Experiment set1IT006 for Rhizobium sp. OAE497

Compare to:

L-Arabinose carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS15855 -6.8 -3.4 cell division protein ZapA compare
ABIE40_RS19050 -6.0 -8.3 3-isopropylmalate dehydrogenase compare
ABIE40_RS19630 -6.0 -5.6 4-carboxymuconolactone decarboxylase compare
ABIE40_RS17525 -5.8 -2.9 lipoprotein compare
ABIE40_RS11950 -5.7 -6.8 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS19635 -5.7 -7.8 protocatechuate 3,4-dioxygenase subunit beta compare
ABIE40_RS19640 -5.6 -8.6 protocatechuate 3,4-dioxygenase subunit alpha compare
ABIE40_RS18380 -5.6 -11.9 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS02340 -5.5 -11.2 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS09095 -5.5 -3.8 PAS domain-containing sensor histidine kinase compare
ABIE40_RS19040 -5.4 -6.5 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS06555 -5.4 -2.7 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS00245 -5.4 -11.5 prephenate dehydratase compare
ABIE40_RS13330 -5.3 -11.8 2-isopropylmalate synthase compare
ABIE40_RS18590 -5.2 -14.8 homoserine O-succinyltransferase compare
ABIE40_RS09545 -5.2 -3.0 anthranilate phosphoribosyltransferase compare
ABIE40_RS24490 -5.1 -1.5 flavin reductase compare
ABIE40_RS17530 -5.1 -3.5 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.1 -3.5 histidinol-phosphatase compare
ABIE40_RS03665 -5.0 -3.5 ATP phosphoribosyltransferase compare
ABIE40_RS20460 -5.0 -3.2 precorrin-3B synthase compare
ABIE40_RS02725 -5.0 -3.4 histidinol dehydrogenase compare
ABIE40_RS01970 -4.9 -3.4 acetylglutamate kinase compare
ABIE40_RS10725 -4.9 -3.4 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS19555 -4.9 -6.7 CoA transferase subunit B compare
ABIE40_RS02325 -4.9 -3.4 ornithine carbamoyltransferase compare
ABIE40_RS19435 -4.8 -2.4 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS08935 -4.8 -3.3 RIP metalloprotease RseP compare
ABIE40_RS19560 -4.8 -13.4 3-oxoacid CoA-transferase subunit A compare
ABIE40_RS19415 -4.7 -12.8 phosphoenolpyruvate carboxykinase compare
ABIE40_RS20450 -4.7 -3.2 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS19625 -4.7 -7.9 3-oxoadipate enol-lactonase compare
ABIE40_RS16655 -4.7 -5.6 creatininase family protein compare
ABIE40_RS15620 -4.7 -4.7 tol-pal system-associated acyl-CoA thioesterase compare
ABIE40_RS10720 -4.7 -2.7 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS14990 -4.6 -10.7 glycosyltransferase family 2 protein compare
ABIE40_RS11150 -4.6 -7.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS06930 -4.5 -3.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS19550 -4.5 -9.7 3-oxoadipyl-CoA thiolase compare
ABIE40_RS20440 -4.4 -2.9 cobalt-precorrin-6A reductase compare
ABIE40_RS17565 -4.4 -2.9 ABC transporter permease compare
ABIE40_RS20435 -4.3 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS19460 -4.3 -5.1 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS11105 -4.3 -5.1 cobyrinate a,c-diamide synthase compare
ABIE40_RS11165 -4.3 -2.5 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS16645 -4.3 -17.1 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS06730 -4.3 -5.9 riboflavin synthase compare
ABIE40_RS16070 -4.3 -3.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS19355 -4.3 -3.4 thioredoxin compare
