Experiment set1IT013 for Bosea sp. OAE506

Compare to:

L-Fucose carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABIE41_RS11115 +1.3 4.3 metallophosphoesterase compare
ABIE41_RS16205 +1.3 5.4 DUF2155 domain-containing protein compare
ABIE41_RS14905 +1.2 1.1 type II toxin-antitoxin system VapC family toxin compare
ABIE41_RS22490 +1.2 1.1 ChbG/HpnK family deacetylase compare
ABIE41_RS03310 +1.1 2.5 penicillin-binding protein activator compare
ABIE41_RS03055 +1.1 7.2 phytanoyl-CoA dioxygenase family protein compare
ABIE41_RS05410 +1.0 0.9 flagellar motor switch protein FliN compare
ABIE41_RS18490 +1.0 2.2 type II toxin-antitoxin system PemK/MazF family toxin compare
ABIE41_RS05415 +0.9 1.4 hypothetical protein compare
ABIE41_RS13295 +0.9 1.2 flagellar assembly protein FliX compare
ABIE41_RS10400 +0.9 1.4 ABC transporter ATP-binding protein compare
ABIE41_RS12035 +0.9 1.1 HlyU family transcriptional regulator compare
ABIE41_RS00540 +0.9 1.5 hypothetical protein compare
ABIE41_RS16300 +0.9 5.0 IclR family transcriptional regulator C-terminal domain-containing protein compare
ABIE41_RS02950 +0.9 7.1 methyltransferase domain-containing protein compare
ABIE41_RS06435 +0.9 2.9 NAD(P)-dependent oxidoreductase compare
ABIE41_RS00915 +0.9 1.7 hypothetical protein compare
ABIE41_RS02970 +0.9 6.2 glycosyltransferase family 2 protein compare
ABIE41_RS03045 +0.9 7.1 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
ABIE41_RS13035 +0.9 2.1 M20 family metallopeptidase compare
ABIE41_RS00825 +0.9 1.5 hypothetical protein compare
ABIE41_RS03040 +0.9 6.6 WbqC family protein compare
ABIE41_RS08030 +0.9 1.1 glutaredoxin 3 compare
ABIE41_RS20865 +0.8 1.7 hypothetical protein compare
ABIE41_RS22625 +0.8 1.3 DUF1150 domain-containing protein compare
ABIE41_RS01295 +0.8 1.2 Crp/Fnr family transcriptional regulator compare
ABIE41_RS04305 +0.8 1.0 tRNA-Gly compare
ABIE41_RS02920 +0.8 3.1 NAD-dependent epimerase/dehydratase family protein compare
ABIE41_RS04145 +0.8 2.2 methyl-accepting chemotaxis protein compare
ABIE41_RS09045 +0.8 3.0 patatin-like phospholipase family protein compare
ABIE41_RS22970 +0.8 3.4 cytochrome c oxidase subunit 3 compare
ABIE41_RS02000 +0.8 1.6 hypothetical protein compare
ABIE41_RS21875 +0.8 0.8 carboxymuconolactone decarboxylase family protein compare
ABIE41_RS02975 +0.8 6.2 hypothetical protein compare
ABIE41_RS08390 +0.8 1.9 hypothetical protein compare
ABIE41_RS19375 +0.8 2.5 N-acetylmuramidase domain-containing protein compare
ABIE41_RS10910 +0.8 1.9 hypothetical protein compare
ABIE41_RS21150 +0.8 2.6 DMT family transporter compare
ABIE41_RS14510 +0.7 1.8 LysR family transcriptional regulator compare
ABIE41_RS15130 +0.7 1.3 flagellar motor protein MotB compare
ABIE41_RS04610 +0.7 1.3 helix-turn-helix domain-containing protein compare
ABIE41_RS20440 +0.7 1.6 LysR family transcriptional regulator compare
ABIE41_RS02940 +0.7 6.3 hypothetical protein compare
ABIE41_RS16955 +0.7 2.1 PhzF family phenazine biosynthesis protein compare
ABIE41_RS16065 +0.7 0.8 ETC complex I subunit compare
ABIE41_RS19405 +0.7 2.5 phage baseplate assembly protein compare
ABIE41_RS19555 +0.7 2.4 LexA family transcriptional regulator compare
ABIE41_RS00260 +0.7 2.1 DUF2306 domain-containing protein compare
ABIE41_RS05995 +0.7 1.3 alpha/beta fold hydrolase compare
