Experiment set1IT021 for Rhizobium sp. OAE497

Compare to:

5-Keto-D-Gluconic Acid potassium salt carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS01880 -7.1 -4.9 ribokinase compare
ABIE40_RS19050 -6.2 -7.4 3-isopropylmalate dehydrogenase compare
ABIE40_RS18380 -6.0 -9.2 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS13330 -6.0 -4.1 2-isopropylmalate synthase compare
ABIE40_RS18590 -5.9 -11.9 homoserine O-succinyltransferase compare
ABIE40_RS17525 -5.9 -3.7 lipoprotein compare
ABIE40_RS02340 -5.8 -9.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS00245 -5.8 -8.8 prephenate dehydratase compare
ABIE40_RS18920 -5.5 -7.2 glutamate 5-kinase compare
ABIE40_RS09660 -5.5 -9.9 AI-2E family transporter compare
ABIE40_RS09095 -5.5 -3.8 PAS domain-containing sensor histidine kinase compare
ABIE40_RS18775 -5.5 -11.7 pyruvate carboxylase compare
ABIE40_RS19395 -5.4 -3.7 PTS sugar transporter subunit IIA compare
ABIE40_RS11950 -5.4 -7.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS06555 -5.4 -3.5 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS19040 -5.3 -6.3 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS19355 -5.3 -5.1 thioredoxin compare
ABIE40_RS09545 -5.2 -3.6 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.1 -3.5 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.1 -3.5 histidinol-phosphatase compare
ABIE40_RS03665 -5.0 -3.4 ATP phosphoribosyltransferase compare
ABIE40_RS02725 -5.0 -3.4 histidinol dehydrogenase compare
ABIE40_RS01970 -4.9 -3.4 acetylglutamate kinase compare
ABIE40_RS20460 -4.9 -3.4 precorrin-3B synthase compare
ABIE40_RS02325 -4.8 -3.3 ornithine carbamoyltransferase compare
ABIE40_RS19435 -4.8 -3.1 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS03660 -4.8 -3.3 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS00790 -4.8 -16.4 ABC transporter permease compare
ABIE40_RS00795 -4.7 -12.8 ABC transporter permease compare
ABIE40_RS10720 -4.7 -3.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19460 -4.7 -3.2 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS20450 -4.7 -3.2 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS09725 -4.5 -3.1 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS11105 -4.5 -4.4 cobyrinate a,c-diamide synthase compare
ABIE40_RS19440 -4.5 -3.1 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19330 -4.5 -3.1 phosphoribosylanthranilate isomerase compare
ABIE40_RS08140 -4.4 -13.3 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS13410 -4.4 -3.0 anthranilate synthase compare
ABIE40_RS10725 -4.4 -4.3 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS11175 -4.4 -4.3 cobyric acid synthase compare
ABIE40_RS06930 -4.3 -4.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS00785 -4.3 -15.8 ABC transporter ATP-binding protein compare
ABIE40_RS20440 -4.3 -3.0 cobalt-precorrin-6A reductase compare
ABIE40_RS11165 -4.3 -3.0 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS18925 -4.3 -5.1 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS09360 -4.3 -3.0 excinuclease ABC subunit UvrA compare
ABIE40_RS11495 -4.3 -3.0 acetolactate synthase 3 large subunit compare
ABIE40_RS20435 -4.3 -2.9 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS10345 -4.2 -4.1 RNA polymerase-binding protein DksA compare
ABIE40_RS02320 -4.2 -2.9 aspartate aminotransferase family protein compare