ABIE40_RS09150 -4.2 -14.5 nitrite/sulfite reductase compare
ABIE40_RS09155 -4.2 -5.2 DUF934 domain-containing protein compare
ABIE40_RS09725 -4.2 -4.1 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS02320 -4.2 -2.9 aspartate aminotransferase family protein compare
ABIE40_RS05660 -4.2 -2.9 response regulator transcription factor compare
ABIE40_RS11495 -4.1 -4.0 acetolactate synthase 3 large subunit compare
ABIE40_RS14980 -4.1 -2.8 glycoside hydrolase family 16 protein compare
ABIE40_RS02345 -4.1 -2.8 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS17595 -4.1 -2.8 histidinol-phosphate transaminase compare
ABIE40_RS17650 -4.1 -3.9 cobaltochelatase subunit CobS compare
ABIE40_RS11175 -4.0 -5.5 cobyric acid synthase compare
ABIE40_RS20455 -4.0 -2.0 precorrin-8X methylmutase compare
ABIE40_RS16170 -4.0 -2.8 DUF882 domain-containing protein compare
ABIE40_RS08980 -4.0 -6.7 transcriptional repressor LexA compare
ABIE40_RS19620 -3.9 -7.5 pca operon transcription factor PcaQ compare
ABIE40_RS11155 -3.9 -3.8 cobaltochelatase subunit CobN compare
ABIE40_RS19330 -3.9 -3.8 phosphoribosylanthranilate isomerase compare
ABIE40_RS11095 -3.9 -3.8 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS19450 -3.9 -3.7 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS20465 -3.8 -2.6 precorrin-6A synthase (deacetylating) compare
ABIE40_RS14985 -3.8 -2.1 glycosyltransferase compare
ABIE40_RS09660 -3.8 -12.4 AI-2E family transporter compare
ABIE40_RS19440 -3.8 -5.1 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS15010 -3.7 -11.7 metallophosphoesterase compare
ABIE40_RS08970 -3.7 -8.6 citrate synthase compare
ABIE40_RS08005 -3.7 -2.5 dihydroxy-acid dehydratase compare
ABIE40_RS00935 -3.7 -3.6 ABC transporter substrate-binding protein compare
ABIE40_RS19130 -3.7 -3.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS03405 -3.7 -2.5 anti-sigma factor compare
ABIE40_RS09360 -3.7 -5.6 excinuclease ABC subunit UvrA compare
ABIE40_RS19245 -3.7 -4.4 Maf-like protein compare
ABIE40_RS13410 -3.7 -6.6 anthranilate synthase compare
ABIE40_RS12135 -3.7 -2.5 methionine synthase compare
ABIE40_RS19445 -3.7 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS00930 -3.6 -6.1 ABC transporter permease compare
ABIE40_RS06560 -3.6 -5.4 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS10180 -3.6 -5.4 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS04770 -3.5 -7.4 TetR/AcrR family transcriptional regulator compare
ABIE40_RS14940 -3.4 -11.1 acyltransferase compare
ABIE40_RS03660 -3.4 -7.3 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS22660 -3.3 -3.9 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
ABIE40_RS09425 -3.3 -5.1 peptidylprolyl isomerase compare
ABIE40_RS09540 -3.3 -9.2 peptidylprolyl isomerase compare
ABIE40_RS19700 -3.3 -2.3 MBL fold metallo-hydrolase compare
ABIE40_RS11810 -3.3 -6.6 D-alanine--D-alanine ligase compare
ABIE40_RS05665 -3.3 -4.8 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS17390 -3.3 -9.1 peptidylprolyl isomerase compare
ABIE40_RS12855 -3.2 -8.2 glycosyltransferase family 2 protein compare
ABIE40_RS19650 -3.2 -2.8 3-carboxy-cis,cis-muconate cycloisomerase compare
ABIE40_RS14855 -3.2 -7.7 NAD-dependent epimerase compare
ABIE40_RS17590 -3.2 -2.2 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS06050 -3.2 -6.7 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS19100 -3.1 -8.1 lytic transglycosylase domain-containing protein compare
