Experiment set1IT001 for Rhizobium sp. OAE497

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS02340 -6.8 -4.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS18590 -6.5 -9.9 homoserine O-succinyltransferase compare
ABIE40_RS18380 -6.2 -11.2 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS17525 -6.1 -3.8 lipoprotein compare
ABIE40_RS18775 -5.7 -13.2 pyruvate carboxylase compare
ABIE40_RS09095 -5.6 -3.9 PAS domain-containing sensor histidine kinase compare
ABIE40_RS06555 -5.6 -3.5 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS00245 -5.5 -11.5 prephenate dehydratase compare
ABIE40_RS09155 -5.5 -5.3 DUF934 domain-containing protein compare
ABIE40_RS13330 -5.4 -13.0 2-isopropylmalate synthase compare
ABIE40_RS17530 -5.4 -3.7 diaminopimelate decarboxylase compare
ABIE40_RS09545 -5.3 -3.7 anthranilate phosphoribosyltransferase compare
ABIE40_RS16320 -5.3 -3.6 histidinol-phosphatase compare
ABIE40_RS09150 -5.2 -16.7 nitrite/sulfite reductase compare
ABIE40_RS19040 -5.2 -7.9 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS03665 -5.2 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS20460 -5.1 -3.5 precorrin-3B synthase compare
ABIE40_RS19050 -5.1 -10.9 3-isopropylmalate dehydrogenase compare
ABIE40_RS08635 -5.1 -7.0 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS01970 -5.1 -3.5 acetylglutamate kinase compare
ABIE40_RS02325 -5.1 -3.5 ornithine carbamoyltransferase compare
ABIE40_RS19435 -5.0 -3.1 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS10725 -5.0 -3.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS03660 -5.0 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS18920 -5.0 -5.4 glutamate 5-kinase compare
ABIE40_RS19355 -5.0 -4.5 thioredoxin compare
ABIE40_RS11150 -5.0 -5.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS20450 -4.9 -3.4 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS11950 -4.9 -8.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS02725 -4.9 -6.7 histidinol dehydrogenase compare
ABIE40_RS19460 -4.9 -3.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS10720 -4.8 -3.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS08645 -4.7 -3.2 LL-diaminopimelate aminotransferase compare
ABIE40_RS06730 -4.7 -4.6 riboflavin synthase compare
ABIE40_RS19440 -4.7 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19330 -4.7 -3.2 phosphoribosylanthranilate isomerase compare
ABIE40_RS11175 -4.7 -3.2 cobyric acid synthase compare
ABIE40_RS09725 -4.6 -3.2 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS10180 -4.6 -3.2 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS20440 -4.6 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS13410 -4.6 -3.2 anthranilate synthase compare
ABIE40_RS16070 -4.5 -3.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS20435 -4.5 -3.1 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS06930 -4.5 -4.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS11165 -4.5 -3.0 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS16655 -4.4 -6.8 creatininase family protein compare
ABIE40_RS11495 -4.4 -3.0 acetolactate synthase 3 large subunit compare
ABIE40_RS18925 -4.4 -5.9 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS01930 -4.3 -2.6 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS17595 -4.3 -3.0 histidinol-phosphate transaminase compare
ABIE40_RS19450 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS14980 -4.3 -2.9 glycoside hydrolase family 16 protein compare
ABIE40_RS06270 -4.3 -7.1 amidophosphoribosyltransferase compare
ABIE40_RS11095 -4.2 -2.9 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS09090 -4.2 -5.8 nitrogen regulation protein NR(I) compare
ABIE40_RS09360 -4.2 -4.1 excinuclease ABC subunit UvrA compare
ABIE40_RS17650 -4.2 -4.9 cobaltochelatase subunit CobS compare
ABIE40_RS03190 -4.1 -2.9 phosphogluconate dehydratase compare
ABIE40_RS06560 -4.1 -4.9 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS20430 -4.1 -2.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS19130 -4.1 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS11105 -4.1 -5.6 cobyrinate a,c-diamide synthase compare
ABIE40_RS12925 -4.0 -12.8 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS20465 -4.0 -2.8 precorrin-6A synthase (deacetylating) compare
ABIE40_RS08005 -3.9 -2.6 dihydroxy-acid dehydratase compare
ABIE40_RS03405 -3.9 -2.7 anti-sigma factor compare