ABIE40_RS11150 -4.2 -7.5 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS06560 -4.2 -4.0 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS01930 -4.1 -2.6 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS17650 -4.1 -4.0 cobaltochelatase subunit CobS compare
ABIE40_RS17595 -4.1 -2.8 histidinol-phosphate transaminase compare
ABIE40_RS19450 -4.1 -2.8 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS06270 -4.1 -6.7 amidophosphoribosyltransferase compare
ABIE40_RS20455 -4.0 -2.5 precorrin-8X methylmutase compare
ABIE40_RS19130 -3.9 -2.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS00780 -3.8 -9.9 BMP family ABC transporter substrate-binding protein compare
ABIE40_RS12360 -3.8 -13.0 DUF5131 family protein compare
ABIE40_RS14985 -3.8 -2.6 glycosyltransferase compare
ABIE40_RS20465 -3.8 -2.6 precorrin-6A synthase (deacetylating) compare
ABIE40_RS10180 -3.8 -5.7 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS08005 -3.8 -2.6 dihydroxy-acid dehydratase compare
ABIE40_RS11095 -3.7 -3.6 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS03405 -3.7 -2.5 anti-sigma factor compare
ABIE40_RS19445 -3.7 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS11155 -3.6 -6.5 cobaltochelatase subunit CobN compare
ABIE40_RS17645 -3.6 -2.5 cobaltochelatase subunit CobT compare
ABIE40_RS13130 -3.6 -10.5 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS00725 -3.6 -4.2 DNA cytosine methyltransferase compare
ABIE40_RS19480 -3.5 -2.4 DUF1402 family protein compare
ABIE40_RS24310 -3.5 -9.2 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS12135 -3.5 -3.4 methionine synthase compare
ABIE40_RS19260 -3.4 -2.4 DNA polymerase III subunit epsilon compare
ABIE40_RS20430 -3.4 -3.3 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS18255 -3.4 -1.6 hypothetical protein compare
ABIE40_RS00625 -3.4 -11.7 ABC transporter permease compare
ABIE40_RS05430 -3.4 -2.3 phosphoribosylamine--glycine ligase compare
ABIE40_RS15920 -3.3 -1.2 50S ribosomal protein L31 compare
ABIE40_RS19700 -3.2 -2.2 MBL fold metallo-hydrolase compare
ABIE40_RS17590 -3.2 -2.2 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS10155 -3.2 -2.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS18055 -3.1 -3.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS14980 -3.1 -5.1 glycoside hydrolase family 16 protein compare
ABIE40_RS09170 -3.1 -5.1 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS20445 -3.1 -1.6 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS00630 -3.1 -9.1 ABC transporter ATP-binding protein compare
ABIE40_RS03335 -3.0 -14.4 CoA-acylating methylmalonate-semialdehyde dehydrogenase compare
ABIE40_RS09090 -3.0 -8.2 nitrogen regulation protein NR(I) compare
ABIE40_RS06050 -2.9 -6.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS14990 -2.9 -9.4 glycosyltransferase family 2 protein compare
ABIE40_RS09320 -2.9 -12.1 extracellular solute-binding protein compare
ABIE40_RS08635 -2.8 -12.3 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS02730 -2.8 -8.7 UPF0262 family protein compare
ABIE40_RS18290 -2.8 -13.0 heme ABC transporter permease compare
ABIE40_RS05680 -2.8 -8.7 cytochrome c maturation protein CcmE compare
ABIE40_RS11115 -2.7 -12.4 nucleoside hydrolase compare
ABIE40_RS13520 -2.7 -10.4 aspartate aminotransferase family protein compare
ABIE40_RS13370 -2.7 -9.7 CDF family cation efflux transporter EmfA compare
