Experiment set1IT021 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Cobalt chloride hexahydrate 0.15 mM

200 most detrimental genes:

  gene name fitness t score description  
CA264_01430 +3.0 20.2 transcriptional repressor compare
CA264_12310 +2.7 8.0 NifU family protein compare
CA264_17100 +1.8 5.0 hypothetical protein compare
CA264_02025 +1.7 9.3 nitroreductase compare
CA264_07030 +1.5 10.4 UDP-glucose 4-epimerase compare
CA264_08870 +1.4 5.7 imidazolonepropionase compare
CA264_15340 +1.4 3.1 hypothetical protein compare
CA264_14455 +1.4 7.5 ribosome maturation factor compare
CA264_00015 +1.3 7.4 hypothetical protein compare
CA264_04560 +1.3 10.2 histidine ammonia-lyase compare
CA264_03680 +1.3 4.1 hypothetical protein compare
CA264_07245 +1.2 8.5 hypothetical protein compare
CA264_21225 +1.2 3.3 hypothetical protein compare
CA264_10585 +1.2 3.2 hypothetical protein compare
CA264_03810 +1.1 3.5 hypothetical protein compare
CA264_05175 +1.0 3.7 hypothetical protein compare
CA264_07260 +1.0 4.2 hypothetical protein compare
CA264_03675 +1.0 4.1 hypothetical protein compare
CA264_01065 +1.0 4.3 MarR family transcriptional regulator compare
CA264_10920 +1.0 7.5 helix-turn-helix-type transcriptional regulator compare
CA264_16925 +0.9 4.3 SAM-dependent methyltransferase compare
CA264_20570 +0.9 2.1 inorganic pyrophosphatase compare
CA264_17390 +0.9 3.6 hypothetical protein compare
CA264_02415 +0.9 3.5 dethiobiotin synthase compare
CA264_13015 +0.9 7.4 sensor histidine kinase compare
CA264_06355 +0.9 6.7 ergothioneine biosynthesis protein EgtB compare
CA264_19860 +0.9 4.1 NifU family protein compare
CA264_20935 +0.9 0.8 transcriptional regulator compare
CA264_06330 +0.8 1.6 cation:proton antiporter compare
CA264_00295 +0.8 3.2 hypothetical protein compare
CA264_00500 +0.8 6.1 hypothetical protein compare
CA264_05170 +0.8 4.6 phosphohydrolase compare
CA264_08125 +0.8 5.1 tetratricopeptide repeat protein compare
CA264_07265 +0.8 6.4 patatin compare
CA264_07195 +0.8 3.0 hypothetical protein compare
CA264_02080 +0.8 1.1 hypothetical protein compare
CA264_19785 +0.8 6.1 TonB-dependent receptor compare
CA264_21045 +0.8 3.0 hypothetical protein compare
CA264_15710 +0.8 5.8 hypothetical protein compare
CA264_11715 +0.8 2.0 hypothetical protein compare
CA264_10695 +0.7 1.9 anti-sigma regulatory factor compare
CA264_17190 +0.7 1.0 methionine-R-sulfoxide reductase compare
CA264_17205 +0.7 1.5 diacylglycerol kinase compare
CA264_02465 +0.7 2.1 hypothetical protein compare
CA264_16230 +0.7 3.3 protease compare
CA264_20440 +0.7 1.1 thiamine biosynthesis protein ThiS compare
CA264_19010 +0.7 6.4 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_05300 +0.7 4.0 hypothetical protein compare
CA264_10045 +0.7 1.6 hypothetical protein compare
CA264_08945 +0.7 3.1 type 1 glutamine amidotransferase domain-containing protein compare
CA264_10005 +0.7 1.6 hypothetical protein compare
CA264_17095 +0.7 1.4 FeoB-associated Cys-rich membrane protein compare
CA264_02030 +0.6 3.8 hypothetical protein compare
CA264_06335 +0.6 2.4 Na+/H+ antiporter subunit G compare
CA264_20455 +0.6 3.8 LLM class flavin-dependent oxidoreductase compare
CA264_18410 +0.6 1.5 glycine dehydrogenase (aminomethyl-transferring) compare
CA264_20925 +0.6 1.6 hypothetical protein compare
CA264_08620 +0.6 2.3 hypothetical protein compare
CA264_18020 +0.6 1.5 ABC transporter permease compare
CA264_14560 +0.6 1.2 VanZ family protein compare
CA264_12990 +0.6 3.5 ferritin compare
CA264_15335 +0.6 5.7 SusC/RagA family TonB-linked outer membrane protein compare
CA264_18860 +0.6 4.3 TIGR00374 family protein compare
CA264_09380 +0.6 2.6 hypothetical protein compare
CA264_10580 +0.6 2.1 hypothetical protein compare