ABIE40_RS19445 -3.9 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS15345 -3.8 -9.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS12135 -3.8 -2.6 methionine synthase compare
ABIE40_RS11155 -3.8 -6.8 cobaltochelatase subunit CobN compare
ABIE40_RS06720 -3.7 -2.5 transcriptional regulator NrdR compare
ABIE40_RS09140 -3.6 -9.9 siroheme synthase CysG compare
ABIE40_RS14990 -3.6 -12.6 glycosyltransferase family 2 protein compare
ABIE40_RS24490 -3.6 -1.9 flavin reductase compare
ABIE40_RS00580 -3.6 -2.5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS00595 -3.5 -10.0 glucokinase compare
ABIE40_RS02320 -3.5 -5.8 aspartate aminotransferase family protein compare
ABIE40_RS17590 -3.4 -2.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS00930 -3.4 -7.2 ABC transporter permease compare
ABIE40_RS16490 -3.3 -12.7 glycogen synthase GlgA compare
ABIE40_RS10155 -3.3 -2.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS06725 -3.2 -5.9 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS20445 -3.2 -1.7 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS17645 -3.2 -4.8 cobaltochelatase subunit CobT compare
ABIE40_RS06050 -3.2 -6.7 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS14955 -3.1 -10.2 sugar transferase compare
ABIE40_RS05430 -3.1 -3.7 phosphoribosylamine--glycine ligase compare
ABIE40_RS05660 -3.1 -4.2 response regulator transcription factor compare
ABIE40_RS01765 -3.1 -6.2 [protein-PII] uridylyltransferase compare
ABIE40_RS05685 -3.0 -12.8 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS18300 -2.9 -8.6 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS00935 -2.9 -6.7 ABC transporter substrate-binding protein compare
ABIE40_RS19455 -2.9 -2.0 DUF2628 domain-containing protein compare
ABIE40_RS10345 -2.9 -6.3 RNA polymerase-binding protein DksA compare
ABIE40_RS26410 -2.8 -2.7 plasmid stabilization protein compare
ABIE40_RS12855 -2.7 -10.3 glycosyltransferase family 2 protein compare
ABIE40_RS07740 -2.7 -2.7 elongation factor Tu compare
ABIE40_RS20370 -2.7 -2.7 type II toxin-antitoxin system Phd/YefM family antitoxin compare
ABIE40_RS18720 -2.6 -2.5 polyprenyl synthetase family protein compare
ABIE40_RS14025 -2.6 -14.2 sugar ABC transporter permease compare
ABIE40_RS05690 -2.6 -4.4 cytochrome c-type biogenesis protein compare
ABIE40_RS04475 -2.6 -12.6 phosphoadenylyl-sulfate reductase compare
ABIE40_RS18880 -2.5 -11.7 UDP-glucose 4-epimerase GalE compare
ABIE40_RS22300 -2.5 -5.2 superoxide dismutase compare
ABIE40_RS08425 -2.5 -3.3 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS20455 -2.4 -2.4 precorrin-8X methylmutase compare
ABIE40_RS14855 -2.4 -6.6 NAD-dependent epimerase compare
ABIE40_RS10390 -2.3 -2.5 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS14985 -2.3 -2.5 glycosyltransferase compare
ABIE40_RS14020 -2.3 -11.3 D-xylose ABC transporter substrate-binding protein compare
ABIE40_RS11060 -2.3 -5.3 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS09720 -2.3 -4.0 GTP cyclohydrolase I FolE compare
ABIE40_RS19480 -2.3 -3.4 DUF1402 family protein compare
ABIE40_RS04470 -2.3 -12.2 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS13370 -2.2 -8.6 CDF family cation efflux transporter EmfA compare
ABIE40_RS08935 -2.2 -3.3 RIP metalloprotease RseP compare
ABIE40_RS16390 -2.2 -1.4 hypothetical protein compare
ABIE40_RS18290 -2.2 -11.0 heme ABC transporter permease compare
ABIE40_RS28815 -2.2 -7.2 GNAT family N-acetyltransferase compare
ABIE40_RS08695 -2.2 -3.3 hypothetical protein compare
ABIE40_RS19365 -2.2 -3.6 double-strand break repair protein AddB compare
ABIE40_RS14030 -2.2 -5.2 ATP-binding cassette domain-containing protein compare
ABIE40_RS19385 -2.2 -6.8 adenosylhomocysteinase compare
ABIE40_RS19360 -2.1 -4.4 double-strand break repair helicase AddA compare
ABIE40_RS04465 -2.1 -11.2 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS09980 -2.1 -2.3 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS10200 -2.1 -1.9 Grx4 family monothiol glutaredoxin compare
ABIE40_RS09145 -2.0 -5.0 DUF2849 domain-containing protein compare
ABIE40_RS09540 -2.0 -4.0 peptidylprolyl isomerase compare
ABIE40_RS19260 -2.0 -3.0 DNA polymerase III subunit epsilon compare
ABIE40_RS01705 -2.0 -8.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS16570 -1.9 -3.1 tetratricopeptide repeat protein compare
ABIE40_RS01055 -1.9 -5.7 translation elongation factor 4 compare
ABIE40_RS18685 -1.9 -3.4 beta-ketoacyl-ACP reductase compare
