Experiment set1IT025 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with sodium fluoride 12.5 mM

200 most detrimental genes:

  gene name fitness t score description  
CA264_18775 +1.1 2.3 hypothetical protein compare
CA264_19875 +1.1 3.5 RNA methyltransferase compare
CA264_10520 +0.8 2.2 molybdopterin synthase sulfur carrier subunit compare
CA264_16440 +0.7 1.3 hypothetical protein compare
CA264_15000 +0.7 1.2 single-stranded DNA-binding protein compare
CA264_14805 +0.7 2.0 DNA-binding protein compare
CA264_20935 +0.6 0.6 transcriptional regulator compare
CA264_18945 +0.6 1.5 hypothetical protein compare
CA264_20125 +0.6 3.5 hypothetical protein compare
CA264_10325 +0.6 1.7 plasmid mobilization relaxosome protein MobC compare
CA264_13825 +0.6 1.3 hypothetical protein compare
CA264_21185 +0.6 2.4 hypothetical protein compare
CA264_12155 +0.6 1.4 histidine phosphatase family protein compare
CA264_02575 +0.6 2.0 potassium transporter KefB compare
CA264_13000 +0.6 1.2 cupin compare
CA264_17305 +0.5 2.2 hypothetical protein compare
CA264_13870 +0.5 1.6 hypothetical protein compare
CA264_13185 +0.5 2.1 hypothetical protein compare
CA264_01940 +0.5 1.9 antibiotic biosynthesis monooxygenase compare
CA264_20420 +0.5 2.2 thiazole synthase compare
CA264_11970 +0.5 1.6 hypothetical protein compare
CA264_13420 +0.5 1.0 hypothetical protein compare
CA264_11695 +0.5 1.8 cell filamentation protein Fic compare
CA264_13670 +0.5 2.0 DNA starvation/stationary phase protection protein compare
CA264_04285 +0.5 1.2 hypothetical protein compare
CA264_20805 +0.5 2.2 hypothetical protein compare
CA264_20570 +0.5 1.1 inorganic pyrophosphatase compare
CA264_19630 +0.5 1.8 hypothetical protein compare
CA264_11890 +0.5 1.6 NADH oxidase compare
CA264_15720 +0.5 1.8 phosphohistidine phosphatase compare
CA264_16055 +0.5 2.1 hypothetical protein compare
CA264_03485 +0.5 1.6 dodecin compare
CA264_00085 +0.5 2.0 hypothetical protein compare
CA264_02900 +0.5 1.5 hypothetical protein compare
CA264_09375 +0.5 1.2 transcriptional regulator compare
CA264_16240 +0.5 2.5 hypothetical protein compare
CA264_20685 +0.5 2.3 transposase compare
CA264_06445 +0.5 1.4 NUDIX hydrolase compare
CA264_04740 +0.5 1.5 arsenate reductase (glutaredoxin) compare
CA264_11655 +0.5 0.7 hypothetical protein compare
CA264_15190 +0.5 1.5 hypothetical protein compare
CA264_20285 +0.5 0.9 hypothetical protein compare
CA264_09965 +0.4 1.0 conjugal transfer protein TraI compare
CA264_02580 +0.4 1.5 transcriptional regulator compare
CA264_12290 +0.4 1.6 hypothetical protein compare
CA264_17955 +0.4 1.9 hypothetical protein compare
CA264_21275 +0.4 1.5 hypothetical protein compare
CA264_12700 +0.4 2.1 RNA 2',3'-cyclic phosphodiesterase compare
CA264_01970 +0.4 1.8 multidrug ABC transporter ATP-binding protein compare
CA264_06330 +0.4 1.3 cation:proton antiporter compare
CA264_00560 +0.4 1.9 hypothetical protein compare
CA264_01855 +0.4 1.7 carbonic anhydrase compare
CA264_07645 +0.4 2.4 hypothetical protein compare
CA264_16855 +0.4 1.8 hypothetical protein compare
CA264_02195 +0.4 1.8 dioxygenase compare
CA264_12310 +0.4 0.7 NifU family protein compare
CA264_19960 +0.4 1.7 NUDIX hydrolase compare
CA264_08250 +0.4 2.1 hypothetical protein compare
CA264_20945 +0.4 1.2 hypothetical protein compare
CA264_21460 +0.4 0.9 hypothetical protein compare
CA264_02635 +0.4 1.0 hypothetical protein compare
CA264_01090 +0.4 2.0 hypothetical protein compare
CA264_12725 +0.4 2.2 hypothetical protein compare
CA264_19815 +0.4 1.6 hypothetical protein compare
CA264_16905 +0.4 1.1 hypothetical protein compare
CA264_21450 +0.4 2.1 hypothetical protein compare