ABIE40_RS10390 -2.7 -2.6 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS04320 -2.7 -13.0 pyruvate, phosphate dikinase compare
ABIE40_RS14955 -2.7 -8.1 sugar transferase compare
ABIE40_RS00580 -2.7 -2.9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS16070 -2.7 -3.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS00490 -2.6 -10.0 DNA polymerase I compare
ABIE40_RS06725 -2.6 -5.1 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS00800 -2.6 -4.5 cytidine deaminase compare
ABIE40_RS16570 -2.5 -3.7 tetratricopeptide repeat protein compare
ABIE40_RS13120 -2.5 -9.4 cytochrome c1 compare
ABIE40_RS05685 -2.5 -11.6 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS09150 -2.5 -13.4 nitrite/sulfite reductase compare
ABIE40_RS09720 -2.5 -3.7 GTP cyclohydrolase I FolE compare
ABIE40_RS01765 -2.5 -5.6 [protein-PII] uridylyltransferase compare
ABIE40_RS00235 -2.4 -6.0 cytochrome c family protein compare
ABIE40_RS08500 -2.4 -2.0 preprotein translocase subunit YajC compare
ABIE40_RS06730 -2.4 -5.1 riboflavin synthase compare
ABIE40_RS11060 -2.4 -4.9 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS00620 -2.3 -9.6 microcin C ABC transporter permease YejB compare
ABIE40_RS00930 -2.3 -6.7 ABC transporter permease compare
ABIE40_RS18300 -2.3 -8.0 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS13125 -2.3 -12.7 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS16660 -2.2 -3.4 GTP-binding protein compare
ABIE40_RS09140 -2.2 -7.7 siroheme synthase CysG compare
ABIE40_RS09335 -2.2 -10.2 type I glutamate--ammonia ligase compare
ABIE40_RS04080 -2.2 -9.0 cytochrome c oxidase assembly protein compare
ABIE40_RS18880 -2.1 -10.6 UDP-glucose 4-epimerase GalE compare
ABIE40_RS05660 -2.1 -2.8 response regulator transcription factor compare
ABIE40_RS09155 -2.1 -3.0 DUF934 domain-containing protein compare
ABIE40_RS18285 -2.1 -6.0 heme exporter protein CcmB compare
ABIE40_RS08935 -2.0 -2.6 RIP metalloprotease RseP compare
ABIE40_RS04060 -2.0 -9.8 cytochrome c oxidase subunit II compare
ABIE40_RS05155 -2.0 -4.2 DUF5330 domain-containing protein compare
ABIE40_RS21840 -2.0 -1.4 lysophospholipid acyltransferase family protein compare
ABIE40_RS06915 -2.0 -10.0 COX15/CtaA family protein compare
ABIE40_RS19360 -2.0 -3.5 double-strand break repair helicase AddA compare
ABIE40_RS18720 -2.0 -2.3 polyprenyl synthetase family protein compare
ABIE40_RS01055 -1.9 -5.1 translation elongation factor 4 compare
ABIE40_RS16170 -1.9 -2.7 DUF882 domain-containing protein compare
ABIE40_RS09945 -1.9 -5.7 glycine cleavage system protein GcvH compare
ABIE40_RS12925 -1.9 -9.6 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS02305 -1.9 -5.0 phosphate signaling complex protein PhoU compare
ABIE40_RS00935 -1.9 -5.2 ABC transporter substrate-binding protein compare
ABIE40_RS04070 -1.9 -5.3 heme o synthase compare
ABIE40_RS02075 -1.9 -7.9 ROK family transcriptional regulator compare
ABIE40_RS08255 -1.8 -8.6 Lrp/AsnC family transcriptional regulator compare
ABIE40_RS27160 -1.8 -1.2 low affinity iron permease family protein compare
ABIE40_RS08260 -1.8 -9.8 alanine dehydrogenase compare
ABIE40_RS04065 -1.8 -9.7 cytochrome c oxidase subunit I compare
ABIE40_RS27255 -1.8 -2.0 hypothetical protein compare
ABIE40_RS15345 -1.8 -6.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS10035 -1.8 -3.1 DUF3971 domain-containing protein compare
