Experiment set1IT030 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

marine broth with Thallium(I) acetate 0.025 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Echvi_2958 +1.5 10.5 amino acid/peptide transporter (Peptide:H+ symporter), bacterial compare
Echvi_3512 +1.4 4.7 DNA binding domain, excisionase family compare
Echvi_4553 +1.3 3.1 hypothetical protein compare
Echvi_3918 +1.3 2.5 Histone H1-like protein Hc1. compare
Echvi_1492 +1.3 2.7 hypothetical protein compare
Echvi_1000 +1.2 5.5 Predicted transcriptional regulators conserved
Echvi_4594 +1.1 7.5 Xaa-Pro aminopeptidase compare
Echvi_0128 +1.1 2.5 hypothetical protein compare
Echvi_0622 +1.1 7.3 gliding motility-associated protein GldL compare
Echvi_4383 +1.1 2.5 hypothetical protein compare
Echvi_0857 +1.0 8.0 hypothetical protein compare
Echvi_2317 +1.0 2.3 pyruvate kinase compare
Echvi_1813 +1.0 1.8 Ribonuclease HI compare
Echvi_1200 +1.0 4.2 Predicted membrane protein compare
Echvi_1001 +1.0 5.5 hypothetical protein compare
Echvi_0299 +1.0 8.3 gliding motility-associated ABC transporter permease protein GldF compare
Echvi_1140 +1.0 6.8 Response regulator of the LytR/AlgR family compare
Echvi_3292 +0.9 1.1 hypothetical protein compare
Echvi_1139 +0.9 7.3 Putative regulator of cell autolysis compare
Echvi_4589 +0.9 3.0 MoxR-like ATPases compare
Echvi_0096 +0.9 1.7 Predicted pyrophosphatase compare
Echvi_1516 +0.9 2.9 hypothetical protein compare
Echvi_0620 +0.9 7.6 gliding motility associated protien GldN compare
Echvi_0623 +0.9 8.1 gliding motility-associated lipoprotein GldK compare
Echvi_0717 +0.9 4.2 DnaK suppressor protein compare
Echvi_0621 +0.9 8.1 gliding motility-associated protein GldM compare
Echvi_0674 +0.9 7.7 hypothetical protein compare
Echvi_1319 +0.8 7.7 gliding motility-associated lipoprotein GldB compare
Echvi_0298 +0.8 7.5 gliding-associated putative ABC transporter substrate-binding component GldG compare
Echvi_1821 +0.8 6.9 hypothetical protein compare
Echvi_2393 +0.8 2.5 uracil-DNA glycosylase compare
Echvi_3505 +0.8 1.9 hypothetical protein compare
Echvi_4068 +0.8 2.2 isocitrate dehydrogenase compare
Echvi_1224 +0.8 6.9 gliding motility-associated lipoprotein GldD compare
Echvi_0164 +0.8 7.0 Mannose-1-phosphate guanylyltransferase compare
Echvi_2254 +0.8 3.9 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) compare
Echvi_1850 +0.8 5.8 Bacterial SH3 domain. compare
Echvi_3193 +0.8 1.6 hypothetical protein compare
Echvi_1557 +0.8 4.2 MoxR-like ATPases compare
Echvi_0655 +0.8 6.1 hypothetical protein compare
Echvi_4075 +0.8 4.8 hypothetical protein compare
Echvi_0300 +0.8 5.0 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
Echvi_2193 +0.7 5.2 Transcriptional regulators compare
Echvi_4069 +0.7 2.1 Enoyl-CoA hydratase/carnithine racemase compare
Echvi_0652 +0.7 5.0 Outer membrane protein compare
Echvi_1020 +0.7 1.3 hypothetical protein compare
Echvi_0211 +0.7 2.1 hypothetical protein compare
Echvi_0626 +0.7 4.7 hypothetical protein compare
