.3 acetyl-CoA acetyltransferase compare
CA264_16410 +0.9 5.7 hypothetical protein compare
CA264_16645 +0.9 4.5 peptidase C69 compare
CA264_08785 +0.9 5.4 hypothetical protein compare
CA264_10750 +0.9 4.5 SAM-dependent methyltransferase compare
CA264_18530 +0.9 1.9 MarR family transcriptional regulator compare
CA264_05755 +0.9 5.1 hypothetical protein compare
CA264_02600 +0.9 3.5 DsbA family protein compare
CA264_16010 +0.9 6.5 hypothetical protein compare
CA264_18930 +0.9 4.0 RNA helicase compare


Specific Phenotypes

For 66 genes in this experiment

For stress Thallium(I) acetate in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Thallium(I) acetate across organisms