Experiment set1IT028 for Pontibacter actiniarum KMM 6156, DSM 19842

marine broth with Paraquat dichloride 0.025 mg/ml

Group: stress
Media: marine_broth_2216 + Paraquat dichloride (0.025 mg/ml)
Culturing: Ponti_ML7, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 4.9 generations
By: Adam on 29-Mar-17
Media components: 5 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.1 g/L Ferric citrate, 19.45 g/L Sodium Chloride, 5.9 g/L Magnesium chloride hexahydrate, 3.24 g/L Magnesium sulfate, 1.8 g/L Calcium chloride, 0.55 g/L Potassium Chloride, 0.16 g/L Sodium bicarbonate, 0.08 g/L Potassium bromide, 34 mg/L Strontium chloride, 22 mg/L Boric Acid, 4 mg/L Sodium metasilicate, 2.4 mg/L sodium fluoride, 8 mg/L Disodium phosphate
Growth plate: 1731 C2

Specific Phenotypes

For 5 genes in this experiment

For stress Paraquat dichloride in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Paraquat dichloride across organisms

SEED Subsystems

Subsystem	#Specific
DNA repair, bacterial MutL-MutS system	1
Glycine reductase, sarcosine reductase and betaine reductase	1
Soluble cytochromes and functionally related electron carriers	1
Thioredoxin-disulfide reductase	1
Wyeosine-MimG Biosynthesis	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Pyrimidine metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
thioredoxin pathway	2	1	1