Experiment set1IT010 for Rhizobium sp. OAE497

Compare to:

D-Galactose carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS00245 -7.1 -4.9 prephenate dehydratase compare
ABIE40_RS19355 -7.1 -4.9 thioredoxin compare
ABIE40_RS18380 -7.0 -4.8 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS11950 -6.8 -4.7 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS18590 -6.7 -10.2 homoserine O-succinyltransferase compare
ABIE40_RS02340 -6.5 -10.0 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS19050 -6.5 -8.9 3-isopropylmalate dehydrogenase compare
ABIE40_RS19040 -6.4 -4.4 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS17525 -6.3 -3.6 lipoprotein compare
ABIE40_RS18775 -6.1 -10.2 pyruvate carboxylase compare
ABIE40_RS13330 -6.0 -11.6 2-isopropylmalate synthase compare
ABIE40_RS09095 -6.0 -4.1 PAS domain-containing sensor histidine kinase compare
ABIE40_RS06555 -5.8 -3.4 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS09545 -5.7 -3.8 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.5 -3.8 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.5 -3.8 histidinol-phosphatase compare
ABIE40_RS03665 -5.4 -3.7 ATP phosphoribosyltransferase compare
ABIE40_RS02725 -5.4 -3.7 histidinol dehydrogenase compare
ABIE40_RS01970 -5.4 -3.7 acetylglutamate kinase compare
ABIE40_RS10725 -5.4 -3.7 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS08635 -5.3 -8.9 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS09150 -5.3 -19.1 nitrite/sulfite reductase compare
ABIE40_RS02325 -5.3 -3.7 ornithine carbamoyltransferase compare
ABIE40_RS03660 -5.3 -3.6 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS19435 -5.3 -3.0 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS20460 -5.2 -3.6 precorrin-3B synthase compare
ABIE40_RS10720 -5.1 -3.4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19460 -5.1 -3.5 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS11175 -5.0 -3.5 cobyric acid synthase compare
ABIE40_RS09725 -5.0 -3.4 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS16655 -4.9 -6.7 creatininase family protein compare
ABIE40_RS10180 -4.9 -3.4 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS06560 -4.9 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS19330 -4.9 -3.4 phosphoribosylanthranilate isomerase compare
ABIE40_RS13410 -4.8 -3.3 anthranilate synthase compare
ABIE40_RS06930 -4.8 -4.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS11165 -4.8 -3.2 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS09360 -4.8 -3.3 excinuclease ABC subunit UvrA compare
ABIE40_RS16070 -4.7 -3.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS17650 -4.7 -3.3 cobaltochelatase subunit CobS compare
ABIE40_RS11150 -4.7 -9.5 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS06730 -4.7 -6.4 riboflavin synthase compare
ABIE40_RS18925 -4.7 -5.5 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS02320 -4.7 -3.2 aspartate aminotransferase family protein compare
ABIE40_RS19440 -4.7 -4.5 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS01930 -4.6 -2.6 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS09090 -4.6 -7.7 nitrogen regulation protein NR(I) compare
ABIE40_RS11095 -4.6 -3.2 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS20440 -4.6 -3.2 cobalt-precorrin-6A reductase compare
ABIE40_RS19450 -4.5 -3.1 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS14980 -4.5 -3.1 glycoside hydrolase family 16 protein compare
ABIE40_RS20435 -4.5 -3.1 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS17595 -4.5 -3.1 histidinol-phosphate transaminase compare
ABIE40_RS11495 -4.5 -5.3 acetolactate synthase 3 large subunit compare
ABIE40_RS11105 -4.5 -6.8 cobyrinate a,c-diamide synthase compare
ABIE40_RS15345 -4.3 -10.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS19130 -4.3 -3.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS06270 -4.3 -8.7 amidophosphoribosyltransferase compare
ABIE40_RS11155 -4.2 -6.5 cobaltochelatase subunit CobN compare
ABIE40_RS20450 -4.2 -4.1 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS20455 -4.2 -2.4 precorrin-8X methylmutase compare
ABIE40_RS18920 -4.2 -5.3 glutamate 5-kinase compare
ABIE40_RS12925 -4.2 -13.7 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS08005 -4.2 -2.8 dihydroxy-acid dehydratase compare
ABIE40_RS14985 -4.1 -2.7 glycosyltransferase compare
