Experiment set1IT004 for Rhizobium sp. OAE497

Compare to:

D-Fructose carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18590 -6.2 -13.2 homoserine O-succinyltransferase compare
ABIE40_RS18380 -6.1 -13.1 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS02340 -5.9 -12.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS13330 -5.8 -11.8 2-isopropylmalate synthase compare
ABIE40_RS19040 -5.7 -6.8 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS19355 -5.7 -4.9 thioredoxin compare
ABIE40_RS06555 -5.6 -3.0 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS09545 -5.5 -3.4 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.5 -3.8 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.4 -3.7 histidinol-phosphatase compare
ABIE40_RS03665 -5.3 -3.7 ATP phosphoribosyltransferase compare
ABIE40_RS20460 -5.3 -3.6 precorrin-3B synthase compare
ABIE40_RS02725 -5.3 -3.6 histidinol dehydrogenase compare
ABIE40_RS01970 -5.2 -3.6 acetylglutamate kinase compare
ABIE40_RS03660 -5.2 -3.6 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS02325 -5.2 -3.6 ornithine carbamoyltransferase compare
ABIE40_RS10725 -5.2 -3.6 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS19435 -5.1 -2.7 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS18775 -5.1 -20.2 pyruvate carboxylase compare
ABIE40_RS19460 -5.0 -3.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS10720 -4.9 -3.0 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19050 -4.8 -6.9 3-isopropylmalate dehydrogenase compare
ABIE40_RS19440 -4.8 -3.3 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS09725 -4.8 -3.3 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS11950 -4.8 -7.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS20440 -4.7 -3.2 cobalt-precorrin-6A reductase compare
ABIE40_RS06560 -4.7 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS00245 -4.7 -10.4 prephenate dehydratase compare
ABIE40_RS17650 -4.7 -3.2 cobaltochelatase subunit CobS compare
ABIE40_RS20435 -4.6 -3.2 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS11150 -4.6 -8.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS09360 -4.6 -3.1 excinuclease ABC subunit UvrA compare
ABIE40_RS11105 -4.4 -5.3 cobyrinate a,c-diamide synthase compare
ABIE40_RS17595 -4.4 -3.1 histidinol-phosphate transaminase compare
ABIE40_RS10180 -4.4 -4.3 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS13410 -4.4 -5.2 anthranilate synthase compare
ABIE40_RS20455 -4.3 -2.3 precorrin-8X methylmutase compare
ABIE40_RS11155 -4.3 -4.2 cobaltochelatase subunit CobN compare
ABIE40_RS20430 -4.3 -2.9 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS19330 -4.2 -4.1 phosphoribosylanthranilate isomerase compare
ABIE40_RS19130 -4.2 -2.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS19450 -4.2 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS11175 -4.0 -6.7 cobyric acid synthase compare
ABIE40_RS01880 -4.0 -5.4 ribokinase compare
ABIE40_RS03405 -4.0 -2.7 anti-sigma factor compare
ABIE40_RS19445 -3.9 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS20450 -3.9 -4.3 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS17645 -3.9 -2.7 cobaltochelatase subunit CobT compare
ABIE40_RS08005 -3.9 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS06930 -3.9 -6.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS11495 -3.8 -7.7 acetolactate synthase 3 large subunit compare
ABIE40_RS16070 -3.6 -4.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS11095 -3.6 -6.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS24380 -3.6 -12.9 FGGY-family carbohydrate kinase compare
ABIE40_RS05430 -3.6 -2.5 phosphoribosylamine--glycine ligase compare
ABIE40_RS12135 -3.6 -4.2 methionine synthase compare
ABIE40_RS06270 -3.6 -9.4 amidophosphoribosyltransferase compare
ABIE40_RS17590 -3.5 -2.4 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS11165 -3.5 -2.8 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS15920 -3.5 -1.1 50S ribosomal protein L31 compare
ABIE40_RS24760 -3.4 -4.9 DeoR/GlpR family DNA-binding transcription regulator compare
ABIE40_RS10155 -3.4 -2.0 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS09095 -3.3 -4.9 PAS domain-containing sensor histidine kinase compare
ABIE40_RS20445 -3.3 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS01930 -3.3 -1.9 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS08635 -3.3 -12.4 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS18920 -3.2 -5.1 glutamate 5-kinase compare