CA264_21475 +0.6 5.0 hypothetical protein compare
CA264_02615 +0.6 3.4 DNA-binding response regulator compare
CA264_14450 +0.6 2.5 endonuclease/exonuclease/phosphatase compare
CA264_12935 +0.6 1.4 serine hydrolase compare
CA264_19925 +0.6 3.7 peptidyl-prolyl cis-trans isomerase compare
CA264_12600 +0.6 3.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
CA264_21050 +0.6 1.5 hypothetical protein compare
CA264_12595 +0.6 1.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
CA264_13300 +0.6 3.7 rhomboid family intramembrane serine protease compare
CA264_17760 +0.6 4.1 leucine dehydrogenase compare
CA264_15045 +0.5 3.4 acetyl-CoA acetyltransferase compare
CA264_12005 +0.5 1.8 hypothetical protein compare
CA264_02055 +0.5 0.8 hypothetical protein compare
CA264_20490 +0.5 1.6 hypothetical protein compare
CA264_08950 +0.5 3.7 short-chain dehydrogenase/reductase compare
CA264_03905 +0.5 2.9 polysaccharide deacetylase family protein compare
CA264_00780 +0.5 1.2 glyoxalase compare
CA264_01545 +0.5 1.4 3-deoxy-7-phosphoheptulonate synthase compare
CA264_13025 +0.5 2.0 hypothetical protein compare
CA264_09355 +0.5 1.5 nitroreductase compare
CA264_01025 +0.5 1.1 hypothetical protein compare
CA264_13555 +0.5 2.4 hypothetical protein compare
CA264_21545 +0.5 1.2 AraC family transcriptional regulator compare
CA264_13020 +0.5 1.2 hypothetical protein compare
CA264_10715 +0.5 1.6 hypothetical protein compare
CA264_18030 +0.5 3.4 cation transporter compare
CA264_07665 +0.5 3.4 sulfurtransferase compare
CA264_07660 +0.5 3.4 hypothetical protein compare
CA264_16100 +0.5 0.8 hypothetical protein compare
CA264_10570 +0.5 3.2 hypothetical protein compare
CA264_12890 +0.5 1.8 iron-binding protein compare
CA264_15005 +0.5 3.5 magnesium/cobalt efflux protein compare
CA264_02620 +0.5 2.0 two-component sensor histidine kinase compare
CA264_10805 +0.5 2.2 NADPH-dependent oxidoreductase compare
CA264_00505 +0.5 3.3 hypothetical protein compare
CA264_16440 +0.5 1.5 hypothetical protein compare
CA264_18135 +0.5 3.3 ABC transporter ATP-binding protein compare
CA264_20120 +0.5 0.8 hypothetical protein compare
CA264_12870 +0.5 2.7 deoxynucleoside kinase compare
CA264_19095 +0.5 1.8 hypothetical protein compare
CA264_10070 +0.5 1.9 hypothetical protein compare
CA264_06320 +0.5 3.4 Na+/H+ antiporter subunit D compare
CA264_03285 +0.5 2.1 hypothetical protein compare
CA264_01040 +0.5 1.0 hypothetical protein compare
CA264_06315 +0.5 1.9 cation:proton antiporter compare
CA264_06475 +0.5 0.6 hypothetical protein compare
CA264_09635 +0.5 2.3 hypothetical protein compare
CA264_05500 +0.4 1.5 hypothetical protein compare
CA264_09730 +0.4 1.6 hypothetical protein compare
CA264_19545 +0.4 2.3 oxidoreductase compare
CA264_12515 +0.4 1.7 YebC/PmpR family DNA-binding transcriptional regulator compare
CA264_06450 +0.4 2.4 hypothetical protein compare
CA264_01855 +0.4 2.2 carbonic anhydrase compare
CA264_07270 +0.4 2.0 hypothetical protein compare
CA264_10975 +0.4 2.3 Pathogenesis-related transcriptional factor and ERF protein compare
CA264_21435 +0.4 1.0 hypothetical protein compare
CA264_15600 +0.4 2.3 tRNA glutamyl-Q synthetase compare
CA264_04550 +0.4 0.8 nucleoid-associated protein, YbaB/EbfC family compare
CA264_15870 +0.4 3.1 long-chain fatty acid--CoA ligase compare
CA264_14095 +0.4 3.0 transposase compare
CA264_10520 +0.4 0.7 molybdopterin synthase sulfur carrier subunit compare
CA264_15785 +0.4 1.1 hypothetical protein compare
CA264_21540 +0.4 2.4 hypothetical protein compare
CA264_20285 +0.4 0.7 hypothetical protein compare
CA264_09820 +0.4 1.9 hypothetical protein compare
CA264_21470 +0.4 2.7 hypothetical protein compare
CA264_14110 +0.4 1.4 phosphoribosyltransferase compare
CA264_10575 +0.4 1.4 hypothetical protein compare
