Experiment set1IT013 for Pseudomonas simiae WCS417

Compare to:

LB with Benzalkonium Chloride 0.012 mg/ml

200 most important genes:

  gene name fitness t score description  
PS417_04385 -6.5 -7.7 organic solvent ABC transporter substrate-binding protein compare
PS417_07710 -5.0 -10.4 membrane protein compare
PS417_04380 -5.0 -3.6 ABC transporter permease compare
PS417_04390 -4.8 -6.6 toluene tolerance protein compare
PS417_06775 -4.7 -7.6 antibiotic transporter compare
PS417_06770 -4.5 -8.6 multidrug transporter compare
PS417_14065 -4.5 -15.6 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_13800 -4.5 -6.4 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_24835 -4.3 -4.7 hypothetical protein compare
PS417_21390 -4.3 -7.7 hypothetical protein compare
PS417_02270 -4.3 -6.9 carbamoyltransferase compare
PS417_27245 -4.0 -4.4 aminotransferase DegT compare
PS417_13820 -3.8 -10.7 UDP-glucose 6-dehydrogenase compare
PS417_20650 -3.7 -12.6 hypothetical protein compare
PS417_04375 -3.6 -5.0 ABC transporter ATP-binding protein compare
PS417_23770 -3.6 -4.4 exodeoxyribonuclease V subunit alpha compare
PS417_08220 -3.5 -1.9 epimerase compare
PS417_21595 -3.5 -6.8 flagellar biosynthesis protein FlgN compare
PS417_06375 -3.4 -2.2 deoxycytidine triphosphate deaminase compare
PS417_24155 -3.4 -4.6 ATP-binding protein compare
PS417_13795 -3.4 -10.0 UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
PS417_19840 -3.2 -11.1 flagellar cap protein FliD compare
PS417_19865 -3.2 -9.8 flagellar hook protein FlgK compare
PS417_13790 -3.1 -7.2 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
PS417_19850 -3.1 -11.5 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_13805 -3.1 -13.9 4-amino-4-deoxy-L-arabinose transferase compare
PS417_24710 -3.1 -9.7 lipoprotein compare
PS417_28070 -3.0 -12.2 phosphate ABC transporter ATP-binding protein compare
PS417_19860 -3.0 -11.7 flagellar hook protein FlgL compare
PS417_20635 -2.9 -2.0 ABC transporter ATP-binding protein compare
PS417_08170 -2.9 -12.2 capsular biosynthesis protein compare
PS417_25645 -2.8 -7.5 peptidase M23 compare
PS417_27870 -2.8 -7.1 ATP-dependent DNA helicase RecG compare
PS417_21555 -2.8 -10.0 flagellar hook protein FlgE compare
PS417_02485 -2.6 -7.4 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_21560 -2.6 -7.3 flagellar basal body rod modification protein FlgD compare
PS417_28080 -2.4 -15.3 phosphate ABC transporter permease compare
PS417_25650 -2.4 -6.4 anhydro-N-acetylmuramic acid kinase compare
PS417_08195 -2.4 -9.3 hypothetical protein compare
PS417_20645 -2.3 -10.4 membrane protein compare
PS417_04275 -2.3 -15.1 hypothetical protein compare
PS417_08205 -2.3 -5.7 acetyltransferase compare
PS417_27800 -2.2 -11.1 exodeoxyribonuclease III compare
PS417_20985 -2.1 -5.0 porin compare
PS417_08245 -2.1 -1.8 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_08225 -2.1 -5.2 acetolactate synthase compare
PS417_00525 -2.0 -12.4 hypothetical protein conserved
PS417_08410 -2.0 -3.1 hypothetical protein compare
PS417_20610 -2.0 -1.6 hypothetical protein compare
PS417_04545 -2.0 -13.6 hypothetical protein conserved
PS417_28085 -1.9 -10.7 phosphate-binding protein compare
PS417_02280 -1.9 -2.5 GlcNAc-PI de-N-acetylase compare
PS417_06245 -1.9 -3.4 zinc metallopeptidase RseP compare
PS417_22815 -1.8 -8.3 permease compare
PS417_04365 -1.8 -2.2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_08200 -1.7 -3.2 hypothetical protein compare
PS417_08125 -1.7 -1.7 prephenate dehydratase compare
PS417_08185 -1.6 -6.3 glycosyl transferase compare
PS417_27300 -1.6 -1.9 cell division protein ZapA compare
PS417_02555 -1.6 -11.3 exoribonuclease R compare
PS417_27875 -1.6 -10.7 histidine kinase compare
PS417_08230 -1.5 -3.1 lipopolysaccharide biosynthesis protein RfbH compare
PS417_21515 -1.5 -9.4 transcriptional regulator compare
PS417_22575 -1.5 -8.4 exonuclease I compare