ABIE40_RS30495 -3.1 -1.4 LuxR C-terminal-related transcriptional regulator compare
ABIE40_RS00580 -3.0 -3.2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS17525 -2.9 -2.4 lipoprotein compare
ABIE40_RS20465 -2.9 -5.1 precorrin-6A synthase (deacetylating) compare
ABIE40_RS09170 -2.8 -5.8 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS14990 -2.7 -11.3 glycosyltransferase family 2 protein compare
ABIE40_RS10345 -2.7 -6.0 RNA polymerase-binding protein DksA compare
ABIE40_RS24375 -2.7 -4.7 SDR family oxidoreductase compare
ABIE40_RS02075 -2.6 -11.0 ROK family transcriptional regulator compare
ABIE40_RS13835 -2.6 -1.6 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase compare
ABIE40_RS09720 -2.5 -4.3 GTP cyclohydrolase I FolE compare
ABIE40_RS09150 -2.5 -13.9 nitrite/sulfite reductase compare
ABIE40_RS14985 -2.4 -2.4 glycosyltransferase compare
ABIE40_RS05690 -2.4 -5.3 cytochrome c-type biogenesis protein compare
ABIE40_RS04080 -2.4 -9.0 cytochrome c oxidase assembly protein compare
ABIE40_RS13130 -2.4 -8.5 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS18300 -2.4 -8.8 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS05685 -2.3 -10.9 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS08970 -2.3 -8.7 citrate synthase compare
ABIE40_RS26670 -2.3 -1.2 hypothetical protein compare
ABIE40_RS10390 -2.3 -2.6 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS06050 -2.3 -4.8 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS00725 -2.3 -4.9 DNA cytosine methyltransferase compare
ABIE40_RS19360 -2.2 -4.8 double-strand break repair helicase AddA compare
ABIE40_RS04085 -2.2 -8.6 cytochrome c oxidase subunit 3 compare
ABIE40_RS08425 -2.2 -2.5 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS16660 -2.2 -3.7 GTP-binding protein compare
ABIE40_RS09140 -2.2 -9.2 siroheme synthase CysG compare
ABIE40_RS02320 -2.2 -5.5 aspartate aminotransferase family protein compare
ABIE40_RS01135 -2.2 -0.9 50S ribosomal protein L20 compare
ABIE40_RS14955 -2.1 -6.7 sugar transferase compare
ABIE40_RS17515 -2.1 -5.9 TlpA disulfide reductase family protein compare
ABIE40_RS18880 -2.1 -9.3 UDP-glucose 4-epimerase GalE compare
ABIE40_RS18290 -2.1 -10.9 heme ABC transporter permease compare
ABIE40_RS23635 -2.1 -1.1 hypothetical protein compare
ABIE40_RS13125 -2.1 -11.0 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS04070 -2.1 -4.5 heme o synthase compare
ABIE40_RS13120 -2.0 -6.9 cytochrome c1 compare
ABIE40_RS09155 -2.0 -3.0 DUF934 domain-containing protein compare
ABIE40_RS12925 -2.0 -8.9 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS19700 -1.9 -3.3 MBL fold metallo-hydrolase compare
ABIE40_RS04065 -1.9 -9.5 cytochrome c oxidase subunit I compare
ABIE40_RS24310 -1.9 -6.2 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS18280 -1.9 -3.9 heme ABC exporter ATP-binding protein CcmA compare
ABIE40_RS04475 -1.8 -8.8 phosphoadenylyl-sulfate reductase compare
ABIE40_RS19365 -1.8 -3.2 double-strand break repair protein AddB compare
ABIE40_RS28600 -1.8 -1.2 FAD-dependent oxidoreductase compare
ABIE40_RS12360 -1.8 -9.6 DUF5131 family protein compare
ABIE40_RS18285 -1.8 -5.2 heme exporter protein CcmB compare
ABIE40_RS30520 -1.8 -1.1 hypothetical protein compare
ABIE40_RS20370 -1.8 -2.1 type II toxin-antitoxin system Phd/YefM family antitoxin compare
ABIE40_RS03190 -1.8 -3.2 phosphogluconate dehydratase compare
ABIE40_RS16655 -1.7 -5.5 creatininase family protein compare
ABIE40_RS05680 -1.7 -4.4 cytochrome c maturation protein CcmE compare
ABIE40_RS04060 -1.7 -7.8 cytochrome c oxidase subunit II compare
ABIE40_RS06915 -1.7 -9.4 COX15/CtaA family protein compare
ABIE40_RS00235 -1.7 -4.0 cytochrome c family protein compare
ABIE40_RS17010 -1.6 -6.5 sugar ABC transporter permease compare
ABIE40_RS05660 -1.6 -3.1 response regulator transcription factor compare
ABIE40_RS04465 -1.6 -8.8 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS30720 -1.6 -1.7 hypothetical protein compare
ABIE40_RS14015 -1.6 -7.1 ROK family transcriptional regulator compare
ABIE40_RS27295 -1.6 -2.2 hypothetical protein compare
ABIE40_RS24355 -1.5 -4.2 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS04470 -1.5 -9.5 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS18640 -1.5 -7.4 M48 family metalloprotease compare
ABIE40_RS19395 -1.5 -3.2 PTS sugar transporter subunit IIA compare