CA264_20505 +0.4 1.6 hypothetical protein compare
CA264_11935 +0.4 1.7 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
CA264_10045 +0.4 1.2 hypothetical protein compare
CA264_06530 +0.4 1.6 peptidase compare
CA264_18460 +0.4 1.4 hypothetical protein compare
CA264_00245 +0.4 1.3 hypothetical protein compare
CA264_06610 +0.4 1.2 iron-dependent repressor compare
CA264_20385 +0.4 2.0 methyltransferase compare
CA264_05630 +0.4 1.6 glycerol-3-phosphate dehydrogenase compare
CA264_01795 +0.4 1.6 hypothetical protein compare
CA264_14560 +0.4 0.9 VanZ family protein compare
CA264_16465 +0.4 1.6 hypothetical protein compare
CA264_02700 +0.4 1.6 TIGR02453 family protein compare
CA264_20135 +0.4 2.3 hypothetical protein compare
CA264_20530 +0.4 1.7 hypothetical protein compare
CA264_09730 +0.4 1.0 hypothetical protein compare
CA264_16575 +0.4 1.1 hypothetical protein compare
CA264_08620 +0.3 1.2 hypothetical protein compare
CA264_14925 +0.3 0.9 hypothetical protein compare
CA264_04155 +0.3 1.2 hypothetical protein compare
CA264_11360 +0.3 1.8 hypothetical protein compare
CA264_08780 +0.3 2.7 hypothetical protein compare
CA264_21225 +0.3 0.5 hypothetical protein compare
CA264_08680 +0.3 1.9 glycoside hydrolase compare
CA264_04475 +0.3 0.7 cold-shock protein compare
CA264_13625 +0.3 1.2 N-acetyltransferase compare
CA264_06195 +0.3 1.7 YqaE/Pmp3 family membrane protein compare
CA264_09710 +0.3 0.8 transcriptional regulator compare
CA264_13665 +0.3 2.0 hypothetical protein compare
CA264_08475 +0.3 1.0 hypothetical protein compare
CA264_06925 +0.3 1.6 acetolactate synthase small subunit compare
CA264_00905 +0.3 1.1 hypothetical protein compare
CA264_04120 +0.3 1.5 hypothetical protein compare
CA264_09150 +0.3 1.3 Crp/Fnr family transcriptional regulator compare
CA264_00765 +0.3 1.1 hypothetical protein compare
CA264_20460 +0.3 1.4 hypothetical protein compare
CA264_17205 +0.3 0.6 diacylglycerol kinase compare
CA264_08080 +0.3 1.4 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
CA264_12100 +0.3 2.0 NUDIX hydrolase compare
CA264_14295 +0.3 1.9 multidrug ABC transporter ATP-binding protein compare
CA264_03405 +0.3 1.5 hypothetical protein compare
CA264_13790 +0.3 1.2 hypothetical protein compare
CA264_05500 +0.3 1.2 hypothetical protein compare
CA264_07485 +0.3 1.0 septal ring lytic transglycosylase RlpA family lipoprotein compare
CA264_11525 +0.3 1.3 hypothetical protein compare
CA264_18020 +0.3 1.3 ABC transporter permease compare
CA264_10600 +0.3 0.9 hypothetical protein compare
CA264_03810 +0.3 0.8 hypothetical protein compare
CA264_18810 +0.3 1.4 hypothetical protein compare
CA264_02595 +0.3 0.9 oxidoreductase compare
CA264_03990 +0.3 1.9 alkyl hydroperoxide reductase compare
CA264_06845 +0.3 0.5 hypothetical protein compare
CA264_01140 +0.3 1.3 antibiotic resistance protein MarC compare
CA264_06095 +0.3 0.5 hypothetical protein compare
CA264_10160 +0.3 1.1 STAS/SEC14 domain-containing protein compare
CA264_02920 +0.3 1.3 response regulator compare
CA264_06600 +0.3 2.2 glycosyltransferase compare
CA264_10315 +0.3 1.0 DNA-binding protein compare
CA264_01835 +0.3 0.9 GNAT family N-acetyltransferase compare
CA264_21335 +0.3 0.5 hypothetical protein compare
CA264_16450 +0.3 1.0 hypothetical protein compare
CA264_08805 +0.3 0.8 inosine/xanthosine triphosphatase compare
CA264_02600 +0.3 1.2 DsbA family protein compare
CA264_16075 +0.3 1.5 hypothetical protein compare
CA264_20405 +0.3 1.6 thiamine phosphate synthase compare
CA264_20070 +0.3 1.7 hypothetical protein compare
CA264_14730 +0.3 1.9 hypothetical protein compare
CA264_07540 +0.3 2.2 hypothetical protein compare
