Experiment set1IT024 for Rhizobium sp. OAE497

Compare to:

D-Glucuronic Acid carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS11950 -6.2 -6.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS18590 -5.9 -12.6 homoserine O-succinyltransferase compare
ABIE40_RS19050 -5.8 -9.8 3-isopropylmalate dehydrogenase compare
ABIE40_RS12845 -5.7 -3.9 glycosyltransferase family 4 protein compare
ABIE40_RS18380 -5.6 -13.1 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS06555 -5.6 -3.3 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS18920 -5.6 -6.7 glutamate 5-kinase compare
ABIE40_RS09545 -5.4 -3.7 anthranilate phosphoribosyltransferase compare
ABIE40_RS13330 -5.4 -12.5 2-isopropylmalate synthase compare
ABIE40_RS00245 -5.3 -11.8 prephenate dehydratase compare
ABIE40_RS10725 -5.1 -3.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS01970 -5.1 -3.5 acetylglutamate kinase compare
ABIE40_RS02325 -5.1 -3.5 ornithine carbamoyltransferase compare
ABIE40_RS02340 -5.0 -14.1 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS17530 -5.0 -5.9 diaminopimelate decarboxylase compare
ABIE40_RS19435 -5.0 -2.9 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS16320 -5.0 -4.8 histidinol-phosphatase compare
ABIE40_RS20460 -5.0 -3.4 precorrin-3B synthase compare
ABIE40_RS02725 -4.9 -5.9 histidinol dehydrogenase compare
ABIE40_RS09660 -4.9 -13.8 AI-2E family transporter compare
ABIE40_RS10720 -4.9 -3.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS11105 -4.8 -3.3 cobyrinate a,c-diamide synthase compare
ABIE40_RS09150 -4.8 -18.1 nitrite/sulfite reductase compare
ABIE40_RS03665 -4.8 -4.7 ATP phosphoribosyltransferase compare
ABIE40_RS19355 -4.8 -5.0 thioredoxin compare
ABIE40_RS11175 -4.8 -3.3 cobyric acid synthase compare
ABIE40_RS19415 -4.7 -15.3 phosphoenolpyruvate carboxykinase compare
ABIE40_RS09725 -4.7 -3.2 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS03660 -4.7 -5.6 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS10180 -4.7 -3.2 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS06560 -4.6 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS19460 -4.6 -4.5 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS19330 -4.6 -3.2 phosphoribosylanthranilate isomerase compare
ABIE40_RS13410 -4.6 -3.2 anthranilate synthase compare
ABIE40_RS11165 -4.6 -3.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS09360 -4.5 -3.1 excinuclease ABC subunit UvrA compare
ABIE40_RS11495 -4.5 -3.1 acetolactate synthase 3 large subunit compare
ABIE40_RS19440 -4.4 -4.3 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS20440 -4.4 -3.0 cobalt-precorrin-6A reductase compare
ABIE40_RS11095 -4.3 -3.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS20435 -4.3 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS18925 -4.3 -5.9 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS17595 -4.3 -2.9 histidinol-phosphate transaminase compare
ABIE40_RS11150 -4.2 -9.4 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS30700 -4.1 -1.4 hypothetical protein compare
ABIE40_RS16070 -4.1 -3.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS19130 -4.1 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS19040 -4.0 -8.6 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS20455 -4.0 -2.3 precorrin-8X methylmutase compare
ABIE40_RS11155 -4.0 -5.5 cobaltochelatase subunit CobN compare
ABIE40_RS19450 -4.0 -3.9 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS03405 -4.0 -2.7 anti-sigma factor compare
ABIE40_RS20430 -4.0 -2.7 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS14985 -3.9 -2.6 glycosyltransferase compare
ABIE40_RS08005 -3.9 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS12135 -3.8 -2.6 methionine synthase compare
ABIE40_RS06930 -3.8 -5.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS18280 -3.8 -4.0 heme ABC exporter ATP-binding protein CcmA compare
ABIE40_RS26335 -3.8 -9.6 sigma-54 dependent transcriptional regulator compare
ABIE40_RS10390 -3.8 -2.6 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS06730 -3.8 -4.7 riboflavin synthase compare
ABIE40_RS19455 -3.8 -2.7 DUF2628 domain-containing protein compare
ABIE40_RS06270 -3.8 -8.3 amidophosphoribosyltransferase compare
ABIE40_RS16645 -3.7 -16.6 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS04070 -3.7 -6.5 heme o synthase compare
ABIE40_RS12855 -3.6 -10.6 glycosyltransferase family 2 protein compare
ABIE40_RS17650 -3.6 -6.0 cobaltochelatase subunit CobS compare
ABIE40_RS03335 -3.6 -15.7 CoA-acylating methylmalonate-semialdehyde dehydrogenase compare
