Experiment set1IT030 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Thallium(I) acetate 0.001 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_07335 +5.2 30.5 transcriptional regulator conserved
CA264_06085 +5.2 32.5 hypothetical protein compare
CA264_07330 +5.0 39.8 hypothetical protein compare
CA264_07325 +4.7 21.5 YfcE family phosphodiesterase compare
CA264_19055 +4.2 29.8 epimerase compare
CA264_06090 +4.2 13.9 hypothetical protein compare
CA264_16340 +4.1 26.2 hypothetical protein compare
CA264_20055 +4.1 15.1 peptidase M41 compare
CA264_06600 +4.0 23.6 glycosyltransferase compare
CA264_12325 +3.9 27.4 polysaccharide biosynthesis protein compare
CA264_05385 +3.8 19.5 hypothetical protein compare
CA264_14450 +3.7 21.2 endonuclease/exonuclease/phosphatase compare
CA264_20440 +3.7 7.3 thiamine biosynthesis protein ThiS compare
CA264_12345 +3.7 16.8 lipid carrier--UDP-N-acetylgalactosaminyltransferase compare
CA264_14550 +3.7 34.8 cell surface protein SprA compare
CA264_13100 +3.6 10.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
CA264_15215 +3.6 17.6 hypothetical protein compare
CA264_01065 +3.6 5.8 MarR family transcriptional regulator compare
CA264_08105 +3.6 23.8 NupC/NupG family nucleoside CNT transporter compare
CA264_11065 +3.6 13.5 hypothetical protein compare
CA264_16410 +3.6 31.6 hypothetical protein compare
CA264_14635 +3.5 29.9 hypothetical protein compare
CA264_15230 +3.4 23.8 hypothetical protein compare
CA264_19920 +3.4 18.4 alanine glycine permease compare
CA264_15165 +3.3 12.2 flagellar motor protein MotA compare
CA264_19885 +3.3 22.6 uridine kinase compare
CA264_19925 +3.3 21.2 peptidyl-prolyl cis-trans isomerase compare
CA264_19090 +3.3 14.2 hypothetical protein compare
CA264_00455 +3.3 22.8 PorT-like protein compare
CA264_17680 +3.2 17.4 CoB--CoM heterodisulfide reductase compare
CA264_02545 +3.2 9.8 sulfate adenylyltransferase small subunit compare
CA264_07020 +3.1 18.9 phosphatidylglycerophosphatase A compare
CA264_05275 +3.1 10.7 MFS transporter compare
CA264_20110 +3.1 15.0 DNA helicase RecQ compare
CA264_12310 +3.1 7.6 NifU family protein compare
CA264_03715 +3.1 12.1 DUF983 domain-containing protein compare
CA264_17675 +3.1 18.6 Fe-S oxidoreductase compare
CA264_18675 +3.1 4.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
CA264_17650 +3.0 13.1 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase compare
CA264_14455 +3.0 8.4 ribosome maturation factor compare
CA264_13340 +3.0 11.6 iron-sulfur cluster assembly accessory protein compare
CA264_00660 +3.0 23.4 hypothetical protein compare
CA264_18665 +3.0 16.7 prenyltransferase compare
CA264_15170 +2.9 20.9 biopolymer transporter ExbD compare
CA264_13080 +2.9 8.5 aminodeoxychorismate lyase compare
CA264_11010 +2.9 27.0 hypothetical protein compare
CA264_03910 +2.9 20.8 family 2 glycosyl transferase compare
CA264_15520 +2.8 9.7 hypothetical protein compare
CA264_15175 +2.8 7.6 biopolymer transporter ExbD compare
CA264_19615 +2.8 16.2 hypothetical protein compare
CA264_12440 +2.8 5.7 methionyl-tRNA formyltransferase compare
CA264_16680 +2.8 23.3 hypothetical protein compare
CA264_01370 +2.8 26.6 hypothetical protein compare
CA264_19760 +2.8 13.1 hypothetical protein compare
CA264_14765 +2.8 22.3 hypothetical protein compare
CA264_00015 +2.7 18.1 hypothetical protein compare
CA264_17080 +2.7 13.6 rRNA (cytidine-2'-O-)-methyltransferase compare
CA264_03905 +2.7 18.0 polysaccharide deacetylase family protein compare
CA264_16760 +2.7 22.8 hypothetical protein compare
CA264_16625 +2.7 18.8 SAM-dependent methyltransferase compare
CA264_03100 +2.7 20.9 Xaa-Pro aminopeptidase compare
CA264_17050 +2.7 25.2 hypothetical protein compare
CA264_06990 +2.6 17.8 PA-phosphatase compare
CA264_04820 +2.6 20.1 deoxyhypusine synthase compare
CA264_18135 +2.6 13.2 ABC transporter ATP-binding protein compare
CA264_05005 +2.6 22.8 colicin receptor compare
CA264_05755 +2.6 10.6 hypothetical protein compare