PS417_06530 -1.5 -4.3 membrane protein compare
PS417_22520 -1.4 -3.9 histidine kinase compare
PS417_19835 -1.4 -2.4 flagellar biosynthesis protein FliS compare
PS417_28075 -1.4 -3.7 phosphate ABC transporter permease compare
PS417_21430 -1.3 -4.6 3-oxoacyl-ACP synthase compare
PS417_17780 -1.3 -1.6 Ais protein compare
PS417_08180 -1.3 -8.1 glycosyl transferase compare
PS417_08165 -1.2 -7.4 UDP-glucose 4-epimerase compare
PS417_07140 -1.2 -3.7 peptidase M48 compare
PS417_07620 -1.2 -2.4 beta-hexosaminidase compare
PS417_27795 -1.2 -1.5 orotate phosphoribosyltransferase compare
PS417_01605 -1.2 -1.7 phosphoglycerate mutase compare
PS417_17610 -1.1 -2.3 AsnC family transcriptional regulator compare
PS417_28515 -1.1 -3.3 16S rRNA methyltransferase compare
PS417_02475 -1.1 -2.5 N-acetylmuramoyl-L-alanine amidase compare
PS417_22565 -1.1 -1.9 formyltetrahydrofolate deformylase compare
PS417_26730 -1.1 -1.6 pyrroline-5-carboxylate reductase compare
PS417_08190 -1.1 -7.7 membrane protein compare
PS417_25790 -1.1 -2.6 aminoglycoside phosphotransferase compare
PS417_20665 -1.1 -3.6 hypothetical protein compare
PS417_20080 -1.1 -3.1 peptidase P60 compare
PS417_22450 -1.1 -1.8 ATP-dependent DNA helicase RuvA compare
PS417_02255 -1.1 -3.1 lipopolysaccharide kinase compare
PS417_21125 -1.0 -4.4 phosphoadenosine phosphosulfate reductase compare
PS417_02340 -1.0 -2.6 LysR family transcriptional regulator compare
PS417_18310 -1.0 -1.8 hypothetical protein compare
PS417_24375 -1.0 -4.9 hypothetical protein compare
PS417_26515 -1.0 -4.9 hypothetical protein compare
PS417_18545 -1.0 -4.3 cell division protein compare
PS417_15095 -1.0 -2.5 hypothetical protein compare
PS417_24085 -1.0 -2.5 protein RnfH compare
PS417_08380 -1.0 -3.4 ABC transporter ATP-binding protein compare
PS417_08160 -1.0 -4.3 hypothetical protein compare
PS417_23775 -1.0 -0.9 exodeoxyribonuclease V subunit beta compare
PS417_27865 -0.9 -2.6 LysR family transcriptional regulator compare
PS417_21630 -0.9 -2.1 magnesium transporter compare
PS417_22795 -0.9 -2.5 exclusion suppressor FxsA compare
PS417_23025 -0.9 -5.5 murein transglycosylase compare
PS417_12595 -0.9 -2.0 transcriptional regulator compare
PS417_08250 -0.9 -1.9 competence protein ComEA compare
PS417_04650 -0.9 -0.6 D-alanine--D-alanine ligase compare
PS417_10405 -0.9 -1.1 filamentous hemagglutinin compare
PS417_22615 -0.9 -3.9 hypothetical protein compare
PS417_20705 -0.9 -4.7 cbb3-type cytochrome c oxidase subunit II compare
PS417_07120 -0.9 -6.0 RNA polymerase sigma-H factor compare
PS417_17035 -0.9 -1.4 Cro/Cl family transcriptional regulator compare
PS417_24745 -0.9 -2.1 gamma-glutamyl phosphate reductase compare
PS417_28015 -0.9 -4.2 rubredoxin compare
PS417_23370 -0.9 -2.8 protoheme IX farnesyltransferase compare
PS417_02335 -0.9 -2.1 multidrug DMT transporter compare
PS417_05320 -0.9 -2.3 fimbria A protein compare
PS417_25120 -0.9 -3.9 capsular biosynthesis protein compare
PS417_13780 -0.8 -3.8 integrase compare
PS417_00915 -0.8 -3.7 aminotransferase compare
PS417_18105 -0.8 -1.6 iron-dicitrate transporter substrate-binding subunit compare
PS417_01915 -0.8 -1.0 ATP-dependent protease ATP-binding subunit HslU compare
PS417_07565 -0.8 -2.0 hypothetical protein compare
PS417_00385 -0.8 -1.1 Fur family transcriptional regulator compare
PS417_22570 -0.8 -0.9 H-NS histone compare
PS417_04960 -0.8 -1.5 hypothetical protein compare
PS417_08135 -0.8 -3.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_02880 -0.8 -2.7 copper chaperone compare
PS417_26850 -0.8 -1.0 twin-arginine translocation pathway signal protein compare
PS417_27075 -0.8 -3.6 thiol-disulfide isomerase compare
PS417_24625 -0.8 -2.8 (dimethylallyl)adenosine tRNA methylthiotransferase compare
PS417_28225 -0.8 -1.6 hypothetical protein compare
PS417_15110 -0.8 -3.4 protein BatD compare
PS417_00195 -0.8 -1.6 hypothetical protein compare