ABIE40_RS19795 -1.8 -4.7 cyclic nucleotide-binding domain-containing protein compare
ABIE40_RS18640 -1.8 -7.6 M48 family metalloprotease compare
ABIE40_RS11020 -1.8 -7.7 substrate-binding domain-containing protein compare
ABIE40_RS09950 -1.8 -11.1 aminomethyl-transferring glycine dehydrogenase compare
ABIE40_RS17510 -1.8 -7.4 3-hydroxybutyryl-CoA dehydrogenase compare
ABIE40_RS26670 -1.7 -1.1 hypothetical protein compare
ABIE40_RS17290 -1.7 -7.0 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS04085 -1.7 -6.2 cytochrome c oxidase subunit 3 compare
ABIE40_RS27155 -1.6 -2.0 acetyltransferase compare
ABIE40_RS05690 -1.6 -3.7 cytochrome c-type biogenesis protein compare
ABIE40_RS11960 -1.6 -1.8 energy-dependent translational throttle protein EttA compare
ABIE40_RS24375 -1.6 -4.6 SDR family oxidoreductase compare
ABIE40_RS17515 -1.6 -4.3 TlpA disulfide reductase family protein compare
ABIE40_RS15730 -1.6 -3.0 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS24130 -1.6 -2.2 ABC transporter permease compare
ABIE40_RS14855 -1.6 -4.6 NAD-dependent epimerase compare
ABIE40_RS28105 -1.6 -2.0 hypothetical protein compare
ABIE40_RS03190 -1.6 -4.0 phosphogluconate dehydratase compare
ABIE40_RS14850 -1.5 -6.6 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS10425 -1.5 -4.1 ABC transporter ATP-binding protein compare
ABIE40_RS09570 -1.5 -2.3 MarR family transcriptional regulator compare
ABIE40_RS03485 -1.5 -8.8 MAPEG family protein compare
ABIE40_RS22300 -1.5 -4.7 superoxide dismutase compare
ABIE40_RS17370 -1.5 -1.7 hypothetical protein compare
ABIE40_RS15010 -1.5 -7.7 metallophosphoesterase compare
ABIE40_RS20905 -1.5 -4.2 IclR family transcriptional regulator compare
ABIE40_RS06775 -1.4 -3.2 DUF177 domain-containing protein compare
ABIE40_RS16665 -1.4 -5.9 WD40 repeat domain-containing protein compare
ABIE40_RS05785 -1.4 -2.0 type II toxin-antitoxin system VapB family antitoxin compare
ABIE40_RS28575 -1.4 -3.0 hypothetical protein compare
ABIE40_RS18695 -1.4 -6.1 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE40_RS17565 -1.4 -2.2 ABC transporter permease compare
ABIE40_RS30230 -1.4 -1.8 CsbD family protein compare
ABIE40_RS09940 -1.4 -6.6 glycine cleavage system aminomethyltransferase GcvT compare
ABIE40_RS09085 -1.4 -3.2 nitrogen regulation protein NR(II) compare
ABIE40_RS06720 -1.4 -1.5 transcriptional regulator NrdR compare
ABIE40_RS10430 -1.4 -7.7 MlaE family lipid ABC transporter permease subunit compare
ABIE40_RS18735 -1.3 -4.6 TetR/AcrR family transcriptional regulator compare
ABIE40_RS17585 -1.3 -2.8 DUF2125 domain-containing protein compare
ABIE40_RS09540 -1.3 -4.1 peptidylprolyl isomerase compare
ABIE40_RS24380 -1.3 -6.6 FGGY-family carbohydrate kinase compare
ABIE40_RS08980 -1.3 -3.4 transcriptional repressor LexA compare
ABIE40_RS25740 -1.3 -5.0 FadR/GntR family transcriptional regulator compare
ABIE40_RS05995 -1.3 -6.0 MurR/RpiR family transcriptional regulator compare
ABIE40_RS14785 -1.3 -2.7 hypothetical protein compare
ABIE40_RS28765 -1.3 -1.7 chemotaxis protein CheX compare
ABIE40_RS16655 -1.3 -3.8 creatininase family protein compare


Specific Phenotypes

For 16 genes in this experiment

For carbon source 5-Keto-D-Gluconic Acid potassium salt in Rhizobium sp. OAE497

For carbon source 5-Keto-D-Gluconic Acid potassium salt across organisms