Experiment set19S389 for Agrobacterium fabrum C58

Compare to:

Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct

200 most detrimental genes:

  gene name fitness t score description  
Atu1149 +2.0 2.3 adenylate cyclase compare
Atu1581 +1.7 2.6 hypothetical protein compare
Atu8034 +1.4 4.3 hypothetical protein compare
Atu8035 +1.3 2.9 hypothetical protein compare
Atu0728 +1.3 2.2 hypothetical protein compare
Atu1439 +1.2 1.8 hypothetical protein compare
Atu0886 +1.2 1.5 hypothetical protein compare
Atu0115 +1.1 1.4 hypothetical protein compare
Atu0201 +1.1 1.6 hypothetical protein compare
Atu4896 +1.0 2.3 acetyltransferase compare
Atu2140 +0.9 3.2 hypothetical protein compare
Atu1570 +0.9 1.0 hypothetical protein compare
Atu2248 +0.9 1.3 hypothetical protein compare
Atu1466 +0.9 1.9 hypothetical protein compare
Atu5057 +0.9 1.4 hypothetical protein compare
Atu4677 +0.9 1.5 hypothetical protein compare
Atu2067 +0.9 1.0 hypothetical protein compare
Atu2634 +0.9 2.1 hypothetical protein compare
Atu0812 +0.9 3.1 hypothetical protein compare
Atu3032 +0.9 1.3 hypothetical protein compare
Atu3160 +0.8 1.4 hypothetical protein compare
Atu8032 +0.8 1.4 hypothetical protein compare
Atu0888 +0.8 3.5 transcriptional regulator, MerR family compare
Atu3120 +0.8 0.8 hypothetical protein compare
Atu1679 +0.8 1.8 peptidyl prolyl cis-trans isomerase compare
Atu1009 +0.8 1.9 hypothetical protein compare
Atu0795 +0.8 1.1 hypothetical protein compare
Atu3443 +0.8 2.1 hypothetical protein compare
Atu0528 +0.7 1.6 large conductance mechanosensitive channel protein compare
Atu3674 +0.7 2.8 hypothetical protein compare
Atu0036 +0.7 1.2 hypothetical protein compare
Atu8156 +0.7 1.6 hypothetical protein compare
Atu0566 +0.7 1.3 hypothetical protein compare
Atu0026 +0.7 0.6 hypothetical protein compare
Atu3126 +0.7 2.7 hypothetical protein compare
Atu1252 +0.7 1.4 hypothetical protein compare
Atu2192 +0.7 0.9 hypothetical protein compare
Atu4410 +0.6 1.3 periplasmic nitrate reductase, cytochrome c-type protein compare
Atu2286 +0.6 0.7 hypothetical protein compare
Atu4035 +0.6 2.5 two component response regulator compare
Atu4459 +0.6 1.4 6-O-methylguanine DNA methyltransferase compare
Atu1952 +0.6 0.7 hypothetical protein compare
Atu3614 +0.6 4.2 glyoxalase II compare
Atu5427 +0.6 1.7 hypothetical protein compare
Atu2678 +0.6 3.4 2'-5' RNA ligase compare
Atu1968 +0.6 1.1 hypothetical protein compare
Atu4468 +0.6 2.9 iron transport ABC transporter permease compare
Atu1083 +0.6 2.6 hypothetical protein compare
Atu0851 +0.6 1.7 hypothetical protein compare
Atu4456 +0.6 2.7 CysZ-like protein compare
Atu3767 +0.6 2.0 diguanylate cyclase compare
Atu3807 +0.6 1.6 AsnC family transcriptional regulator compare
Atu3775 +0.6 1.9 hypothetical protein compare
Atu4744 +0.6 2.2 sugar ABC transporter substrate-binding protein compare
Atu4034 +0.6 3.6 two component sensor kinase compare
Atu1068 +0.6 2.8 hypothetical protein compare
Atu4155 +0.6 2.4 aliphatic sulfonate ABC transporter permease compare
Atu4220 +0.6 2.1 short-chain dehydrogenase compare
Atu1469 +0.6 1.0 hypothetical protein compare
Atu3728 +0.6 2.3 hypothetical protein compare
Atu8193 +0.6 2.6 hypothetical protein compare
Atu5121 +0.6 2.6 two component response regulator compare
Atu1621 +0.6 2.1 hypothetical protein compare
Atu3561 +0.6 1.9 hypothetical protein compare
Atu1418 +0.5 2.2 methylenetetrahydrofolate reductase compare
Atu0378 +0.5 1.6 hydrolase compare
Atu4032 +0.5 2.2 sugar ABC transporter ATPase compare
