Experiment set19IT085 for Escherichia coli BW25113

Compare to:

Papa dilution 10-1 cacl2 maltose

Genes with specific phenotypes:

  gene name fitness t score description  
b4292 fecR +1.0 5.8 KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport (NCBI) compare
b0593 entC +1.0 5.4 isochorismate synthase (NCBI) compare
b3418 malT +1.0 8.8 transcriptional regulator MalT (NCBI) compare
b0591 ybdA +1.0 5.9 predicted transporter (NCBI) compare
b2142 yohK +1.1 6.8 predicted inner membrane protein (NCBI) compare
b0262 afuC +1.1 5.5 putative ATP-binding component of a transport system (VIMSS) compare
b1902 yecI +1.1 5.4 predicted ferritin-like protein (NCBI) compare
b4367 fhuF +1.1 6.3 ferric iron reductase involved in ferric hydroximate transport (NCBI) compare
b1132 hflD +1.1 5.1 hypothetical protein (NCBI) compare
b1786 yeaJ +1.1 9.0 orf, hypothetical protein (VIMSS) compare
b2662 gabT +1.2 6.8 4-aminobutyrate aminotransferase (NCBI) compare
b0268 yagE +1.2 5.9 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage (NCBI) compare
b4093 phnO +1.2 7.0 predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) compare
b0261 mmuM +1.3 8.5 homocysteine methyltransferase (NCBI) compare
b4102 phnF +1.3 5.8 predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation (NCBI) compare
b4098 phnJ +1.3 9.0 carbon-phosphorus lyase complex subunit (NCBI) compare
b3480 nikE +1.4 8.8 nickel transporter subunit (NCBI) compare
b2661 gabD +1.4 9.5 succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI) compare
b4096 phnL +1.4 5.9 carbon-phosphorus lyase complex subunit (NCBI) compare
b3422 rtcR +1.5 10.7 sigma 54-dependent transcriptional regulator of rtcBA expression (NCBI) compare
b0904 focA +1.5 7.5 formate transporter (NCBI) compare
b4099 phnI +1.5 10.2 carbon-phosphorus lyase complex subunit (NCBI) compare
b3478 nikC +1.5 10.5 nickel transporter subunit (NCBI) compare
b4567 yjjZ +1.5 5.1 hypothetical protein (NCBI) compare
b4582 yoeA +1.5 6.9 no description compare
b4346 mcrB +1.5 7.2 component of McrBC 5-methylcytosine restriction system (VIMSS) compare
b3479 nikD +1.5 11.2 nickel transporter subunit (NCBI) compare
b0531 sfmC +1.5 5.7 pilin chaperone, periplasmic (NCBI) compare
b4181 yjfI +1.7 5.4 hypothetical protein (NCBI) compare
b4094 phnN +1.7 7.5 ribose 1,5-bisphosphokinase (NCBI) compare
b4095 phnM +1.7 9.1 carbon-phosphorus lyase complex subunit (NCBI) compare
b4370 leuQ +1.8 6.7 tRNA-Leu (NCBI) compare
b0269 yagF +1.9 12.6 CP4-6 prophage; predicted dehydratase (NCBI) compare
b4017 arpA +1.9 5.4 regulator of acetyl CoA synthetase (NCBI) compare
b4253 yjgL +2.2 5.5 orf, hypothetical protein (VIMSS) compare
b3622 rfaL +2.5 5.6 O-antigen ligase (NCBI) compare
b0569 nfrB +10.2 51.4 bacteriophage N4 receptor, inner membrane subunit (NCBI) compare
b0568 nfrA +10.6 96.3 bacteriophage N4 receptor, outer membrane subunit (NCBI) compare


Specific phenotypes for phage Papa across organisms