Echvi_0024 +0.7 2.5 Protein of unknown function (DUF1684). compare
Echvi_0617 +0.7 6.5 hypothetical protein compare
Echvi_3764 +0.7 2.1 Predicted transcriptional regulators compare
Echvi_4631 +0.7 4.9 (p)ppGpp synthetase, RelA/SpoT family compare
Echvi_3703 +0.7 3.4 hypothetical protein compare
Echvi_4621 +0.7 4.2 hypothetical protein compare
Echvi_2253 +0.7 4.6 hypothetical protein compare
Echvi_2824 +0.7 5.3 hypothetical protein compare
Echvi_1489 +0.7 4.9 UDP-N-acetylglucosamine 2-epimerase compare
Echvi_1611 +0.7 2.5 hypothetical protein compare
Echvi_1256 +0.7 4.8 Predicted transcriptional regulators compare
Echvi_4083 +0.7 6.3 hypothetical protein compare
Echvi_0169 +0.6 5.6 hypothetical protein compare
Echvi_0543 +0.6 3.9 hypothetical protein compare
Echvi_3704 +0.6 2.7 hypothetical protein compare
Echvi_4666 +0.6 2.0 Cold shock proteins compare
Echvi_0180 +0.6 1.3 transcription elongation factor GreA compare
Echvi_0624 +0.6 4.9 Bacteroidetes-specific putative membrane protein compare
Echvi_2961 +0.6 1.9 hypothetical protein compare
Echvi_1332 +0.6 2.1 single-stranded-DNA-specific exonuclease RecJ compare
Echvi_1119 +0.6 1.7 hypothetical protein compare
Echvi_0359 +0.6 2.1 hypothetical protein compare
Echvi_1311 +0.6 5.2 gliding motility-associated lipoprotein GldJ compare
Echvi_1517 +0.6 4.9 hypothetical protein compare
Echvi_0852 +0.6 5.3 Parvulin-like peptidyl-prolyl isomerase compare
Echvi_2108 +0.6 1.3 Predicted small integral membrane protein compare
Echvi_1648 +0.6 1.4 hypothetical protein compare
Echvi_1525 +0.6 3.8 hypothetical protein compare
Echvi_4342 +0.6 5.1 transporter, SSS family compare
Echvi_3960 +0.6 0.8 Histone H1-like protein Hc1. compare
Echvi_1833 +0.6 3.8 3-deoxy-D-manno-octulosonic-acid transferase compare
Echvi_2054 +0.6 1.7 hypothetical protein compare
Echvi_3402 +0.6 2.4 hypothetical protein compare
Echvi_4276 +0.6 2.6 hypothetical protein compare
Echvi_2238 +0.6 1.4 hypothetical protein compare
Echvi_0875 +0.6 2.0 hypothetical protein compare
Echvi_2937 +0.5 1.2 Uncharacterized conserved protein compare
Echvi_2832 +0.5 2.5 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase compare
Echvi_4576 +0.5 2.5 FOG: CheY-like receiver compare
Echvi_4209 +0.5 2.8 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_2365 +0.5 1.6 Response regulator containing a CheY-like receiver domain and an HD-GYP domain compare
Echvi_1993 +0.5 3.6 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Echvi_1689 +0.5 0.8 hypothetical protein compare
Echvi_1060 +0.5 3.9 Methyltransferase domain. compare
Echvi_4369 +0.5 0.7 hypothetical protein compare
Echvi_1607 +0.5 0.8 Acylphosphatases compare
Echvi_4573 +0.5 4.2 Glycosyltransferases, probably involved in cell wall biogenesis compare
Echvi_3824 +0.5 1.2 hypothetical protein compare
Echvi_3922 +0.5 1.7 hypothetical protein compare
Echvi_2194 +0.5 2.2 ADP-ribose pyrophosphatase compare
Echvi_3910 +0.5 3.8 Transcriptional regulator/sugar kinase compare
Echvi_2773 +0.5 1.4 hypothetical protein compare