ABIE40_RS20430 -4.1 -2.9 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS12135 -4.1 -2.8 methionine synthase compare
ABIE40_RS03405 -4.1 -2.8 anti-sigma factor compare
ABIE40_RS19445 -4.1 -2.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS14990 -3.9 -13.1 glycosyltransferase family 2 protein compare
ABIE40_RS19480 -3.9 -2.7 DUF1402 family protein compare
ABIE40_RS14955 -3.8 -13.5 sugar transferase compare
ABIE40_RS06050 -3.8 -7.2 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS05430 -3.8 -2.6 phosphoribosylamine--glycine ligase compare
ABIE40_RS09140 -3.7 -8.9 siroheme synthase CysG compare
ABIE40_RS01135 -3.7 -1.3 50S ribosomal protein L20 compare
ABIE40_RS20465 -3.7 -3.6 precorrin-6A synthase (deacetylating) compare
ABIE40_RS09155 -3.7 -5.6 DUF934 domain-containing protein compare
ABIE40_RS03190 -3.7 -6.5 phosphogluconate dehydratase compare
ABIE40_RS17645 -3.7 -4.3 cobaltochelatase subunit CobT compare
ABIE40_RS05155 -3.6 -6.4 DUF5330 domain-containing protein compare
ABIE40_RS17590 -3.6 -2.5 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS10155 -3.6 -2.3 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS08645 -3.6 -7.8 LL-diaminopimelate aminotransferase compare
ABIE40_RS10200 -3.4 -2.3 Grx4 family monothiol glutaredoxin compare
ABIE40_RS09660 -3.3 -14.2 AI-2E family transporter compare
ABIE40_RS00580 -3.3 -3.7 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS00930 -3.3 -8.3 ABC transporter permease compare
ABIE40_RS18685 -3.2 -5.2 beta-ketoacyl-ACP reductase compare
ABIE40_RS20445 -3.2 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS06725 -3.2 -5.6 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS18880 -3.0 -13.1 UDP-glucose 4-epimerase GalE compare
ABIE40_RS00725 -3.0 -5.6 DNA cytosine methyltransferase compare
ABIE40_RS00935 -2.9 -7.2 ABC transporter substrate-binding protein compare
ABIE40_RS01765 -2.9 -7.1 [protein-PII] uridylyltransferase compare
ABIE40_RS01730 -2.7 -2.2 NifU family protein compare
ABIE40_RS09540 -2.7 -6.0 peptidylprolyl isomerase compare
ABIE40_RS02090 -2.7 -5.7 ATP-binding cassette domain-containing protein compare
ABIE40_RS02085 -2.6 -13.4 ABC transporter permease compare
ABIE40_RS22300 -2.6 -5.6 superoxide dismutase compare
ABIE40_RS02080 -2.5 -5.3 sugar ABC transporter substrate-binding protein compare
ABIE40_RS04475 -2.5 -11.9 phosphoadenylyl-sulfate reductase compare
ABIE40_RS07740 -2.5 -2.6 elongation factor Tu compare
ABIE40_RS09720 -2.5 -4.8 GTP cyclohydrolase I FolE compare
ABIE40_RS18640 -2.5 -10.8 M48 family metalloprotease compare
ABIE40_RS19615 -2.4 -2.3 DUF1109 domain-containing protein compare
ABIE40_RS10390 -2.4 -2.4 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS08140 -2.4 -12.6 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS19360 -2.3 -4.6 double-strand break repair helicase AddA compare
ABIE40_RS30285 -2.3 -1.1 co-chaperone GroES compare
ABIE40_RS19455 -2.2 -1.5 DUF2628 domain-containing protein compare
ABIE40_RS19700 -2.2 -3.6 MBL fold metallo-hydrolase compare
ABIE40_RS19365 -2.2 -3.2 double-strand break repair protein AddB compare
ABIE40_RS04470 -2.2 -12.9 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS04465 -2.1 -11.4 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS15920 -2.1 -1.0 50S ribosomal protein L31 compare
ABIE40_RS09425 -2.1 -5.1 peptidylprolyl isomerase compare
ABIE40_RS05665 -2.1 -3.8 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS19260 -2.1 -3.3 DNA polymerase III subunit epsilon compare
ABIE40_RS05025 -2.0 -2.6 MucR family transcriptional regulator compare
ABIE40_RS10345 -2.0 -6.1 RNA polymerase-binding protein DksA compare
ABIE40_RS11060 -1.9 -3.7 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS09980 -1.9 -2.5 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS06720 -1.9 -2.0 transcriptional regulator NrdR compare
ABIE40_RS05670 -1.9 -5.1 membrane protein compare
ABIE40_RS19645 -1.9 -9.6 acyltransferase compare
ABIE40_RS13005 -1.9 -7.2 pyrroline-5-carboxylate reductase compare
ABIE40_RS01510 -1.9 -3.4 NmrA family NAD(P)-binding protein compare
ABIE40_RS12360 -1.8 -8.9 DUF5131 family protein compare
ABIE40_RS23000 -1.8 -3.4 TetR/AcrR family transcriptional regulator compare
ABIE40_RS00925 -1.8 -3.4 ABC transporter permease compare
ABIE40_RS09145 -1.8 -3.5 DUF2849 domain-containing protein compare
ABIE40_RS13370 -1.8 -10.0 CDF family cation efflux transporter EmfA compare
ABIE40_RS12845 -1.8 -4.3 glycosyltransferase family 4 protein compare