ABIE41_RS13425 +0.7 2.2 flagellar basal body P-ring formation chaperone FlgA compare
ABIE41_RS01925 +0.7 2.3 hypothetical protein compare
ABIE41_RS16075 +0.7 3.8 DUF192 domain-containing protein compare
ABIE41_RS21860 +0.7 2.0 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE41_RS19385 +0.7 5.3 hypothetical protein compare
ABIE41_RS21630 +0.7 1.4 hypothetical protein compare
ABIE41_RS02910 +0.7 5.2 GDP-mannose 4,6-dehydratase compare
ABIE41_RS14750 +0.7 1.0 DUF3253 domain-containing protein compare
ABIE41_RS03870 +0.7 2.3 DNA repair putative endonuclease MmcB compare
ABIE41_RS15980 +0.7 2.3 disulfide bond formation protein B compare
ABIE41_RS23485 +0.7 2.7 pyridoxal-phosphate dependent enzyme compare
ABIE41_RS03050 +0.7 4.4 class I SAM-dependent methyltransferase compare
ABIE41_RS15885 +0.6 2.5 hypothetical protein compare
ABIE41_RS23005 +0.6 1.6 YqgE/AlgH family protein compare
ABIE41_RS19055 +0.6 0.8 XRE family transcriptional regulator compare
ABIE41_RS20005 +0.6 1.8 DUF4142 domain-containing protein compare
ABIE41_RS03120 +0.6 1.5 hypothetical protein compare
ABIE41_RS19395 +0.6 3.9 baseplate J/gp47 family protein compare
ABIE41_RS09660 +0.6 1.2 hypothetical protein compare
ABIE41_RS19480 +0.6 3.4 hypothetical protein compare
ABIE41_RS11835 +0.6 2.0 DMT family protein compare
ABIE41_RS02935 +0.6 5.3 hypothetical protein compare
ABIE41_RS16260 +0.6 1.4 hypothetical protein compare
ABIE41_RS18580 +0.6 1.0 GntR family transcriptional regulator compare
ABIE41_RS09040 +0.6 2.6 3-hydroxybutyrate dehydrogenase compare
ABIE41_RS12725 +0.6 1.4 type II toxin-antitoxin system HicA family toxin compare
ABIE41_RS22050 +0.6 3.1 L,D-transpeptidase compare
ABIE41_RS10885 +0.6 2.8 FliH/SctL family protein compare
ABIE41_RS07500 +0.6 2.8 ABC transporter ATP-binding protein compare
ABIE41_RS14105 +0.6 1.5 GDSL-type esterase/lipase family protein compare
ABIE41_RS21930 +0.6 1.6 creatininase family protein compare
ABIE41_RS00820 +0.6 2.5 DUF1232 domain-containing protein compare
ABIE41_RS19420 +0.6 2.1 DNA circularization N-terminal domain-containing protein compare
ABIE41_RS02355 +0.6 0.8 Lrp/AsnC family transcriptional regulator compare
ABIE41_RS19560 +0.6 2.3 hypothetical protein compare
ABIE41_RS20485 +0.6 2.9 amidohydrolase family protein compare
ABIE41_RS19410 +0.6 2.0 hypothetical protein compare
ABIE41_RS15660 +0.6 1.0 DUF2497 domain-containing protein compare
ABIE41_RS00840 +0.6 1.9 hypothetical protein compare
ABIE41_RS18640 +0.6 1.1 efflux RND transporter periplasmic adaptor subunit compare
ABIE41_RS14015 +0.6 2.1 HAD hydrolase-like protein compare
ABIE41_RS12825 +0.6 1.3 hypothetical protein compare
ABIE41_RS20240 +0.6 2.3 tripartite tricarboxylate transporter substrate-binding protein compare
ABIE41_RS10080 +0.6 1.0 YeeE/YedE family protein compare
ABIE41_RS22200 +0.6 2.2 Lrp/AsnC family transcriptional regulator compare
ABIE41_RS10290 +0.6 1.3 DUF1295 domain-containing protein compare
ABIE41_RS10665 +0.6 0.9 glucose 1-dehydrogenase compare
ABIE41_RS21335 +0.6 2.6 CmpA/NrtA family ABC transporter substrate-binding protein compare
ABIE41_RS09085 +0.6 2.1 hypothetical protein compare
ABIE41_RS10115 +0.6 1.3 hypothetical protein compare
ABIE41_RS16310 +0.6 1.5 NAD(P)/FAD-dependent oxidoreductase compare
ABIE41_RS02005 +0.6 1.8 hypothetical protein compare