Echvi_2761 +0.5 1.1 hypothetical protein compare
Echvi_3381 +0.5 4.7 Pregnancy-associated plasma protein-A. compare
Echvi_4638 +0.5 4.2 SusD family. compare
Echvi_3820 +0.5 2.8 phosphoesterase, MJ0936 family compare
Echvi_1453 +0.5 1.3 Nitrogen regulatory protein PII compare
Echvi_3291 +0.5 2.8 Predicted membrane protein compare
Echvi_0860 +0.5 2.9 hypothetical protein compare
Echvi_0333 +0.5 4.3 Bacteroidetes-specific putative membrane protein compare
Echvi_1841 +0.5 2.2 predicted cytochrome c component of periplasmic glycoside 3-dehydrogenase (EC 1.1.99.13) (from data) compare
Echvi_1175 +0.5 3.9 Chloride channel protein EriC compare
Echvi_2959 +0.5 1.2 hypothetical protein compare
Echvi_4495 +0.5 2.7 Rrf2 family protein compare
Echvi_0720 +0.5 1.1 hypothetical protein compare
Echvi_0869 +0.5 2.6 hypothetical protein compare
Echvi_3005 +0.5 3.0 hypothetical protein compare
Echvi_1579 +0.5 2.2 hypothetical protein compare
Echvi_3498 +0.5 1.0 hypothetical protein compare
Echvi_3721 +0.5 1.9 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Echvi_3594 +0.5 1.3 hypothetical protein compare
Echvi_1615 +0.5 2.3 Esterase/lipase compare
Echvi_0165 +0.5 2.4 KpsF/GutQ family protein compare
Echvi_3715 +0.5 1.0 Predicted Na+-dependent transporter compare
Echvi_1108 +0.5 3.7 hypothetical protein compare
Echvi_0551 +0.4 2.4 hypothetical protein compare
Echvi_3914 +0.4 3.9 Transcriptional regulators compare
Echvi_2829 +0.4 4.3 hypothetical protein compare
Echvi_4084 +0.4 0.7 glycine cleavage system H protein compare
Echvi_4639 +0.4 4.0 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_2779 +0.4 0.7 hypothetical protein compare
Echvi_4009 +0.4 2.4 TQO small subunit DoxD./TQO small subunit DoxA. compare
Echvi_4248 +0.4 1.6 hypothetical protein compare
Echvi_2258 +0.4 1.2 hypothetical protein compare
Echvi_0460 +0.4 1.6 hypothetical protein compare
Echvi_1537 +0.4 1.7 hypothetical protein compare
Echvi_2830 +0.4 1.7 TIGR00255 family protein compare
Echvi_0589 +0.4 2.0 hypothetical protein compare
Echvi_4242 +0.4 1.3 DNA repair proteins compare
Echvi_3052 +0.4 2.2 3-deoxy-D-manno-octulosonate cytidylyltransferase compare
Echvi_4022 +0.4 1.2 hypothetical protein compare
Echvi_3716 +0.4 0.7 rRNA methylases compare
Echvi_0691 +0.4 3.8 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases compare
Echvi_3178 +0.4 1.8 hypothetical protein compare
Echvi_2606 +0.4 0.7 hypothetical protein compare
Echvi_2131 +0.4 2.4 3-deoxy-8-phosphooctulonate synthase compare
Echvi_1159 +0.4 2.5 Response regulator of the LytR/AlgR family compare
Echvi_0108 +0.4 1.2 DivIVA domain compare
Echvi_1264 +0.4 1.1 hypothetical protein compare
Echvi_4566 +0.4 2.3 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 compare
Echvi_2560 +0.4 2.3 PAS domain S-box compare
Echvi_1712 +0.4 1.6 RND family efflux transporter, MFP subunit compare
Echvi_3289 +0.4 1.5 Predicted transcriptional regulator compare
Echvi_1493 +0.4 1.0 hypothetical protein compare