Atu0524 +0.5 3.1 transcriptional regulator, LuxR family compare
Atu8029 +0.5 0.9 hypothetical protein compare
Atu2439 +0.5 0.3 hypothetical protein compare
Atu3962 +0.5 1.4 calcium-binding protein, regucalcin compare
Atu5145 +0.5 1.8 acetyltransferase compare
Atu3416 +0.5 1.8 ABC transporter substrate binding protein compare
Atu3822 +0.5 1.8 hypothetical protein compare
Atu4516 +0.5 1.2 branched chain amino acid ABC transporter ATPase compare
Atu8170 +0.5 1.2 hypothetical protein compare
Atu1971 +0.5 1.8 hypothetical protein compare
Atu0105 +0.5 1.0 hypothetical protein compare
Atu2276 +0.5 1.8 ABC transporter, substrate binding protein (branched chain amino acid) compare
Atu5493 +0.5 1.3 hypothetical protein compare
Atu4427 +0.5 1.9 replicative DNA helicase compare
Atu8157 +0.5 2.3 hypothetical protein compare
Atu8082 +0.5 1.1 hypothetical protein compare
Atu1849 +0.5 2.0 hypothetical protein compare
Atu3472 +0.5 1.7 2-oxoisovalerate dehydrogenase subunit beta compare
Atu1724 +0.5 2.3 hypothetical protein compare
Atu0381 +0.5 1.0 hypothetical protein compare
Atu8052 +0.5 1.0 hypothetical protein compare
Atu0843 +0.5 3.4 P type cation (metal) transporter, ATPase component compare
Atu0770 +0.5 1.8 cytochrome C oxidase assembly protein compare
Atu3541 +0.5 1.5 hypothetical protein compare
Atu0854 +0.5 2.0 hypothetical protein compare
Atu8125 +0.5 2.2 hypothetical protein compare
Atu8126 +0.5 1.7 putative phage tail protein I compare
Atu5158 +0.5 2.1 hypothetical protein compare
Atu1776 +0.5 2.8 hypothetical protein compare
Atu5205 +0.5 2.1 hypothetical protein compare
Atu1260 +0.5 0.8 hypothetical protein compare
Atu5114 +0.5 1.4 hypothetical protein compare
Atu5164 +0.5 0.5 type IV secretion protein AvhB3 compare
Atu0819 +0.5 1.4 hypothetical protein compare
Atu1714 +0.5 0.6 exonuclease III compare
Atu1227 +0.5 2.4 hypothetical protein compare
Atu0063 +0.5 1.6 ABC transporter, substrate binding protein (sugar) compare
Atu1184 +0.5 1.0 hypothetical protein compare
Atu1674 +0.5 1.8 hypothetical protein compare
Atu0861 +0.5 1.0 hypothetical protein compare
Atu2479 +0.5 1.6 tRNA-Gly compare
Atu0815 +0.5 0.9 hypothetical protein compare
Atu5162 +0.5 2.0 type IV secretion protein AvhB1 compare
Atu4234 +0.5 2.0 amino acid ABC transporter permease compare
Atu8190 +0.5 2.0 hypothetical protein compare
Atu5152 +0.5 1.9 hypothetical protein compare
Atu1741 +0.4 1.8 hypothetical protein compare
Atu1760 +0.4 0.4 hypothetical protein compare
Atu1412 +0.4 2.0 ABC transporter, membrane spanning protein compare
Atu3476 +0.4 1.4 AsnC family transcriptional regulator compare
Atu1326 +0.4 1.4 acetyltransferase compare
Atu0369 +0.4 1.3 hypothetical protein compare
Atu3011 +0.4 0.8 ArsR family transcriptional regulator compare
Atu3850 +0.4 1.9 hypothetical protein compare
Atu1568 +0.4 2.1 transcriptional regulator, TetR family compare
Atu3291 +0.4 2.0 Lpr family transcriptional regulator compare
Atu4659 +0.4 1.7 AraC family transcriptional regulator compare
Atu0809 +0.4 0.7 hypothetical protein compare
Atu2702 +0.4 1.9 hypothetical protein compare
Atu0853 +0.4 1.4 hypothetical protein compare
Atu0869 +0.4 1.9 hypothetical protein compare
Atu3861 +0.4 1.9 acyl-CoA hydrolase compare
Atu0300 +0.4 1.7 methyltransferase compare
Atu2769 +0.4 2.2 acetyl-CoA acetyltransferase; poly-beta-hydroxybutyrate biosynthesis compare
Atu5451 +0.4 0.6 hypothetical protein compare
Atu3585 +0.4 1.8 glutathione S-transferase compare
Atu0525 +0.4 1.6 transcriptional regulator, LuxR family compare
Atu1737 +0.4 0.6 hypothetical protein compare