CA264_04145 +0.3 1.2 hypothetical protein compare
CA264_21630 +0.3 1.1 hypothetical protein compare
CA264_20925 +0.3 0.4 hypothetical protein compare
CA264_04170 +0.3 1.6 cation transporter compare
CA264_01545 +0.3 0.8 3-deoxy-7-phosphoheptulonate synthase compare
CA264_09705 +0.3 1.3 NAD-dependent dehydratase compare
CA264_06630 +0.3 1.1 hypothetical protein compare
CA264_12220 +0.3 1.8 NAD-dependent dehydratase compare
CA264_01025 +0.3 0.3 hypothetical protein compare
CA264_09330 +0.3 0.8 cold-shock protein compare
CA264_04260 +0.3 1.9 NADH-quinone oxidoreductase subunit C/D compare
CA264_21470 +0.3 1.5 hypothetical protein compare
CA264_14910 +0.3 0.7 30S ribosomal protein THX compare
CA264_17570 +0.3 1.3 TIGR00266 family protein compare
CA264_07520 +0.3 1.4 DNA-binding response regulator compare
CA264_11175 +0.3 1.2 hypothetical protein compare
CA264_15530 +0.3 1.0 hypothetical protein compare
CA264_16770 +0.3 1.2 hypothetical protein compare
CA264_21140 +0.3 1.3 6-phosphogluconate dehydrogenase (decarboxylating) compare
CA264_17310 +0.3 1.4 hypothetical protein compare
CA264_02500 +0.3 0.5 hypothetical protein compare
CA264_20190 +0.3 1.3 dolichol-phosphate mannosyltransferase compare
CA264_12005 +0.3 0.6 hypothetical protein compare
CA264_14955 +0.3 0.8 endonuclease III compare
CA264_17370 +0.3 1.5 hypothetical protein compare
CA264_00430 +0.2 1.0 hypothetical protein compare
CA264_13330 +0.2 0.7 hypothetical protein compare
CA264_05455 +0.2 0.9 hypothetical protein compare
CA264_04095 +0.2 1.0 GAF domain-containing protein compare
CA264_11715 +0.2 0.9 hypothetical protein compare
CA264_12315 +0.2 1.2 fumarylacetoacetase compare
CA264_11860 +0.2 1.4 hypothetical protein compare
CA264_05105 +0.2 1.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
CA264_02590 +0.2 1.3 ribosomal subunit interface protein compare
CA264_00680 +0.2 1.5 alpha/beta hydrolase compare
CA264_03790 +0.2 0.8 hypothetical protein compare
CA264_07370 +0.2 1.3 TetR family transcriptional regulator compare
CA264_00130 +0.2 1.6 glyoxalase compare
CA264_21555 +0.2 1.0 phosphoribosylpyrophosphate synthetase compare
CA264_14000 +0.2 1.2 xylose isomerase compare
CA264_15520 +0.2 0.8 hypothetical protein compare
CA264_20980 +0.2 0.9 conjugal transfer protein compare
CA264_17690 +0.2 1.6 hypothetical protein compare
CA264_09545 +0.2 0.5 hypothetical protein compare
CA264_15040 +0.2 1.2 four helix bundle protein compare
CA264_20795 +0.2 1.2 hypothetical protein compare
CA264_17240 +0.2 0.8 hypothetical protein compare
CA264_16330 +0.2 1.5 hypothetical protein compare
CA264_00095 +0.2 1.1 response regulator compare
CA264_07605 +0.2 0.8 response regulator compare
CA264_10695 +0.2 0.9 anti-sigma regulatory factor compare
CA264_06005 +0.2 1.5 RES superfamily protein compare
CA264_18075 +0.2 1.4 3-dehydro-L-gulonate 2-dehydrogenase compare
CA264_00695 +0.2 1.2 cytochrome-c peroxidase compare
CA264_11685 +0.2 1.6 hypothetical protein compare
CA264_00940 +0.2 0.5 hypothetical protein compare
CA264_08800 +0.2 1.4 kinase inhibitor compare
CA264_15965 +0.2 0.8 hypothetical protein compare
CA264_02280 +0.2 1.2 ATP-binding protein compare
CA264_19855 +0.2 1.8 hypothetical protein compare
CA264_12195 +0.2 1.4 DoxX family protein compare
CA264_09285 +0.2 1.2 anti-anti-sigma factor compare
CA264_18275 +0.2 0.7 hypothetical protein compare
CA264_06035 +0.2 0.9 hypothetical protein compare
CA264_07920 +0.2 1.7 response regulator compare
CA264_12950 +0.2 1.5 peptidase S8 compare


Specific Phenotypes

For 1 genes in this experiment

For stress sodium fluoride in Pontibacter actiniarum KMM 6156, DSM 19842

For stress sodium fluoride across organisms