ABIE40_RS27255 -1.5 -1.6 hypothetical protein compare
ABIE40_RS15590 -1.5 -2.7 tol-pal system protein YbgF compare
ABIE40_RS11020 -1.5 -6.3 substrate-binding domain-containing protein compare
ABIE40_RS30915 -1.5 -1.3 hypothetical protein compare
ABIE40_RS28040 -1.5 -5.5 Crp/Fnr family transcriptional regulator compare
ABIE40_RS01765 -1.4 -3.2 [protein-PII] uridylyltransferase compare
ABIE40_RS24730 -1.4 -5.6 glycerol-3-phosphate dehydrogenase compare
ABIE40_RS08935 -1.4 -1.7 RIP metalloprotease RseP compare
ABIE40_RS11465 -1.4 -1.8 nitrile hydratase accessory protein compare
ABIE40_RS17005 -1.4 -5.9 carbohydrate ABC transporter permease compare
ABIE40_RS01810 -1.4 -2.8 RNA methyltransferase compare
ABIE40_RS09660 -1.4 -7.7 AI-2E family transporter compare
ABIE40_RS14455 -1.4 -2.2 NepR family anti-sigma factor compare
ABIE40_RS06730 -1.4 -3.8 riboflavin synthase compare
ABIE40_RS00490 -1.3 -6.0 DNA polymerase I compare
ABIE40_RS27475 -1.3 -1.9 PRC-barrel domain-containing protein compare
ABIE40_RS02095 -1.3 -5.9 nucleoside triphosphate hydrolase compare
ABIE40_RS14980 -1.3 -2.3 glycoside hydrolase family 16 protein compare
ABIE40_RS30775 -1.2 -1.4 ferritin-like domain-containing protein compare
ABIE40_RS09145 -1.2 -3.9 DUF2849 domain-containing protein compare
ABIE40_RS26410 -1.2 -1.5 plasmid stabilization protein compare
ABIE40_RS04505 -1.2 -1.2 YlcI/YnfO family protein compare
ABIE40_RS06720 -1.2 -1.3 transcriptional regulator NrdR compare
ABIE40_RS05670 -1.2 -3.4 membrane protein compare
ABIE40_RS16055 -1.2 -2.8 DUF465 domain-containing protein compare
ABIE40_RS09085 -1.2 -3.7 nitrogen regulation protein NR(II) compare
ABIE40_RS06725 -1.2 -3.6 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS16060 -1.2 -1.6 DUF465 domain-containing protein compare
ABIE40_RS05995 -1.1 -6.1 MurR/RpiR family transcriptional regulator compare
ABIE40_RS30655 -1.1 -1.5 hypothetical protein compare
ABIE40_RS01700 -1.1 -5.2 PhoH family protein compare
ABIE40_RS00370 -1.1 -1.7 type II toxin-antitoxin system HicA family toxin compare
ABIE40_RS29195 -1.1 -1.6 SOS response-associated peptidase family protein compare
ABIE40_RS22660 -1.1 -1.6 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
ABIE40_RS06775 -1.1 -2.8 DUF177 domain-containing protein compare
ABIE40_RS09460 -1.1 -5.2 pantoate--beta-alanine ligase compare
ABIE40_RS16570 -1.1 -2.4 tetratricopeptide repeat protein compare
ABIE40_RS10850 -1.1 -2.6 excinuclease ABC subunit UvrB compare
ABIE40_RS23340 -1.1 -1.7 MSMEG_0567/Sll0786 family nitrogen starvation N-acetyltransferase compare
ABIE40_RS21985 -1.1 -3.4 MarR family transcriptional regulator compare
ABIE40_RS09540 -1.1 -3.2 peptidylprolyl isomerase compare
ABIE40_RS01680 -1.1 -4.0 helix-turn-helix domain-containing protein compare
ABIE40_RS15690 -1.1 -0.7 DoxX family protein compare
ABIE40_RS16280 -1.1 -2.3 hypothetical protein compare
ABIE40_RS10200 -1.0 -1.0 Grx4 family monothiol glutaredoxin compare
ABIE40_RS26855 -1.0 -1.1 hypothetical protein compare
ABIE40_RS24130 -1.0 -1.0 ABC transporter permease compare
ABIE40_RS18255 -1.0 -1.2 hypothetical protein compare
ABIE40_RS17000 -1.0 -2.9 ABC transporter ATP-binding protein compare
ABIE40_RS14855 -1.0 -3.5 NAD-dependent epimerase compare
ABIE40_RS02405 -1.0 -1.9 response regulator transcription factor compare
ABIE40_RS18055 -1.0 -2.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS30550 -1.0 -3.1 DUF2243 domain-containing protein compare
ABIE40_RS02305 -1.0 -3.4 phosphate signaling complex protein PhoU compare
ABIE40_RS05665 -1.0 -1.6 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS05455 -1.0 -1.7 tautomerase family protein compare
ABIE40_RS13140 -1.0 -2.3 CopG family transcriptional regulator compare
ABIE40_RS10310 -1.0 -2.1 STM3941 family protein compare
ABIE40_RS23485 -1.0 -1.3 amino acid ABC transporter ATP-binding protein compare
ABIE40_RS24720 -1.0 -4.2 sugar-binding transcriptional regulator compare
ABIE40_RS25995 -0.9 -1.9 ABC transporter ATP-binding protein compare
ABIE40_RS15940 -0.9 -1.3 YegP family protein compare
ABIE40_RS22300 -0.9 -2.4 superoxide dismutase compare
ABIE40_RS27395 -0.9 -0.9 hypothetical protein compare
ABIE40_RS11960 -0.9 -1.6 energy-dependent translational throttle protein EttA compare
ABIE40_RS19375 -0.9 -2.5 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source D-Fructose in Rhizobium sp. OAE497

For carbon source D-Fructose across organisms