CA264_06345 +2.6 23.2 hypothetical protein compare
CA264_14480 +2.6 13.1 large-conductance mechanosensitive channel compare
CA264_19450 +2.6 16.4 type I methionyl aminopeptidase compare
CA264_18080 +2.5 11.3 hypothetical protein compare
CA264_14365 +2.5 13.6 radical SAM protein compare
CA264_18695 +2.5 12.1 glycogen synthase compare
CA264_08320 +2.5 7.2 hypothetical protein compare
CA264_05240 +2.5 18.5 glycerol acyltransferase compare
CA264_19860 +2.5 9.4 NifU family protein compare
CA264_02525 +2.4 10.7 siroheme synthase compare
CA264_17790 +2.4 8.1 hypothetical protein compare
CA264_20650 +2.4 11.0 diviva domain containing protein compare
CA264_06475 +2.4 4.1 hypothetical protein compare
CA264_19770 +2.4 13.7 ATPase compare
CA264_14200 +2.4 5.2 NADH-quinone oxidoreductase subunit A compare
CA264_10930 +2.4 9.2 methylglutaconyl-CoA hydratase compare
CA264_09185 +2.4 8.6 hypothetical protein compare
CA264_11830 +2.4 13.5 acetyl-CoA acetyltransferase compare
CA264_18480 +2.4 4.1 hypothetical protein compare
CA264_16935 +2.3 5.2 hypothetical protein compare
CA264_08940 +2.3 10.3 cysteine synthase B compare
CA264_01430 +2.3 12.1 transcriptional repressor compare
CA264_15235 +2.3 16.8 hypothetical protein compare
CA264_04525 +2.3 15.9 DUF2279 domain-containing protein compare
CA264_06610 +2.3 6.0 iron-dependent repressor compare
CA264_17510 +2.3 15.8 pseudouridylate synthase compare
CA264_15255 +2.3 14.3 alpha/beta hydrolase compare
CA264_20615 +2.3 17.0 N-acetylmuramoyl-L-alanine amidase compare
CA264_12075 +2.3 16.0 PAS domain S-box protein compare
CA264_19830 +2.3 14.7 hypothetical protein compare
CA264_08110 +2.3 16.5 hypothetical protein compare
CA264_16630 +2.3 17.4 DUF58 domain-containing protein compare
CA264_01390 +2.2 14.9 iron ABC transporter permease compare
CA264_12940 +2.2 10.7 alcohol dehydrogenase compare
CA264_13905 +2.2 7.5 hybrid sensor histidine kinase/response regulator compare
CA264_11015 +2.2 13.8 hypothetical protein compare
CA264_10750 +2.2 7.0 SAM-dependent methyltransferase compare
CA264_07045 +2.2 9.1 TetR family transcriptional regulator compare
CA264_01505 +2.2 11.1 hypothetical protein compare
CA264_10870 +2.2 4.8 division/cell wall cluster transcriptional repressor MraZ compare
CA264_18345 +2.2 4.4 hypothetical protein compare
CA264_09230 +2.2 8.5 hydroxymethylglutaryl-CoA lyase compare
CA264_06555 +2.2 7.7 hypothetical protein compare
CA264_16120 +2.1 10.3 sensor histidine kinase compare
CA264_00335 +2.1 13.6 dicarboxylate/amino acid:cation symporter compare
CA264_01385 +2.1 16.7 iron ABC transporter substrate-binding protein compare
CA264_19845 +2.1 10.0 hypothetical protein compare
CA264_08115 +2.1 11.8 electron transfer flavoprotein subunit alpha compare
CA264_03025 +2.1 10.0 T9SS C-terminal target domain-containing protein compare
CA264_00725 +2.1 8.6 pyruvate kinase compare
CA264_17560 +2.1 14.5 hypothetical protein compare
CA264_09340 +2.1 14.2 hypothetical protein compare
CA264_20030 +2.0 9.8 GNAT family N-acetyltransferase compare
CA264_18670 +2.0 6.7 cold-shock protein compare
CA264_08120 +2.0 13.3 electron transfer flavoprotein subunit alpha compare
CA264_11130 +2.0 13.3 mechanosensitive ion channel protein MscS compare
CA264_20040 +2.0 9.2 hypothetical protein compare
CA264_05760 +2.0 8.9 nitrogen fixation protein FixH compare
CA264_13310 +2.0 17.6 glycosyl hydrolase compare
CA264_18655 +2.0 6.2 transcriptional repressor compare
CA264_17760 +2.0 13.9 leucine dehydrogenase compare
CA264_00170 +2.0 8.2 ATP:cob(I)alamin adenosyltransferase compare
CA264_08125 +2.0 10.6 tetratricopeptide repeat protein compare
CA264_20570 +2.0 5.9 inorganic pyrophosphatase compare
CA264_21305 +2.0 6.4 hypothetical protein compare
CA264_07800 +2.0 9.2 hypothetical protein compare
CA264_00325 +2.0 7.4 hypothetical protein compare
CA264_01060 +1.9 5.7 hypothetical protein compare
CA264_02540 +1.9 9.4 sulfate adenylyltransferase compare