ABIE41_RS12955 +0.6 1.9 HWE histidine kinase domain-containing protein compare
ABIE41_RS11335 +0.6 0.7 VUT family protein compare
ABIE41_RS06800 +0.5 1.8 helix-turn-helix transcriptional regulator compare
ABIE41_RS19440 +0.5 3.1 hypothetical protein compare
ABIE41_RS20300 +0.5 2.5 SDR family NAD(P)-dependent oxidoreductase compare
ABIE41_RS11915 +0.5 2.5 GtrA family protein compare
ABIE41_RS19475 +0.5 0.7 hypothetical protein compare
ABIE41_RS19450 +0.5 3.2 hypothetical protein compare
ABIE41_RS13040 +0.5 3.0 SNF2-related protein compare
ABIE41_RS10815 +0.5 1.2 hypothetical protein compare
ABIE41_RS17740 +0.5 2.3 YicC/YloC family endoribonuclease compare
ABIE41_RS06440 +0.5 3.5 LacI family DNA-binding transcriptional regulator compare
ABIE41_RS07685 +0.5 1.8 phosphonate C-P lyase system protein PhnH compare
ABIE41_RS08115 +0.5 1.8 dihydroorotase compare
ABIE41_RS04885 +0.5 0.9 hypothetical protein compare
ABIE41_RS15735 +0.5 1.2 SurA N-terminal domain-containing protein compare
ABIE41_RS21545 +0.5 0.8 trypsin-like serine protease compare
ABIE41_RS02980 +0.5 3.8 class I SAM-dependent methyltransferase compare
ABIE41_RS20715 +0.5 1.2 branched-chain amino acid ABC transporter permease compare
ABIE41_RS03315 +0.5 2.2 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
ABIE41_RS17455 +0.5 1.3 hypothetical protein compare
ABIE41_RS11075 +0.5 0.7 FkbM family methyltransferase compare
ABIE41_RS18680 +0.5 1.5 GntR family transcriptional regulator compare
ABIE41_RS05720 +0.5 0.7 TetR/AcrR family transcriptional regulator compare
ABIE41_RS15455 +0.5 1.1 SDR family oxidoreductase compare
ABIE41_RS04460 +0.5 2.5 murein biosynthesis integral membrane protein MurJ compare
ABIE41_RS06360 +0.5 3.0 GNAT family N-acetyltransferase compare
ABIE41_RS19390 +0.5 2.2 hypothetical protein compare
ABIE41_RS16655 +0.5 2.5 ferric reductase-like transmembrane domain-containing protein compare
ABIE41_RS13070 +0.5 0.7 hypothetical protein compare
ABIE41_RS16660 +0.5 1.4 inositol monophosphatase compare
ABIE41_RS21720 +0.5 1.4 alpha/beta fold hydrolase compare
ABIE41_RS20810 +0.5 1.1 globin-coupled sensor protein compare
ABIE41_RS15715 +0.5 0.9 CidA/LrgA family protein compare
ABIE41_RS22645 +0.5 1.5 phasin compare
ABIE41_RS03015 +0.5 2.0 class I SAM-dependent methyltransferase compare
ABIE41_RS19430 +0.5 1.5 hypothetical protein compare
ABIE41_RS13240 +0.5 2.5 flagellar hook-basal body complex protein compare
ABIE41_RS03785 +0.5 1.6 hypothetical protein compare
ABIE41_RS09335 +0.5 2.2 DUF1465 family protein compare
ABIE41_RS23695 +0.5 2.3 ABC transporter substrate-binding protein compare
ABIE41_RS01605 +0.5 1.7 TetR/AcrR family transcriptional regulator compare
ABIE41_RS15430 +0.5 0.7 mechanosensitive ion channel domain-containing protein compare
ABIE41_RS08895 +0.5 2.1 phosphate ABC transporter permease PstA compare
ABIE41_RS02620 +0.5 3.7 peptide ABC transporter substrate-binding protein compare
ABIE41_RS14380 +0.5 0.8 GPW/gp25 family protein compare
ABIE41_RS14840 +0.5 1.5 SDR family oxidoreductase compare
ABIE41_RS10825 +0.5 2.7 DUF6074 family protein compare
ABIE41_RS09760 +0.5 1.8 transporter substrate-binding domain-containing protein compare
ABIE41_RS13660 +0.5 0.7 flavin reductase family protein compare