ABIE40_RS16570 -1.7 -2.3 tetratricopeptide repeat protein compare
ABIE40_RS19245 -1.7 -3.8 Maf-like protein compare
ABIE40_RS19375 -1.7 -4.9 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
ABIE40_RS14940 -1.7 -8.9 acyltransferase compare
ABIE40_RS01055 -1.7 -5.7 translation elongation factor 4 compare
ABIE40_RS15730 -1.6 -3.5 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS18055 -1.6 -2.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS24490 -1.6 -1.4 flavin reductase compare
ABIE40_RS15855 -1.6 -3.3 cell division protein ZapA compare
ABIE40_RS17290 -1.6 -4.5 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS06775 -1.6 -2.6 DUF177 domain-containing protein compare
ABIE40_RS24730 -1.5 -6.4 glycerol-3-phosphate dehydrogenase compare
ABIE40_RS30315 -1.5 -1.3 hypothetical protein compare
ABIE40_RS05625 -1.5 -1.5 phage tail tape measure protein compare
ABIE40_RS00490 -1.5 -7.5 DNA polymerase I compare
ABIE40_RS16490 -1.4 -7.1 glycogen synthase GlgA compare
ABIE40_RS19385 -1.4 -5.4 adenosylhomocysteinase compare
ABIE40_RS28815 -1.4 -5.3 GNAT family N-acetyltransferase compare
ABIE40_RS10140 -1.4 -2.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS07105 -1.4 -2.9 DNA-binding protein HupB compare
ABIE40_RS07200 -1.4 -1.9 NADH-quinone oxidoreductase subunit E compare
ABIE40_RS01705 -1.4 -6.2 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS28120 -1.4 -1.8 MFS transporter compare
ABIE40_RS19100 -1.4 -8.0 lytic transglycosylase domain-containing protein compare
ABIE40_RS16210 -1.3 -6.0 homospermidine synthase compare
ABIE40_RS14855 -1.3 -4.8 NAD-dependent epimerase compare
ABIE40_RS19395 -1.3 -2.9 PTS sugar transporter subunit IIA compare
ABIE40_RS08980 -1.3 -3.2 transcriptional repressor LexA compare
ABIE40_RS05740 -1.3 -2.3 hypothetical protein compare
ABIE40_RS23670 -1.3 -1.2 hypothetical protein compare
ABIE40_RS08970 -1.3 -5.8 citrate synthase compare
ABIE40_RS17585 -1.3 -3.7 DUF2125 domain-containing protein compare
ABIE40_RS30225 -1.2 -3.5 hypothetical protein compare
ABIE40_RS29470 -1.2 -1.9 type 1 glutamine amidotransferase domain-containing protein compare
ABIE40_RS27630 -1.2 -1.7 metalloregulator ArsR/SmtB family transcription factor compare
ABIE40_RS06220 -1.2 -7.8 citramalate synthase compare
ABIE40_RS11085 -1.2 -3.4 acyl carrier protein compare
ABIE40_RS05685 -1.2 -7.5 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS18300 -1.2 -5.9 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS16390 -1.2 -1.0 hypothetical protein compare
ABIE40_RS00340 -1.2 -2.3 30S ribosome-binding factor RbfA compare
ABIE40_RS11875 -1.2 -1.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS17370 -1.2 -1.0 hypothetical protein compare
ABIE40_RS18735 -1.2 -3.6 TetR/AcrR family transcriptional regulator compare
ABIE40_RS08935 -1.1 -2.0 RIP metalloprotease RseP compare
ABIE40_RS28765 -1.1 -0.8 chemotaxis protein CheX compare
ABIE40_RS15010 -1.1 -5.2 metallophosphoesterase compare
ABIE40_RS17010 -1.1 -5.4 sugar ABC transporter permease compare
ABIE40_RS05165 -1.1 -3.0 peptidoglycan-binding protein compare
ABIE40_RS18690 -1.1 -4.0 acetyl-CoA C-acetyltransferase compare
ABIE40_RS20370 -1.1 -1.5 type II toxin-antitoxin system Phd/YefM family antitoxin compare
ABIE40_RS29420 -1.1 -2.1 hypothetical protein compare
ABIE40_RS14455 -1.1 -2.7 NepR family anti-sigma factor compare
ABIE40_RS11065 -1.1 -2.0 zinc-binding dehydrogenase compare
ABIE40_RS19925 -1.1 -1.9 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS20545 -1.1 -1.9 YbaK/EbsC family protein compare
ABIE40_RS27215 -1.1 -0.9 3'-5' exonuclease compare
ABIE40_RS04770 -1.1 -5.2 TetR/AcrR family transcriptional regulator compare
ABIE40_RS06450 -1.1 -5.6 ABC-F family ATP-binding cassette domain-containing protein compare
ABIE40_RS16985 -1.1 -5.5 FGGY-family carbohydrate kinase compare
ABIE40_RS05690 -1.1 -4.3 cytochrome c-type biogenesis protein compare
ABIE40_RS06700 -1.1 -2.4 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS09170 -1.1 -3.0 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS04070 -1.1 -3.5 heme o synthase compare
ABIE40_RS16170 -1.0 -1.9 DUF882 domain-containing protein compare
ABIE40_RS14370 -1.0 -1.6 DUF423 domain-containing protein compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source D-Galactose in Rhizobium sp. OAE497

For carbon source D-Galactose across organisms