Experiment set1IT018 for Pseudomonas simiae WCS417

LB with MreB Perturbing Compound A22 0.16 mg/ml

Group: stress
Media: LB + MreB Perturbing Compound A22 (0.16 mg/ml)
Culturing: fluoroDangl_ML3, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 2/19/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1143 C1,C2

Specific Phenotypes

For 1 genes in this experiment

For stress MreB Perturbing Compound A22 in Pseudomonas simiae WCS417

For stress MreB Perturbing Compound A22 across organisms

SEED Subsystems

Subsystem	#Specific
Carboxysome	1
Respiratory dehydrogenases 1	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Oxidative phosphorylation

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
NADH to cytochrome bo oxidase electron transfer I	2	2	1
NADH to cytochrome bo oxidase electron transfer II	2	2	1
NADH to nitrate electron transfer	2	2	1
nitrate reduction VIIIb (dissimilatory)	2	1	1
NADH to cytochrome bd oxidase electron transfer I	2	1	1
NADH to cytochrome bd oxidase electron transfer II	2	1	1
NADH to cytochrome aa3 oxidase electron transfer	2	1	1
aerobic respiration III (alternative oxidase pathway)	3	3	1
aerobic respiration I (cytochrome c)	4	3	1
aerobic respiration II (cytochrome c) (yeast)	4	3	1
mitochondrial NADPH production (yeast)	5	4	1
Fe(II) oxidation	6	3	1
NAD(P)/NADPH interconversion	6	3	1
superpathway of NAD/NADP - NADH/NADPH interconversion (yeast)	8	7	1