ABIE41_RS15670 +0.5 0.8 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE41_RS18415 +0.5 1.5 DUF1028 domain-containing protein compare
ABIE41_RS00090 +0.5 1.8 DUF1993 domain-containing protein compare
ABIE41_RS06410 +0.5 0.8 FCD domain-containing protein compare
ABIE41_RS17845 +0.5 1.3 peptidylprolyl isomerase compare
ABIE41_RS10235 +0.5 0.6 pyridoxamine 5'-phosphate oxidase compare
ABIE41_RS18385 +0.5 1.8 polysaccharide deacetylase compare
ABIE41_RS19260 +0.5 2.3 alpha/beta hydrolase compare
ABIE41_RS08920 +0.5 1.7 hypothetical protein compare
ABIE41_RS04860 +0.4 0.5 SDR family NAD(P)-dependent oxidoreductase compare
ABIE41_RS11920 +0.4 1.3 aspartate/glutamate racemase family protein compare
ABIE41_RS22880 +0.4 1.1 AAA family ATPase compare
ABIE41_RS06340 +0.4 1.3 LysR family transcriptional regulator compare
ABIE41_RS14680 +0.4 1.8 tripartite tricarboxylate transporter substrate-binding protein compare
ABIE41_RS02410 +0.4 3.1 YHS domain-containing (seleno)protein compare
ABIE41_RS20840 +0.4 1.6 hypothetical protein compare
ABIE41_RS14165 +0.4 1.4 hypothetical protein compare
ABIE41_RS20685 +0.4 1.4 NAD(P)-dependent oxidoreductase compare
ABIE41_RS20900 +0.4 2.5 DUF2865 domain-containing protein compare
ABIE41_RS04825 +0.4 2.6 RNA 2',3'-cyclic phosphodiesterase compare
ABIE41_RS15915 +0.4 1.5 nucleoside triphosphate pyrophosphohydrolase compare
ABIE41_RS09055 +0.4 0.6 type II toxin-antitoxin system ParD family antitoxin compare
ABIE41_RS01655 +0.4 2.2 MucR family transcriptional regulator compare
ABIE41_RS14475 +0.4 1.5 cytochrome b/b6 domain-containing protein compare
ABIE41_RS13695 +0.4 1.2 methyl-accepting chemotaxis protein compare
ABIE41_RS09865 +0.4 1.2 hydratase compare
ABIE41_RS19515 +0.4 1.1 hypothetical protein compare
ABIE41_RS10935 +0.4 0.9 hypothetical protein compare
ABIE41_RS05165 +0.4 2.0 hypothetical protein compare
ABIE41_RS15860 +0.4 1.2 tRNA-Thr compare
ABIE41_RS22215 +0.4 1.9 MFS transporter compare
ABIE41_RS13430 +0.4 1.0 flagellar basal body L-ring protein FlgH compare
ABIE41_RS10585 +0.4 1.2 ABC transporter permease compare
ABIE41_RS14100 +0.4 2.7 OpgC domain-containing protein compare
ABIE41_RS04430 +0.4 1.7 ATP-dependent protease subunit HslV compare
ABIE41_RS04870 +0.4 2.2 NADPH:quinone oxidoreductase family protein compare
ABIE41_RS22030 +0.4 2.1 amidase compare
ABIE41_RS22805 +0.4 1.1 substrate-binding domain-containing protein compare
ABIE41_RS04720 +0.4 2.4 YggS family pyridoxal phosphate-dependent enzyme compare
ABIE41_RS04380 +0.4 1.9 glycosyltransferase family 4 protein compare
ABIE41_RS05200 +0.4 0.7 ATP-binding cassette domain-containing protein compare
ABIE41_RS17525 +0.4 1.3 tripartite tricarboxylate transporter substrate binding protein compare
ABIE41_RS19425 +0.4 2.6 Rha family transcriptional regulator compare
ABIE41_RS11460 +0.4 0.8 type II toxin-antitoxin system ParD family antitoxin compare
ABIE41_RS07980 +0.4 2.7 serine hydrolase compare
ABIE41_RS09080 +0.4 2.7 hypothetical protein compare
ABIE41_RS15930 +0.4 1.7 tripartite tricarboxylate transporter substrate binding protein compare
ABIE41_RS08120 +0.4 1.6 amidohydrolase family protein compare
ABIE41_RS15060 +0.4 1.2 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO compare


Specific Phenotypes

None in this experiment

For Bosea sp. OAE506 in carbon source experiments

For carbon source L-Fucose across organisms