Experiment set1IT020 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Cobalt chloride hexahydrate 0.05 mM

200 most detrimental genes:

  gene name fitness t score description  
CA264_02025 +1.0 5.1 nitroreductase compare
CA264_20935 +0.9 1.6 transcriptional regulator compare
CA264_01025 +0.9 2.2 hypothetical protein compare
CA264_15745 +0.7 0.9 tRNA-Arg compare
CA264_18945 +0.7 1.0 hypothetical protein compare
CA264_20570 +0.7 1.8 inorganic pyrophosphatase compare
CA264_21460 +0.7 1.4 hypothetical protein compare
CA264_01065 +0.7 3.2 MarR family transcriptional regulator compare
CA264_17100 +0.7 1.9 hypothetical protein compare
CA264_06355 +0.7 5.4 ergothioneine biosynthesis protein EgtB compare
CA264_21225 +0.6 1.0 hypothetical protein compare
CA264_02180 +0.6 1.1 response regulator compare
CA264_18030 +0.6 4.3 cation transporter compare
CA264_10920 +0.6 3.9 helix-turn-helix-type transcriptional regulator compare
CA264_13205 +0.6 2.2 hypothetical protein compare
CA264_14925 +0.6 1.8 hypothetical protein compare
CA264_00500 +0.6 4.8 hypothetical protein compare
CA264_13015 +0.6 4.5 sensor histidine kinase compare
CA264_13825 +0.6 1.3 hypothetical protein compare
CA264_10005 +0.6 1.9 hypothetical protein compare
CA264_09735 +0.6 1.6 5-hydroxyisourate hydrolase compare
CA264_21380 +0.6 2.8 hypothetical protein compare
CA264_21185 +0.5 2.0 hypothetical protein compare
CA264_00405 +0.5 1.4 transcriptional repressor compare
CA264_16400 +0.5 2.4 bifunctional phosphoglucose/phosphomannose isomerase compare
CA264_15650 +0.5 1.9 hypothetical protein compare
CA264_20320 +0.5 2.5 hypothetical protein compare
CA264_02595 +0.5 1.7 oxidoreductase compare
CA264_20925 +0.5 1.0 hypothetical protein compare
CA264_08870 +0.5 3.0 imidazolonepropionase compare
CA264_20455 +0.5 3.6 LLM class flavin-dependent oxidoreductase compare
CA264_05175 +0.5 1.8 hypothetical protein compare
CA264_19925 +0.5 3.6 peptidyl-prolyl cis-trans isomerase compare
CA264_01390 +0.5 2.6 iron ABC transporter permease compare
CA264_16580 +0.5 1.5 aminoacyl-tRNA hydrolase compare
CA264_10045 +0.5 1.5 hypothetical protein compare
CA264_12935 +0.5 1.3 serine hydrolase compare
CA264_10585 +0.5 2.1 hypothetical protein compare
CA264_21475 +0.5 3.6 hypothetical protein compare
CA264_17305 +0.5 2.0 hypothetical protein compare
CA264_21545 +0.5 1.8 AraC family transcriptional regulator compare
CA264_13605 +0.5 2.4 hypothetical protein compare
CA264_07260 +0.5 3.4 hypothetical protein compare
CA264_04700 +0.5 4.1 cyanophycin synthetase compare
CA264_04290 +0.4 2.7 ABC transporter permease compare
CA264_06950 +0.4 2.5 glutathione peroxidase compare
CA264_06610 +0.4 1.8 iron-dependent repressor compare
CA264_00435 +0.4 2.0 energy transducer TonB compare
CA264_06845 +0.4 1.1 hypothetical protein compare
CA264_16570 +0.4 1.8 hypothetical protein compare
CA264_02415 +0.4 1.0 dethiobiotin synthase compare
CA264_19815 +0.4 1.7 hypothetical protein compare
CA264_18135 +0.4 2.4 ABC transporter ATP-binding protein compare
CA264_02450 +0.4 2.2 hypothetical protein compare
CA264_21470 +0.4 2.9 hypothetical protein compare
CA264_04685 +0.4 2.0 HNH endonuclease compare
CA264_20440 +0.4 0.8 thiamine biosynthesis protein ThiS compare
CA264_16440 +0.4 1.4 hypothetical protein compare
CA264_04155 +0.4 1.7 hypothetical protein compare
CA264_00485 +0.4 3.2 peptidase M4 compare
CA264_04475 +0.4 0.9 cold-shock protein compare
CA264_10890 +0.4 2.4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
CA264_01940 +0.4 1.4 antibiotic biosynthesis monooxygenase compare
CA264_14125 +0.4 1.9 endonuclease V compare
CA264_03270 +0.4 1.6 hypothetical protein compare
CA264_03680 +0.4 1.5 hypothetical protein compare