Atu4589 +0.4 1.3 transmembrane transport protein compare
Atu4359 +0.4 2.0 sugar ABC transporter permease compare
Atu4611 +0.4 1.3 transposase compare
Atu3117 +0.4 1.5 hypothetical protein compare
Atu5119 +0.4 2.8 two component response regulator compare
Atu2177 +0.4 1.4 hypothetical protein compare
Atu2172 +0.4 1.6 multidrug efflux protein compare
Atu4093 +0.4 1.7 hypothetical protein compare
Atu2662 +0.4 0.4 acetyltransferase compare
Atu4343 +0.4 1.7 hypothetical protein compare
Atu5540 +0.4 0.5 hypothetical protein compare
Atu1699 +0.4 1.2 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu3468 +0.4 0.3 hypothetical protein compare
Atu5173 +0.4 0.9 dehydrogenase compare
Atu4582 +0.4 1.1 ferredoxin compare
Atu4633 +0.4 0.9 phosphate permease (N-terminal) compare
Atu1525 +0.4 1.3 hypothetical protein compare
Atu4436 +0.4 2.2 IS5 family transposase compare
Atu0742 +0.4 2.3 hypothetical protein compare
Atu4242 +0.4 1.8 hypothetical protein compare
Atu3892 +0.4 1.7 hypothetical protein compare
Atu2511 +0.4 2.0 D-alanine aminotransferase compare
Atu1998 +0.4 1.3 hypothetical protein compare
Atu0751 +0.4 1.7 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu4329 +0.4 1.5 polysaccharide export protein compare
Atu0458 +0.4 1.8 hypothetical protein compare
Atu1038 +0.4 1.3 two component response regulator compare
Atu4013 +0.4 1.6 adenylate cyclase compare
Atu5196 +0.4 1.1 hypothetical protein compare
Atu2166 +0.4 1.6 hypothetical protein compare
Atu5169 +0.4 1.4 type IV secretion protein AvhB8 compare
Atu2609 +0.4 1.8 transcriptional regulator, ROK family compare
Atu6107 +0.4 1.4 hypothetical protein compare
Atu0206 +0.4 0.9 hypothetical protein compare
Atu5129 +0.4 2.8 ABC transporter substrate binding protein (mannopine) compare
Atu2683 +0.4 0.7 hypothetical protein compare
Atu2294 +0.4 1.2 aminoglycoside N6'-acetyltransferase compare
Atu0210 +0.4 1.4 hypothetical protein compare
Atu0332 +0.4 1.2 RNA polymerase sigma-54 factor compare
Atu2407 +0.4 1.4 urease gamma subunit compare
Atu2797 +0.4 1.2 cobalamin biosynthesis protein compare
Atu5457 +0.4 2.1 dihydrodipicolinate synthase compare
Atu0947 +0.4 0.9 transcriptional regulator, AsnC family compare
Atu4882 +0.4 0.6 hypothetical protein compare
Atu4159 +0.4 1.1 AsnC family transcriptional regulator compare
Atu4029 +0.4 1.5 gluconolactonase compare
Atu0951 +0.4 1.8 large terminase phage packaging protein compare
Atu0858 +0.4 1.7 putative carboxymuconolactone decarboxylase compare
Atu3193 +0.4 0.7 MarR family transcriptional regulator compare
Atu0181 +0.4 0.9 hypothetical protein compare
Atu2359 +0.4 2.6 hypothetical protein compare
Atu3578 +0.4 1.2 glycerol-3-phosphate dehydrogenase compare
Atu1697 +0.4 1.9 MFS permease compare
Atu5192 +0.4 1.9 hypothetical protein compare
Atu3124 +0.4 1.2 hypothetical protein compare
Atu2433 +0.4 0.5 hypothetical protein compare
Atu3666 +0.4 1.4 hypothetical protein compare
Atu3708 +0.4 2.2 outer surface protein compare
Atu3392 +0.4 1.0 methyltransferase compare
Atu2345 +0.4 2.6 hypothetical protein compare
Atu2058 +0.4 1.4 hypothetical protein compare
Atu0824 +0.4 0.5 hypothetical protein compare
Atu3582 +0.4 1.1 hypothetical protein compare
Atu4584 +0.4 2.0 TetR family transcriptional regulator compare
Atu3516 +0.4 1.0 MutT family NTP pyrophosphatase compare


Specific Phenotypes

For 4 genes in this experiment

For in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct in Agrobacterium fabrum C58

For in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct across organisms