ABIE40_RS08140 -1.9 -10.5 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS09170 -1.8 -4.1 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS07335 -1.8 -1.5 50S ribosomal protein L33 compare
ABIE40_RS00725 -1.8 -4.2 DNA cytosine methyltransferase compare
ABIE40_RS05670 -1.7 -6.0 membrane protein compare
ABIE40_RS18640 -1.7 -7.9 M48 family metalloprotease compare
ABIE40_RS27520 -1.7 -1.6 hypothetical protein compare
ABIE40_RS00925 -1.7 -4.2 ABC transporter permease compare
ABIE40_RS08970 -1.7 -7.5 citrate synthase compare
ABIE40_RS05680 -1.7 -5.7 cytochrome c maturation protein CcmE compare
ABIE40_RS08865 -1.7 -6.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS05155 -1.6 -3.6 DUF5330 domain-containing protein compare
ABIE40_RS12360 -1.6 -7.5 DUF5131 family protein compare
ABIE40_RS30495 -1.6 -1.1 LuxR C-terminal-related transcriptional regulator compare
ABIE40_RS10755 -1.6 -1.9 hypothetical protein compare
ABIE40_RS23670 -1.6 -1.9 hypothetical protein compare
ABIE40_RS12845 -1.6 -2.3 glycosyltransferase family 4 protein compare
ABIE40_RS19395 -1.5 -2.8 PTS sugar transporter subunit IIA compare
ABIE40_RS06775 -1.5 -2.5 DUF177 domain-containing protein compare
ABIE40_RS04215 -1.5 -2.3 sensor domain-containing phosphodiesterase compare
ABIE40_RS08600 -1.5 -5.9 trigger factor compare
ABIE40_RS19245 -1.5 -3.4 Maf-like protein compare
ABIE40_RS09945 -1.5 -5.8 glycine cleavage system protein GcvH compare
ABIE40_RS11490 -1.5 -4.3 acetolactate synthase small subunit compare
ABIE40_RS27930 -1.4 -1.2 nuclear transport factor 2 family protein compare
ABIE40_RS17010 -1.4 -5.6 sugar ABC transporter permease compare
ABIE40_RS27250 -1.4 -1.6 hypothetical protein compare
ABIE40_RS20905 -1.4 -4.5 IclR family transcriptional regulator compare
ABIE40_RS00960 -1.4 -2.7 formyltetrahydrofolate deformylase compare
ABIE40_RS06220 -1.3 -9.7 citramalate synthase compare
ABIE40_RS06710 -1.3 -2.5 L,D-transpeptidase family protein compare
ABIE40_RS27395 -1.3 -1.2 hypothetical protein compare
ABIE40_RS09940 -1.3 -5.2 glycine cleavage system aminomethyltransferase GcvT compare
ABIE40_RS01135 -1.2 -0.8 50S ribosomal protein L20 compare
ABIE40_RS10850 -1.2 -3.1 excinuclease ABC subunit UvrB compare
ABIE40_RS00490 -1.2 -6.1 DNA polymerase I compare
ABIE40_RS02770 -1.2 -2.0 OsmC family protein compare
ABIE40_RS27530 -1.2 -1.8 hypothetical protein compare
ABIE40_RS18125 -1.2 -4.1 translational GTPase TypA compare
ABIE40_RS27665 -1.2 -2.4 hypothetical protein compare
ABIE40_RS10935 -1.2 -1.7 Fur family transcriptional regulator compare
ABIE40_RS04820 -1.2 -1.7 TetR family transcriptional regulator compare
ABIE40_RS03745 -1.2 -5.0 hypothetical protein compare
ABIE40_RS18055 -1.2 -3.2 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS17565 -1.2 -1.8 ABC transporter permease compare
ABIE40_RS11875 -1.2 -1.8 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS18735 -1.2 -3.4 TetR/AcrR family transcriptional regulator compare
ABIE40_RS17005 -1.2 -4.9 carbohydrate ABC transporter permease compare
ABIE40_RS09950 -1.2 -7.6 aminomethyl-transferring glycine dehydrogenase compare
ABIE40_RS00340 -1.2 -2.3 30S ribosome-binding factor RbfA compare
ABIE40_RS13005 -1.2 -5.1 pyrroline-5-carboxylate reductase compare
ABIE40_RS11880 -1.1 -2.3 division/cell wall cluster transcriptional repressor MraZ compare
ABIE40_RS29010 -1.1 -1.2 hypothetical protein compare
ABIE40_RS06700 -1.1 -2.5 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS21840 -1.1 -1.4 lysophospholipid acyltransferase family protein compare
ABIE40_RS00585 -1.1 -4.5 4-hydroxy-tetrahydrodipicolinate reductase compare
ABIE40_RS11065 -1.1 -2.3 zinc-binding dehydrogenase compare
ABIE40_RS26290 -1.1 -1.6 SDR family oxidoreductase compare
ABIE40_RS30895 -1.1 -1.1 cytochrome o ubiquinol oxidase subunit IV compare
ABIE40_RS30865 -1.1 -1.4 CheR family methyltransferase compare
ABIE40_RS19100 -1.1 -6.3 lytic transglycosylase domain-containing protein compare
ABIE40_RS27110 -1.0 -1.5 helix-turn-helix transcriptional regulator compare
ABIE40_RS16210 -1.0 -4.8 homospermidine synthase compare
ABIE40_RS24730 -1.0 -4.0 glycerol-3-phosphate dehydrogenase compare
ABIE40_RS26785 -1.0 -2.4 CsbD family protein compare
ABIE40_RS05025 -1.0 -2.0 MucR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Rhizobium sp. OAE497 in carbon source experiments

For carbon source D-Glucose across organisms