CA264_07245 +0.4 1.9 hypothetical protein compare
CA264_09060 +0.4 1.6 response regulator compare
CA264_16925 +0.4 2.3 SAM-dependent methyltransferase compare
CA264_20355 +0.4 1.7 DUF421 domain-containing protein compare
CA264_11280 +0.4 1.2 SCO family protein compare
CA264_12720 +0.4 1.1 hypothetical protein compare
CA264_12850 +0.4 1.3 hypothetical protein compare
CA264_00505 +0.4 2.3 hypothetical protein compare
CA264_15000 +0.4 0.6 single-stranded DNA-binding protein compare
CA264_03330 +0.4 0.8 peptide-methionine (R)-S-oxide reductase compare
CA264_12180 +0.4 1.8 hypothetical protein compare
CA264_19895 +0.4 1.1 phosphoribosyltransferase compare
CA264_14625 +0.4 0.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
CA264_15710 +0.4 2.3 hypothetical protein compare
CA264_03285 +0.4 0.7 hypothetical protein compare
CA264_12215 +0.4 1.2 cupin compare
CA264_21450 +0.4 2.1 hypothetical protein compare
CA264_18950 +0.4 1.7 hypothetical protein compare
CA264_20285 +0.4 0.7 hypothetical protein compare
CA264_04010 +0.3 1.7 YeeE/YedE family protein compare
CA264_05650 +0.3 1.9 tryptophan 2,3-dioxygenase compare
CA264_05930 +0.3 1.0 glyoxalase compare
CA264_20980 +0.3 1.0 conjugal transfer protein compare
CA264_10875 +0.3 0.9 MerP protein compare
CA264_15425 +0.3 0.8 DUF4834 domain-containing protein compare
CA264_09270 +0.3 1.7 tRNA-specific adenosine deaminase compare
CA264_01545 +0.3 1.2 3-deoxy-7-phosphoheptulonate synthase compare
CA264_21045 +0.3 1.1 hypothetical protein compare
CA264_19785 +0.3 2.9 TonB-dependent receptor compare
CA264_17105 +0.3 1.8 mechanosensitive ion channel protein MscS compare
CA264_14350 +0.3 2.1 hemolysin compare
CA264_16905 +0.3 1.4 hypothetical protein compare
CA264_17530 +0.3 2.0 hemolysin compare
CA264_12240 +0.3 1.6 ABC transporter ATP-binding protein compare
CA264_16015 +0.3 1.4 DNA-binding protein compare
CA264_07920 +0.3 2.0 response regulator compare
CA264_09355 +0.3 1.1 nitroreductase compare
CA264_16490 +0.3 2.2 glucose-1-phosphate thymidylyltransferase compare
CA264_14775 +0.3 1.0 hypothetical protein compare
CA264_18860 +0.3 2.5 TIGR00374 family protein compare
CA264_05440 +0.3 2.1 glucose-fructose oxidoreductase compare
CA264_08945 +0.3 1.6 type 1 glutamine amidotransferase domain-containing protein compare
CA264_19175 +0.3 1.9 hypothetical protein compare
CA264_10160 +0.3 0.9 STAS/SEC14 domain-containing protein compare
CA264_11810 +0.3 1.1 HAD family hydrolase compare
CA264_16150 +0.3 0.5 acyl carrier protein compare
CA264_02485 +0.3 1.6 polyprenyltransferase compare
CA264_01585 +0.3 1.5 hypothetical protein compare
CA264_13540 +0.3 1.6 hypothetical protein compare
CA264_08530 +0.3 1.8 hypothetical protein compare
CA264_16820 +0.3 1.9 hypothetical protein compare
CA264_18220 +0.3 1.5 acylphosphatase compare
CA264_00675 +0.3 1.7 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
CA264_19010 +0.3 2.9 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_04295 +0.3 2.2 hypothetical protein compare
CA264_12600 +0.3 1.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
CA264_12230 +0.3 2.0 hypothetical protein compare
CA264_02170 +0.3 2.2 hypothetical protein compare
CA264_02685 +0.3 1.8 hypothetical protein compare
CA264_12990 +0.3 1.9 ferritin compare
CA264_17750 +0.3 1.0 hypothetical protein compare
CA264_01165 +0.3 1.9 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
CA264_16825 +0.3 1.8 hypothetical protein compare
CA264_13810 +0.3 2.0 hypothetical protein compare
CA264_20485 +0.3 1.5 hypothetical protein compare
CA264_01150 +0.3 1.6 Maebl compare
CA264_03405 +0.3 1.3 hypothetical protein compare
CA264_18195 +0.3 1.6 chaperonin compare
CA264_10975 +0.3 1.4 Pathogenesis-related transcriptional factor and ERF protein compare