Echvi_4285 +0.4 1.1 hypothetical protein compare
Echvi_3444 +0.4 0.5 tRNA compare
Echvi_3708 +0.4 1.4 anti-anti-sigma factor compare
Echvi_4622 +0.4 2.1 hypothetical protein compare
Echvi_0134 +0.4 1.9 hypothetical protein compare
Echvi_3376 +0.4 2.1 O-6-methylguanine DNA methyltransferase compare
Echvi_1588 +0.4 2.0 deoxyribose-phosphate aldolase compare
Echvi_2314 +0.4 1.8 beta-ketoacyl-acyl-carrier-protein synthase II compare
Echvi_1434 +0.4 2.3 L-aminopeptidase/D-esterase compare
Echvi_1236 +0.4 1.4 hypothetical protein compare
Echvi_3240 +0.4 1.8 hypothetical protein compare
Echvi_3172 +0.4 1.0 hypothetical protein compare
Echvi_3956 +0.4 1.7 Transcriptional regulator compare
Echvi_0659 +0.4 1.5 Uncharacterized membrane protein, required for colicin V production compare
Echvi_4307 +0.4 1.9 Uncharacterized protein conserved in bacteria compare
Echvi_1930 +0.4 1.0 DNA repair proteins compare
Echvi_4400 +0.4 3.4 nucleotide sugar dehydrogenase compare
Echvi_1804 +0.4 2.8 Outer membrane lipoprotein-sorting protein compare
Echvi_4140 +0.4 1.9 Copper chaperone compare
Echvi_3550 +0.4 2.8 Glycosyltransferase compare
Echvi_1869 +0.4 2.0 mannonate dehydratase compare
Echvi_2225 +0.4 0.6 Transposase DDE domain./Transposase domain (DUF772). compare
Echvi_3927 +0.4 1.9 Predicted nucleoside-diphosphate-sugar epimerases compare
Echvi_0509 +0.4 1.8 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) compare
Echvi_1062 +0.4 2.8 hypothetical protein compare
Echvi_2250 +0.4 2.1 hypothetical protein compare
Echvi_0862 +0.4 3.0 Glutamate dehydrogenase/leucine dehydrogenase compare
Echvi_1277 +0.4 1.6 Acetyltransferases, including N-acetylases of ribosomal proteins compare
Echvi_4099 +0.4 0.6 hypothetical protein compare
Echvi_0830 +0.4 2.6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family compare
Echvi_3472 +0.4 2.1 Universal stress protein UspA and related nucleotide-binding proteins compare
Echvi_3335 +0.4 1.9 flavoprotein, HI0933 family compare
Echvi_2932 +0.4 1.6 hypothetical protein compare
Echvi_1888 +0.4 3.3 hypothetical protein compare
Echvi_2924 +0.4 2.7 AraC-type DNA-binding domain-containing proteins compare
Echvi_0837 +0.4 1.7 RNA polymerase sigma factor, sigma-70 family compare
Echvi_0733 +0.4 3.2 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_3252 +0.4 1.5 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_0776 +0.4 2.6 Sterol desaturase compare
Echvi_1298 +0.4 2.3 hypothetical protein compare
Echvi_0954 +0.4 3.2 SusD family. compare
Echvi_1002 +0.4 2.6 Protein-tyrosine-phosphatase compare
Echvi_0650 +0.4 0.8 thioredoxin compare
Echvi_3034 +0.4 1.3 conserved hypothetical protein compare
Echvi_2252 +0.4 1.8 Mg-chelatase subunit ChlD compare
Echvi_1435 +0.4 1.9 hypothetical protein compare
Echvi_0135 +0.4 2.1 Uncharacterized protein conserved in bacteria compare
Echvi_0426 +0.4 2.2 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Thallium(I) acetate in Echinicola vietnamensis KMM 6221, DSM 17526

For stress Thallium(I) acetate across organisms