ABIE40_RS20445 -3.1 -1.3 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS19455 -3.1 -2.0 DUF2628 domain-containing protein compare
ABIE40_RS11900 -3.0 -8.3 N-acetylmuramoyl-L-alanine amidase compare
ABIE40_RS18925 -3.0 -6.2 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS08865 -3.0 -8.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS19260 -3.0 -2.9 DNA polymerase III subunit epsilon compare
ABIE40_RS05430 -3.0 -2.9 phosphoribosylamine--glycine ligase compare
ABIE40_RS10420 -2.9 -7.7 MCE family protein compare
ABIE40_RS10430 -2.9 -10.3 MlaE family lipid ABC transporter permease subunit compare
ABIE40_RS12360 -2.9 -9.1 DUF5131 family protein compare
ABIE40_RS00580 -2.8 -3.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS05670 -2.8 -5.2 membrane protein compare
ABIE40_RS08140 -2.8 -12.2 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS15650 -2.8 -5.8 TIGR00282 family metallophosphoesterase compare
ABIE40_RS11060 -2.8 -4.4 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS00725 -2.8 -4.9 DNA cytosine methyltransferase compare
ABIE40_RS08485 -2.8 -4.4 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABIE40_RS20430 -2.7 -3.6 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS19645 -2.7 -10.0 acyltransferase compare
ABIE40_RS06725 -2.7 -5.8 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS17645 -2.7 -4.8 cobaltochelatase subunit CobT compare
ABIE40_RS15750 -2.7 -3.3 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
ABIE40_RS02585 -2.6 -9.9 acetyl-CoA C-acetyltransferase compare
ABIE40_RS26150 -2.6 -0.9 hypothetical protein compare
ABIE40_RS11910 -2.6 -6.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
ABIE40_RS09645 -2.6 -9.4 triose-phosphate isomerase compare
ABIE40_RS05155 -2.5 -5.3 DUF5330 domain-containing protein compare
ABIE40_RS07475 -2.5 -1.9 NADH:ubiquinone oxidoreductase subunit NDUFA12 compare
ABIE40_RS05365 -2.5 -6.6 tetratricopeptide repeat protein compare
ABIE40_RS12925 -2.5 -10.9 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS08635 -2.5 -10.6 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS10705 -2.5 -10.8 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS09770 -2.5 -5.0 D-alanyl-D-alanine carboxypeptidase compare
ABIE40_RS14850 -2.5 -9.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS17585 -2.4 -3.7 DUF2125 domain-containing protein compare
ABIE40_RS18920 -2.4 -3.6 glutamate 5-kinase compare
ABIE40_RS03485 -2.4 -9.6 MAPEG family protein compare
ABIE40_RS02590 -2.4 -8.5 FAD-dependent oxidoreductase compare
ABIE40_RS19480 -2.4 -3.6 DUF1402 family protein compare
ABIE40_RS17010 -2.4 -7.5 sugar ABC transporter permease compare
ABIE40_RS13635 -2.4 -11.9 peptide antibiotic transporter SbmA compare
ABIE40_RS15890 -2.4 -6.1 fructose bisphosphate aldolase compare
ABIE40_RS10425 -2.3 -4.0 ABC transporter ATP-binding protein compare
ABIE40_RS00925 -2.3 -4.5 ABC transporter permease compare
ABIE40_RS28815 -2.3 -6.2 GNAT family N-acetyltransferase compare
ABIE40_RS00620 -2.3 -6.6 microcin C ABC transporter permease YejB compare
ABIE40_RS01765 -2.3 -5.6 [protein-PII] uridylyltransferase compare
ABIE40_RS08600 -2.3 -6.2 trigger factor compare
ABIE40_RS18775 -2.2 -12.9 pyruvate carboxylase compare