ABIE40_RS14455 -3.6 -4.1 NepR family anti-sigma factor compare
ABIE40_RS05430 -3.6 -2.4 phosphoribosylamine--glycine ligase compare
ABIE40_RS24490 -3.5 -1.7 flavin reductase compare
ABIE40_RS19795 -3.5 -4.2 cyclic nucleotide-binding domain-containing protein compare
ABIE40_RS08635 -3.5 -14.1 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS01730 -3.5 -2.7 NifU family protein compare
ABIE40_RS02320 -3.5 -5.7 aspartate aminotransferase family protein compare
ABIE40_RS05680 -3.4 -7.3 cytochrome c maturation protein CcmE compare
ABIE40_RS09155 -3.4 -3.9 DUF934 domain-containing protein compare
ABIE40_RS11020 -3.4 -10.8 substrate-binding domain-containing protein compare
ABIE40_RS19445 -3.4 -3.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS10345 -3.4 -6.4 RNA polymerase-binding protein DksA compare
ABIE40_RS09095 -3.4 -5.5 PAS domain-containing sensor histidine kinase compare
ABIE40_RS10155 -3.4 -2.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS14990 -3.4 -10.7 glycosyltransferase family 2 protein compare
ABIE40_RS17590 -3.4 -2.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS14955 -3.3 -12.1 sugar transferase compare
ABIE40_RS08140 -3.3 -15.3 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS00580 -3.3 -3.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS17525 -3.3 -2.5 lipoprotein compare
ABIE40_RS20465 -3.2 -3.8 precorrin-6A synthase (deacetylating) compare
ABIE40_RS26345 -3.2 -14.5 dicarboxylate/amino acid:cation symporter compare
ABIE40_RS16570 -3.2 -4.0 tetratricopeptide repeat protein compare
ABIE40_RS19395 -3.1 -3.7 PTS sugar transporter subunit IIA compare
ABIE40_RS14850 -3.1 -9.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS05685 -3.1 -12.3 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS16655 -3.1 -5.5 creatininase family protein compare
ABIE40_RS20905 -3.1 -6.4 IclR family transcriptional regulator compare
ABIE40_RS20445 -3.1 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS04115 -3.0 -2.2 ribonuclease HI compare
ABIE40_RS08425 -3.0 -3.6 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS04060 -3.0 -13.1 cytochrome c oxidase subunit II compare
ABIE40_RS18290 -3.0 -13.3 heme ABC transporter permease compare
ABIE40_RS18300 -3.0 -10.2 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS23250 -3.0 -10.6 hypothetical protein compare
ABIE40_RS18880 -3.0 -13.5 UDP-glucose 4-epimerase GalE compare
ABIE40_RS07200 -3.0 -2.1 NADH-quinone oxidoreductase subunit E compare
ABIE40_RS04470 -2.9 -13.6 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS09140 -2.9 -8.9 siroheme synthase CysG compare
ABIE40_RS24380 -2.9 -11.1 FGGY-family carbohydrate kinase compare
ABIE40_RS00725 -2.9 -5.1 DNA cytosine methyltransferase compare
ABIE40_RS05690 -2.9 -4.8 cytochrome c-type biogenesis protein compare
ABIE40_RS08645 -2.9 -7.2 LL-diaminopimelate aminotransferase compare
ABIE40_RS04465 -2.8 -14.1 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS13130 -2.8 -10.4 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS12115 -2.8 -2.7 GntR family transcriptional regulator compare
ABIE40_RS06725 -2.8 -5.7 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS02075 -2.8 -11.8 ROK family transcriptional regulator compare
ABIE40_RS18055 -2.7 -4.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS06915 -2.7 -12.3 COX15/CtaA family protein compare
ABIE40_RS06265 -2.7 -2.3 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS03250 -2.7 -1.5 hypothetical protein compare
ABIE40_RS15455 -2.7 -1.9 histidine phosphatase family protein compare
ABIE40_RS06050 -2.7 -5.7 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS17645 -2.7 -5.2 cobaltochelatase subunit CobT compare
ABIE40_RS04080 -2.7 -10.3 cytochrome c oxidase assembly protein compare
ABIE40_RS20450 -2.7 -2.7 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS14855 -2.7 -8.3 NAD-dependent epimerase compare
ABIE40_RS20635 -2.7 -4.0 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS13120 -2.6 -9.2 cytochrome c1 compare
ABIE40_RS09090 -2.6 -7.2 nitrogen regulation protein NR(I) compare
ABIE40_RS09540 -2.6 -7.5 peptidylprolyl isomerase compare
ABIE40_RS04065 -2.6 -12.8 cytochrome c oxidase subunit I compare
ABIE40_RS23940 -2.6 -6.6 TetR/AcrR family transcriptional regulator compare
ABIE40_RS19260 -2.6 -3.0 DNA polymerase III subunit epsilon compare
ABIE40_RS04475 -2.6 -11.5 phosphoadenylyl-sulfate reductase compare
ABIE40_RS18720 -2.6 -2.4 polyprenyl synthetase family protein compare
ABIE40_RS19615 -2.5 -2.1 DUF1109 domain-containing protein compare
