Experiment set1IT024 for Variovorax sp. OAS795

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4-Hydroxybenzoic Acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
ABID97_RS24195 -5.8 -5.6 3-oxoacid CoA-transferase subunit B conserved
ABID97_RS24200 -4.5 -6.8 3-oxoacid CoA-transferase subunit A conserved
ABID97_RS14945 -4.5 -14.1 4-hydroxybenzoate 3-monooxygenase conserved
ABID97_RS24380 -4.0 -14.4 protocatechuate 3,4-dioxygenase subunit beta conserved
ABID97_RS20740 -3.9 -8.3 FUSC family membrane protein compare
ABID97_RS08770 -3.7 -11.9 histidinol-phosphate transaminase compare
ABID97_RS24375 -3.7 -10.3 LysR substrate-binding domain-containing protein conserved
ABID97_RS19895 -3.7 -5.4 histone deacetylase family protein compare
ABID97_RS24945 -3.5 -8.4 cation diffusion facilitator family transporter compare
ABID97_RS08550 -3.0 -17.2 aconitate hydratase AcnA compare
ABID97_RS01420 -3.0 -12.6 cyclopropane-fatty-acyl-phospholipid synthase family protein conserved
ABID97_RS19925 -2.6 -7.8 ABC transporter substrate-binding protein compare
ABID97_RS03790 -2.4 -9.5 branched-chain amino acid transaminase compare
ABID97_RS21060 -2.1 -6.4 DUF427 domain-containing protein compare
ABID97_RS19950 -1.8 -5.6 ABC transporter ATP-binding protein compare
ABID97_RS13985 -1.7 -6.9 polyhydroxyalkanoate depolymerase conserved
ABID97_RS05865 -1.6 -6.9 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein conserved
ABID97_RS02075 -1.6 -5.6 DUF3717 domain-containing protein compare
ABID97_RS14080 -1.2 -8.2 M3 family metallopeptidase compare
ABID97_RS17725 +1.0 6.3 tripartite tricarboxylate transporter permease compare
ABID97_RS05360 +1.2 5.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB compare
ABID97_RS20390 +1.2 6.2 DHA2 family efflux MFS transporter permease subunit compare
ABID97_RS06495 +1.6 7.8 histidine phosphatase family protein compare
ABID97_RS16305 +1.6 6.2 response regulator compare
ABID97_RS23730 +1.7 7.4 tetratricopeptide repeat protein compare
ABID97_RS25150 +1.9 7.0 thioredoxin family protein compare
ABID97_RS00880 +2.0 11.9 AMP nucleosidase compare
ABID97_RS04360 +3.7 22.7 helicase SNF2 compare
ABID97_RS00735 +3.8 26.2 LysR family transcriptional regulator compare


Specific phenotypes for carbon source 4-Hydroxybenzoic Acid across organisms