ABIE40_RS00630 -2.2 -8.4 ABC transporter ATP-binding protein compare
ABIE40_RS02525 -2.2 -10.4 peptidoglycan-binding protein compare
ABIE40_RS02580 -2.2 -12.3 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABIE40_RS09720 -2.2 -3.9 GTP cyclohydrolase I FolE compare
ABIE40_RS18640 -2.2 -7.7 M48 family metalloprotease compare
ABIE40_RS11875 -2.2 -2.0 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS00490 -2.2 -8.8 DNA polymerase I compare
ABIE40_RS28045 -2.2 -1.4 hypothetical protein compare
ABIE40_RS09090 -2.2 -5.8 nitrogen regulation protein NR(I) compare
ABIE40_RS16570 -2.1 -2.0 tetratricopeptide repeat protein compare
ABIE40_RS17575 -2.1 -6.6 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABIE40_RS04820 -2.1 -1.6 TetR family transcriptional regulator compare
ABIE40_RS18975 -2.1 -8.2 S41 family peptidase compare
ABIE40_RS09085 -2.1 -3.7 nitrogen regulation protein NR(II) compare
ABIE40_RS11465 -2.1 -1.7 nitrile hydratase accessory protein compare
ABIE40_RS03815 -2.1 -1.7 DUF6101 family protein compare
ABIE40_RS08425 -2.1 -2.3 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS19030 -2.1 -2.3 hypothetical protein compare
ABIE40_RS18005 -2.1 -9.3 cell division protein ZapE compare
ABIE40_RS00625 -2.1 -7.3 ABC transporter permease compare
ABIE40_RS01325 -2.1 -5.0 hypothetical protein compare
ABIE40_RS09690 -2.0 -5.6 hypothetical protein compare
ABIE40_RS04505 -2.0 -1.3 YlcI/YnfO family protein compare
ABIE40_RS17015 -2.0 -6.4 sugar ABC transporter substrate-binding protein compare
ABIE40_RS18970 -2.0 -2.7 murein hydrolase activator EnvC compare
ABIE40_RS10515 -2.0 -6.3 glutathione-disulfide reductase compare
ABIE40_RS22130 -2.0 -3.7 hypothetical protein compare
ABIE40_RS10345 -2.0 -4.3 RNA polymerase-binding protein DksA compare
ABIE40_RS19365 -1.9 -2.6 double-strand break repair protein AddB compare
ABIE40_RS20055 -1.9 -2.0 sugar phosphate isomerase/epimerase compare
ABIE40_RS17450 -1.9 -6.2 YqaA family protein compare
ABIE40_RS06140 -1.9 -1.6 HD family hydrolase compare
ABIE40_RS17005 -1.9 -5.7 carbohydrate ABC transporter permease compare
ABIE40_RS07480 -1.9 -4.9 DUF2155 domain-containing protein compare
ABIE40_RS19495 -1.9 -8.8 L,D-transpeptidase compare
ABIE40_RS03515 -1.9 -3.2 glutamate--cysteine ligase compare
ABIE40_RS13620 -1.9 -3.7 tetratricopeptide repeat protein compare
ABIE40_RS06270 -1.9 -6.1 amidophosphoribosyltransferase compare
ABIE40_RS19360 -1.9 -3.8 double-strand break repair helicase AddA compare
ABIE40_RS10155 -1.8 -1.7 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS11605 -1.8 -8.2 AsmA-like C-terminal region-containing protein compare
ABIE40_RS06645 -1.8 -1.5 hypothetical protein compare
ABIE40_RS10100 -1.8 -4.8 branched-chain amino acid ABC transporter substrate-binding protein compare
ABIE40_RS01405 -1.8 -5.1 glutathione synthase compare
ABIE40_RS15730 -1.8 -2.1 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS29240 -1.8 -2.1 cold-shock protein compare
ABIE40_RS14455 -1.8 -2.7 NepR family anti-sigma factor compare
ABIE40_RS09320 -1.8 -7.9 extracellular solute-binding protein compare
ABIE40_RS30285 -1.7 -0.9 co-chaperone GroES compare


Specific Phenotypes

For 16 genes in this experiment

For carbon source L-Arabinose in Rhizobium sp. OAE497

For carbon source L-Arabinose across organisms