PS417_13785 -0.8 -2.2 hypothetical protein compare
PS417_12525 -0.8 -2.7 hypothetical protein compare
PS417_07945 -0.7 -1.5 hypothetical protein compare
PS417_19695 -0.7 -4.3 flagellar biosynthesis sigma factor compare
PS417_24705 -0.7 -2.9 D-alanyl-D-alanine carboxypeptidase compare
PS417_04595 -0.7 -2.5 cell division protein MraZ compare
PS417_08090 -0.7 -1.0 3-oxoacyl-ACP reductase compare
PS417_20660 -0.7 -3.9 hypothetical protein compare
PS417_20025 -0.7 -1.3 alpha-ribazole phosphatase compare
PS417_18060 -0.7 -1.8 general secretion pathway protein GspJ compare
PS417_01630 -0.7 -1.8 hypothetical protein compare
PS417_13145 -0.7 -2.0 50S ribosomal protein L21 compare
PS417_19720 -0.7 -1.4 DNA-binding protein compare
PS417_02480 -0.7 -2.0 DNA mismatch repair protein compare
PS417_07875 -0.7 -0.9 hypothetical protein compare
PS417_28450 -0.7 -1.1 XRE family transcriptional regulator compare
PS417_15100 -0.7 -1.9 BatB protein compare
PS417_15105 -0.7 -3.4 membrane protein compare
PS417_23825 -0.7 -3.5 penicillin-binding protein compare
PS417_02175 -0.7 -2.6 transcriptional regulator compare
PS417_20700 -0.7 -4.8 cbb3-type cytochrome c oxidase subunit I compare
PS417_03740 -0.7 -4.2 peptidylprolyl isomerase compare
PS417_20130 -0.7 -4.9 dehydrogenase compare
PS417_20715 -0.7 -1.9 cytochrome Cbb3 compare
PS417_18420 -0.7 -2.7 deoxyribonuclease compare
PS417_14245 -0.7 -1.4 hypothetical protein compare
PS417_20785 -0.7 -4.0 transcriptional regulator compare
PS417_05135 -0.6 -3.5 nucleoid-associated protein compare
PS417_19675 -0.6 -2.2 chemotaxis protein CheY compare
PS417_02435 -0.6 -2.9 flagellar motor protein MotA compare
PS417_22445 -0.6 -3.1 ATP-dependent DNA helicase RuvB compare
PS417_02440 -0.6 -1.9 flagellar motor protein MotB compare
PS417_03275 -0.6 -4.4 mammalian cell entry protein compare
PS417_03625 -0.6 -2.7 lipid A 3-O-deacylase compare
PS417_04590 -0.6 -3.7 methyltransferase compare
PS417_21355 -0.6 -1.2 hypothetical protein compare
PS417_04980 -0.6 -2.5 response regulator receiver protein compare
PS417_08620 -0.6 -0.9 hypothetical protein compare
PS417_10575 -0.6 -1.7 DNA alkylation repair protein compare
PS417_10275 -0.6 -1.2 histidine kinase compare
PS417_23205 -0.6 -1.7 transcriptional regulator compare
PS417_11585 -0.6 -1.5 LuxR family transcriptional regulator compare
PS417_20265 -0.6 -2.8 transcriptional regulator compare
PS417_03270 -0.6 -2.6 paraquat-inducible protein A compare
PS417_00345 -0.6 -2.2 copper-binding protein compare
PS417_07000 -0.6 -1.5 hypothetical protein compare
PS417_06600 -0.6 -0.8 leucine/isoleucine/valine transporter ATP-binding subunit compare
PS417_14540 -0.6 -1.1 cytochrome C oxidase subunit III compare
PS417_27195 -0.6 -1.2 N-acetylglutamate synthase compare
PS417_13770 -0.6 -2.0 major facilitator transporter compare
PS417_03005 -0.6 -4.3 arginine decarboxylase compare
PS417_13510 -0.6 -0.9 polyketide cyclase compare
PS417_03705 -0.6 -4.6 2-alkenal reductase compare
PS417_11680 -0.6 -2.9 MFS transporter compare
PS417_20655 -0.6 -3.6 group 1 glycosyl transferase compare
PS417_20880 -0.6 -0.8 GntR family transcriptional regulator compare
PS417_02870 -0.6 -3.4 TonB-dependent receptor compare
PS417_27005 -0.6 -0.8 membrane protein compare
PS417_02415 -0.6 -1.8 phosphoserine phosphatase compare
PS417_15780 -0.6 -1.4 membrane protein compare
PS417_25100 -0.6 -4.2 hypothetical protein compare
PS417_16510 -0.6 -1.2 Clp protease ClpX compare
PS417_01855 -0.6 -2.2 phosphoribosyl-AMP cyclohydrolase compare
PS417_05515 -0.6 -2.6 hypothetical protein compare
PS417_23755 -0.6 -2.0 membrane protein compare
PS417_06645 -0.6 -3.8 RNA polymerase-associated protein RapA compare
PS417_27935 -0.6 -1.1 type VI secretion protein compare
PS417_17945 -0.6 -0.7 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Benzalkonium Chloride in Pseudomonas simiae WCS417

For stress Benzalkonium Chloride across organisms