CA264_07645 +0.3 1.3 hypothetical protein compare
CA264_17560 +0.3 2.2 hypothetical protein compare
CA264_12770 +0.3 1.4 hypothetical protein compare
CA264_04625 +0.3 1.7 succinyl-CoA--3-ketoacid-CoA transferase compare
CA264_19535 +0.3 2.1 hypothetical protein compare
CA264_19585 +0.3 1.9 hypothetical protein compare
CA264_21215 +0.3 1.9 DNA polymerase V compare
CA264_19215 +0.3 1.3 RNA polymerase subunit sigma compare
CA264_20520 +0.3 0.8 hypothetical protein compare
CA264_12195 +0.3 1.0 DoxX family protein compare
CA264_17445 +0.3 1.9 peptidase M28 compare
CA264_03325 +0.3 0.9 hypothetical protein compare
CA264_17745 +0.3 1.3 TetR family transcriptional regulator compare
CA264_06335 +0.3 0.9 Na+/H+ antiporter subunit G compare
CA264_16055 +0.3 1.3 hypothetical protein compare
CA264_00095 +0.3 1.0 response regulator compare
CA264_01540 +0.3 1.3 hypothetical protein compare
CA264_02700 +0.3 1.4 TIGR02453 family protein compare
CA264_06125 +0.3 1.5 alkyl hydroperoxide reductase compare
CA264_10680 +0.3 0.8 hypothetical protein compare
CA264_16855 +0.3 1.2 hypothetical protein compare
CA264_02635 +0.3 1.0 hypothetical protein compare
CA264_06215 +0.3 1.8 peptidase-C39 like family protein compare
CA264_10905 +0.3 2.3 phytoene synthase compare
CA264_04075 +0.3 1.4 hypothetical protein compare
CA264_00835 +0.3 1.0 hypothetical protein compare
CA264_15870 +0.3 1.7 long-chain fatty acid--CoA ligase compare
CA264_18475 +0.3 0.8 very short patch repair endonuclease compare
CA264_02965 +0.3 1.2 hypothetical protein compare
CA264_08410 +0.3 0.7 CRISPR-associated endonuclease Cas2 compare
CA264_14310 +0.3 1.5 hypothetical protein compare
CA264_13720 +0.3 0.9 hypothetical protein compare
CA264_13460 +0.3 1.1 hypothetical protein compare
CA264_01385 +0.3 1.9 iron ABC transporter substrate-binding protein compare
CA264_03255 +0.3 1.2 hypothetical protein compare
CA264_07380 +0.3 1.6 NADP-dependent oxidoreductase compare
CA264_10950 +0.3 1.4 phenylacetate-CoA oxygenase subunit PaaI compare
CA264_05500 +0.3 0.6 hypothetical protein compare
CA264_02405 +0.3 1.9 beta-ketoacyl-ACP reductase compare
CA264_14675 +0.3 1.2 hypothetical protein compare
CA264_09915 +0.3 1.0 hypothetical protein compare
CA264_14930 +0.3 0.9 hypothetical protein compare
CA264_15645 +0.3 1.9 ornithine--oxo-acid transaminase compare
CA264_04160 +0.3 1.4 hypothetical protein compare
CA264_05170 +0.3 1.4 phosphohydrolase compare
CA264_04260 +0.2 1.9 NADH-quinone oxidoreductase subunit C/D compare
CA264_10895 +0.2 1.5 hypothetical protein compare
CA264_12250 +0.2 1.4 hypothetical protein compare
CA264_01145 +0.2 1.5 dienelactone hydrolase compare
CA264_20800 +0.2 0.9 hypothetical protein compare
CA264_10515 +0.2 1.1 anion permease compare
CA264_04300 +0.2 1.5 ABC transporter substrate-binding protein compare
CA264_15600 +0.2 1.3 tRNA glutamyl-Q synthetase compare
CA264_13765 +0.2 1.6 DNA-binding transcriptional regulator OxyR compare
CA264_02030 +0.2 1.4 hypothetical protein compare
CA264_02590 +0.2 1.0 ribosomal subunit interface protein compare
CA264_20275 +0.2 1.1 DNA-binding protein compare
CA264_13535 +0.2 1.6 AraC family transcriptional regulator compare
CA264_12790 +0.2 1.2 hypothetical protein compare
CA264_14855 +0.2 1.7 hypothetical protein compare
CA264_11970 +0.2 0.7 hypothetical protein compare
CA264_02345 +0.2 1.1 restriction endonuclease compare
CA264_21375 +0.2 1.6 hypothetical protein compare
CA264_08780 +0.2 1.7 hypothetical protein compare
CA264_03145 +0.2 1.8 cellulose synthase compare


Specific Phenotypes

None in this experiment

For Pontibacter actiniarum KMM 6156, DSM 19842 in stress experiments

For stress Cobalt chloride hexahydrate across organisms