CA264_17110 +1.9 14.6 radical SAM protein compare
CA264_20690 +1.9 16.0 methylmalonyl-CoA mutase compare
CA264_19005 +1.9 16.2 SusC/RagA family TonB-linked outer membrane protein compare
CA264_14290 +1.9 12.8 glycosyl transferase family 2 compare
CA264_08780 +1.9 9.1 hypothetical protein compare
CA264_05765 +1.9 7.5 cytochrome c oxidase accessory protein CcoG compare
CA264_00330 +1.9 9.5 hypothetical protein compare
CA264_05250 +1.9 16.4 hypothetical protein compare
CA264_18120 +1.9 14.3 ABC transporter compare
CA264_03870 +1.9 7.3 transcription elongation factor GreA compare
CA264_12335 +1.9 11.3 pyridoxal phosphate-dependent aminotransferase compare
CA264_20695 +1.8 13.3 methylmalonyl-CoA mutase compare
CA264_11795 +1.8 14.3 aerotolerance regulator BatB compare
CA264_19685 +1.8 3.7 DNA-binding response regulator compare
CA264_19680 +1.8 5.8 two-component sensor histidine kinase compare
CA264_19150 +1.8 14.9 TonB dependent receptor compare
CA264_18860 +1.8 11.5 TIGR00374 family protein compare
CA264_14965 +1.8 14.0 glycosyltransferase WbuB compare
CA264_16115 +1.8 5.7 hypothetical protein compare
CA264_14515 +1.8 6.8 peptidase M23 compare
CA264_13075 +1.8 5.0 thioesterase compare
CA264_04655 +1.8 10.3 cell division protein compare
CA264_19245 +1.8 11.1 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
CA264_07185 +1.8 8.5 TetR family transcriptional regulator compare
CA264_14985 +1.8 6.3 hypothetical protein compare
CA264_10920 +1.8 12.3 helix-turn-helix-type transcriptional regulator compare
CA264_17860 +1.8 9.7 tRNA dihydrouridine synthase DusB compare
CA264_01405 +1.8 10.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
CA264_02430 +1.8 8.1 glucoamylase compare
CA264_07050 +1.7 6.3 serine acetyltransferase compare
CA264_16140 +1.7 10.8 efflux transporter periplasmic adaptor subunit compare
CA264_15045 +1.7 9.1 acetyl-CoA acetyltransferase compare
CA264_06605 +1.7 9.3 ketoacyl-ACP synthase III compare
CA264_14475 +1.7 6.2 hypothetical protein compare
CA264_20060 +1.7 4.6 ribosome silencing factor RsfS compare
CA264_06590 +1.7 10.1 3-hydroxybutyryl-CoA dehydrogenase compare
CA264_03810 +1.7 5.0 hypothetical protein compare
CA264_17845 +1.7 11.1 GNAT family N-acetyltransferase compare
CA264_20555 +1.7 6.7 6-pyruvoyl tetrahydrobiopterin synthase compare
CA264_21545 +1.7 4.2 AraC family transcriptional regulator compare
CA264_07025 +1.7 8.8 inositol-3-phosphate synthase compare
CA264_17785 +1.6 6.8 preprotein translocase subunit YajC compare
CA264_07005 +1.6 10.5 CDP-diacylglycerol--inositol 3-phosphatidyltransferase compare
CA264_01410 +1.6 5.2 ATP-dependent Clp protease proteolytic subunit compare
CA264_19730 +1.6 13.8 peptidylprolyl isomerase compare
CA264_21310 +1.6 3.5 hypothetical protein compare
CA264_20660 +1.6 8.8 methylmalonyl Co-A mutase-associated GTPase MeaB compare
CA264_15050 +1.6 14.4 3-hydroxyacyl-CoA dehydrogenase compare
CA264_04835 +1.6 10.4 ABC transporter ATP-binding protein compare
CA264_01565 +1.6 7.5 tellurium resistance protein TerC compare
CA264_01785 +1.6 7.4 hypothetical protein compare
CA264_11280 +1.6 4.4 SCO family protein compare
CA264_20715 +1.6 6.1 metallophosphatase compare
CA264_11800 +1.6 12.1 aerotolerance protein compare
CA264_16145 +1.6 10.3 copper transporter compare
CA264_14180 +1.6 10.8 transcriptional regulator compare
CA264_02520 +1.5 10.1 uroporphyrinogen-III C-methyltransferase compare
CA264_17590 +1.5 6.4 RidA family protein compare
CA264_21285 +1.5 4.0 hypothetical protein compare
CA264_03020 +1.5 7.9 hypothetical protein compare
CA264_19045 +1.5 6.6 acyl-CoA dehydrogenase compare
CA264_20700 +1.5 9.8 hypothetical protein compare
CA264_02415 +1.5 6.5 dethiobiotin synthase compare
CA264_20430 +1.5 9.3 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare


Specific Phenotypes

For 52 genes in this experiment

For stress Thallium(I) acetate in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Thallium(I) acetate across organisms