CA264_05165 +0.4 3.5 potassium transporter KefB compare
CA264_07075 +0.4 1.9 hypothetical protein compare
CA264_21080 +0.4 2.4 heavy metal translocating P-type ATPase compare
CA264_02195 +0.4 1.7 dioxygenase compare
CA264_15330 +0.4 3.7 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_17685 +0.4 2.3 hypothetical protein compare
CA264_19060 +0.4 3.0 hypothetical protein compare
CA264_00230 +0.4 1.6 hypothetical protein compare
CA264_03300 +0.4 1.1 hypothetical protein compare
CA264_03150 +0.4 3.0 hypothetical protein compare
CA264_18750 +0.4 2.3 FmdC precursor compare
CA264_09545 +0.4 0.9 hypothetical protein compare
CA264_20345 +0.4 1.5 hypothetical protein compare
CA264_03590 +0.4 0.7 hypothetical protein compare
CA264_17240 +0.4 1.6 hypothetical protein compare
CA264_13310 +0.4 3.3 glycosyl hydrolase compare
CA264_07685 +0.4 2.2 aminotransferase class I and II compare
CA264_14355 +0.4 1.7 hypothetical protein compare
CA264_03670 +0.4 1.4 polyisoprenoid-binding protein compare
CA264_09250 +0.4 2.1 hemolysin compare
CA264_02105 +0.4 2.4 hypothetical protein compare
CA264_10600 +0.4 1.5 hypothetical protein compare
CA264_07485 +0.4 1.3 septal ring lytic transglycosylase RlpA family lipoprotein compare
CA264_00545 +0.4 1.0 peptide-methionine (R)-S-oxide reductase compare
CA264_06015 +0.4 2.0 hypothetical protein compare
CA264_14805 +0.4 0.8 DNA-binding protein compare
CA264_12520 +0.4 2.0 sodium:proton exchanger compare
CA264_21035 +0.4 3.1 mobilization protein compare
CA264_09985 +0.4 0.5 hypothetical protein compare
CA264_16075 +0.4 2.2 hypothetical protein compare
CA264_02180 +0.4 0.6 response regulator compare
CA264_18245 +0.4 0.6 NADH-quinone oxidoreductase subunit A compare
CA264_13330 +0.4 0.8 hypothetical protein compare
CA264_21535 +0.4 2.3 hypothetical protein compare
CA264_11700 +0.4 2.0 hypothetical protein compare
CA264_12350 +0.4 2.4 glycosyltransferase family 1 protein compare
CA264_00485 +0.4 2.9 peptidase M4 compare
CA264_03605 +0.4 1.4 DNA-binding protein compare
CA264_14025 +0.4 1.4 mismatch-specific DNA-glycosylase compare
CA264_12475 +0.4 2.6 alanine dehydrogenase compare
CA264_21030 +0.4 1.8 hypothetical protein compare
CA264_16875 +0.4 1.3 hypothetical protein compare
CA264_13910 +0.3 1.2 response regulator compare
CA264_07800 +0.3 1.9 hypothetical protein compare
CA264_09735 +0.3 0.8 5-hydroxyisourate hydrolase compare
CA264_11345 +0.3 1.6 aquaporin compare
CA264_20115 +0.3 1.8 phosphoribosylamine--glycine ligase compare
CA264_12155 +0.3 0.9 histidine phosphatase family protein compare
CA264_14350 +0.3 1.8 hemolysin compare
CA264_07220 +0.3 1.7 hypothetical protein compare
CA264_02575 +0.3 1.4 potassium transporter KefB compare
CA264_07920 +0.3 2.3 response regulator compare
CA264_12165 +0.3 2.4 hypothetical protein compare
CA264_15425 +0.3 1.2 DUF4834 domain-containing protein compare
CA264_15010 +0.3 1.4 gliding motility lipoprotein GldD compare
CA264_19245 +0.3 1.9 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
CA264_11585 +0.3 1.7 response regulator compare
CA264_06590 +0.3 1.7 3-hydroxybutyryl-CoA dehydrogenase compare
CA264_06205 +0.3 1.1 glutamate--cysteine ligase compare
CA264_20535 +0.3 1.2 hypothetical protein compare
CA264_21340 +0.3 2.0 hypothetical protein compare
CA264_17595 +0.3 1.7 3-hydroxyacyl-CoA dehydrogenase compare
CA264_14310 +0.3 1.7 hypothetical protein compare
CA264_08250 +0.3 1.5 hypothetical protein compare
CA264_12940 +0.3 1.4 alcohol dehydrogenase compare
CA264_20620 +0.3 2.2 mammalian cell entry protein compare
CA264_21630 +0.3 0.8 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Cobalt chloride hexahydrate in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Cobalt chloride hexahydrate across organisms