ABIE40_RS01860 -2.5 -11.4 RNA polymerase factor sigma-54 compare
ABIE40_RS13125 -2.5 -12.9 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS01930 -2.5 -2.3 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS17020 -2.5 -7.6 sugar-binding transcriptional regulator compare
ABIE40_RS11060 -2.5 -4.7 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS08865 -2.5 -8.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS07475 -2.4 -2.2 NADH:ubiquinone oxidoreductase subunit NDUFA12 compare
ABIE40_RS09170 -2.4 -5.3 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS04085 -2.4 -8.1 cytochrome c oxidase subunit 3 compare
ABIE40_RS08970 -2.4 -9.0 citrate synthase compare
ABIE40_RS08935 -2.3 -2.7 RIP metalloprotease RseP compare
ABIE40_RS14705 -2.3 -7.1 ABC transporter ATP-binding protein compare
ABIE40_RS19360 -2.3 -4.5 double-strand break repair helicase AddA compare
ABIE40_RS00235 -2.3 -5.2 cytochrome c family protein compare
ABIE40_RS05995 -2.3 -9.9 MurR/RpiR family transcriptional regulator compare
ABIE40_RS09720 -2.3 -4.2 GTP cyclohydrolase I FolE compare
ABIE40_RS14980 -2.2 -4.2 glycoside hydrolase family 16 protein compare
ABIE40_RS17515 -2.2 -5.6 TlpA disulfide reductase family protein compare
ABIE40_RS09085 -2.2 -6.2 nitrogen regulation protein NR(II) compare
ABIE40_RS11960 -2.2 -2.1 energy-dependent translational throttle protein EttA compare
ABIE40_RS19700 -2.2 -3.2 MBL fold metallo-hydrolase compare
ABIE40_RS14690 -2.2 -11.3 branched-chain amino acid ABC transporter substrate-binding protein conserved
ABIE40_RS24355 -2.2 -6.4 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS03485 -2.2 -13.3 MAPEG family protein compare
ABIE40_RS21985 -2.2 -5.1 MarR family transcriptional regulator compare
ABIE40_RS07270 -2.1 -7.5 DUF1467 family protein compare
ABIE40_RS19480 -2.1 -3.1 DUF1402 family protein compare
ABIE40_RS00490 -2.0 -8.8 DNA polymerase I compare
ABIE40_RS09980 -2.0 -2.6 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS18285 -2.0 -4.2 heme exporter protein CcmB compare
ABIE40_RS12360 -2.0 -9.6 DUF5131 family protein compare
ABIE40_RS26150 -2.0 -1.1 hypothetical protein compare
ABIE40_RS02580 -1.9 -12.9 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABIE40_RS24310 -1.9 -6.6 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS30895 -1.9 -1.3 cytochrome o ubiquinol oxidase subunit IV compare
ABIE40_RS19365 -1.9 -3.3 double-strand break repair protein AddB compare
ABIE40_RS12925 -1.8 -9.4 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS09145 -1.8 -3.8 DUF2849 domain-containing protein compare
ABIE40_RS10425 -1.8 -4.1 ABC transporter ATP-binding protein compare
ABIE40_RS25740 -1.8 -7.0 FadR/GntR family transcriptional regulator compare
ABIE40_RS01015 -1.8 -2.4 NrsF family protein compare
ABIE40_RS15590 -1.7 -3.4 tol-pal system protein YbgF compare
ABIE40_RS15560 -1.7 -5.2 phosphoglycerate dehydrogenase compare
ABIE40_RS18640 -1.7 -8.0 M48 family metalloprotease compare
ABIE40_RS18685 -1.7 -3.5 beta-ketoacyl-ACP reductase compare
ABIE40_RS14015 -1.7 -10.5 ROK family transcriptional regulator compare
ABIE40_RS14710 -1.7 -9.2 high-affinity branched-chain amino acid ABC transporter permease LivM compare
ABIE40_RS18005 -1.6 -8.7 cell division protein ZapE compare
ABIE40_RS28815 -1.6 -4.6 GNAT family N-acetyltransferase compare
ABIE40_RS22660 -1.6 -2.8 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
ABIE40_RS05670 -1.6 -6.0 membrane protein compare
ABIE40_RS21620 -1.6 -4.7 FadR/GntR family transcriptional regulator compare
ABIE40_RS09280 -1.6 -6.0 FadR/GntR family transcriptional regulator compare
ABIE40_RS29110 -1.6 -2.3 GFA family protein compare
ABIE40_RS15730 -1.6 -2.4 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS14700 -1.6 -5.3 ABC transporter ATP-binding protein compare
ABIE40_RS22100 -1.6 -1.6 helix-turn-helix domain-containing protein compare
ABIE40_RS25870 -1.6 -3.7 NUDIX domain-containing protein compare
ABIE40_RS15010 -1.6 -6.8 metallophosphoesterase compare
ABIE40_RS18735 -1.5 -4.5 TetR/AcrR family transcriptional regulator compare
ABIE40_RS25880 -1.5 -4.8 ROK family transcriptional regulator compare
ABIE40_RS02585 -1.5 -7.9 acetyl-CoA C-acetyltransferase compare
ABIE40_RS10415 -1.5 -5.9 ABC-type transport auxiliary lipoprotein family protein compare
ABIE40_RS14715 -1.5 -7.7 branched-chain amino acid ABC transporter permease LivH compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source D-Glucuronic Acid in Rhizobium sp. OAE497

For carbon source D-Glucuronic Acid across organisms