| | gene | name | fitness | t score | description | |
|---|
| b0888 | trxB | -4.3 | -5.1 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b0439 | lon | -3.6 | -5.5 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2819 | recD | -3.5 | -10.8 | exonuclease V (RecBCD complex), alpha chain (NCBI) | compare |
| b3839 | tatC | -3.4 | -8.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2830 | nudH | -3.1 | -2.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0053 | surA | -3.0 | -7.1 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2620 | smpB | -3.0 | -2.7 | SsrA-binding protein (NCBI) | compare |
| b1860 | ruvB | -2.7 | -1.8 | Holliday junction DNA helicase B (NCBI) | compare |
| b0912 | ihfB | -2.6 | -6.2 | integration host factor subunit beta (NCBI) | compare |
| b4603 | rseX | -2.6 | -1.2 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1293 | sapB | -2.5 | -2.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4171 | miaA | -2.4 | -4.3 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3816 | corA | -2.4 | -11.1 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b0683 | fur | -2.3 | -2.9 | ferric uptake regulator (NCBI) | compare |
| b3390 | aroK | -2.2 | -3.0 | shikimate kinase I (NCBI) | compare |
| b2501 | ppk | -2.2 | -11.2 | polyphosphate kinase (NCBI) | compare |
| b1493 | gadB | -2.1 | -1.7 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b3613 | yibP | -2.1 | -4.2 | putative membrane protein (VIMSS) | compare |
| b1361 | ydaW | -2.1 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b0890 | ftsK | -2.0 | -4.6 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3706 | trmE | -2.0 | -4.9 | tRNA modification GTPase (NCBI) | compare |
| b3741 | gidA | -1.9 | -3.5 | glucose-inhibited division protein A (NCBI) | compare |
| b3781 | trxA | -1.9 | -3.8 | thioredoxin 1 (VIMSS) | compare |
| b3628 | rfaB | -1.9 | -10.6 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b3977 | tyrU | -1.9 | -1.5 | tRNA-Tyr (NCBI) | compare |
| b3630 | rfaP | -1.9 | -10.4 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0730 | mngR | -1.8 | -2.1 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b2912 | ygfA | -1.8 | -4.5 | putative ligase (VIMSS) | compare |
| b4402 | yjjY | -1.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b3916 | pfkA | -1.8 | -2.6 | 6-phosphofructokinase (NCBI) | compare |
| b2935 | tktA | -1.8 | -2.0 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1290 | sapF | -1.7 | -2.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2814 | metZ | -1.7 | -2.4 | tRNA-Met (NCBI) | compare |
| b2846 | yqeH | -1.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2569 | lepA | -1.6 | -5.0 | GTP-binding protein LepA (NCBI) | compare |
| b4146 | yjeK | -1.6 | -1.5 | predicted lysine aminomutase (NCBI) | compare |
| b4527 | b1354 | -1.5 | -5.2 | orf, hypothetical protein (VIMSS) | compare |
| b4593 | ymgI | -1.5 | -0.9 | hypothetical protein (RefSeq) | compare |
| b3863 | polA | -1.5 | -1.9 | DNA polymerase I (NCBI) | compare |
| b0688 | pgm | -1.5 | -4.4 | phosphoglucomutase (NCBI) | compare |
| b4201 | priB | -1.4 | -3.4 | primosomal replication protein N (NCBI) | compare |
| b3652 | recG | -1.4 | -8.8 | ATP-dependent DNA helicase (NCBI) | compare |
| b0767 | ybhE | -1.4 | -3.7 | 6-phosphogluconolactonase (NCBI) | compare |
| b2822 | recC | -1.4 | -3.6 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1827 | kdgR | -1.4 | -4.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0167 | glnD | -1.4 | -4.7 | PII uridylyl-transferase (NCBI) | compare |
| b4535 | yniD | -1.4 | -1.5 | predicted protein (RefSeq) | compare |
| b0630 | lipB | -1.4 | -1.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1286 | rnb | -1.4 | -2.2 | exoribonuclease II (NCBI) | compare |
| b0142 | folK | -1.4 | -0.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3979 | thrT | -1.3 | -0.6 | tRNA-Thr (NCBI) | compare |
| b1291 | sapD | -1.3 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4025 | pgi | -1.3 | -7.7 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1355 | b1355 | -1.3 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b4179 | vacB | -1.3 | -6.0 | putative enzyme (VIMSS) | compare |
| b3183 | obgE | -1.2 | -1.7 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3405 | ompR | -1.2 | -4.4 | osmolarity response regulator (NCBI) | compare |
| b2699 | recA | -1.2 | -1.1 | recombinase A (NCBI) | compare |
| b2318 | truA | -1.2 | -3.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0739 | tolA | -1.2 | -3.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1187 | fadR | -1.2 | -6.2 | fatty acid metabolism regulator (NCBI) | compare |
| b1712 | ihfA | -1.2 | -1.1 | integration host factor subunit alpha (NCBI) | compare |
| b3811 | xerC | -1.2 | -1.9 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1863 | ruvC | -1.2 | -1.9 | Holliday junction resolvase (NCBI) | compare |
| b1292 | sapC | -1.2 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0738 | tolR | -1.1 | -2.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3290 | trkA | -1.1 | -1.7 | potassium transporter peripheral membrane component (NCBI) | compare |
| b2518 | ndk | -1.1 | -2.8 | nucleoside diphosphate kinase (NCBI) | compare |
| b0114 | aceE | -1.1 | -0.8 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b4239 | treC | -1.1 | -1.7 | trehalose-6-P hydrolase (NCBI) | compare |
| b4520 | ymgF | -1.1 | -2.0 | hypothetical protein (NCBI) | compare |
| b4701 | sokX | -1.1 | -1.2 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2431 | b2431 | -1.1 | -6.2 | orf, hypothetical protein (VIMSS) | compare |
| b1109 | ndh | -1.1 | -4.0 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b3787 | rffD | -1.1 | -7.5 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1130 | phoP | -1.1 | -1.3 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2895 | fldB | -1.1 | -3.6 | flavodoxin 2 (NCBI) | compare |
| b0605 | ahpC | -1.1 | -3.3 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b4522 | yciX_1 | -1.1 | -2.9 | hypothetical protein (NCBI) | compare |
| b3844 | fre | -1.0 | -5.5 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1105 | ycfM | -1.0 | -4.2 | predicted outer membrane lipoprotein (NCBI) | compare |
| b3790 | rffC | -1.0 | -5.0 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3778 | rep | -1.0 | -6.0 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3838 | tatB | -1.0 | -3.5 | sec-independent translocase (NCBI) | compare |
| b3725 | pstB | -1.0 | -0.7 | phosphate transporter subunit (NCBI) | compare |
| b3842 | rfaH | -1.0 | -4.7 | transcriptional activator RfaH (NCBI) | compare |
| b4006 | purH | -1.0 | -7.3 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b3794 | rffM | -1.0 | -5.1 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1861 | ruvA | -1.0 | -1.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1907 | tyrP | -0.9 | -4.4 | tyrosine transporter (NCBI) | compare |
| b3204 | ptsN | -0.9 | -3.9 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3238 | yhcN | -0.9 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1269 | rluB | -0.9 | -2.4 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b2531 | iscR | -0.9 | -1.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1984 | asnW | -0.9 | -1.2 | tRNA-Asn (NCBI) | compare |
| b4552 | yrhC | -0.9 | -0.9 | no description | compare |
| b0406 | tgt | -0.9 | -4.2 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3389 | aroB | -0.9 | -6.1 | 3-dehydroquinate synthase (NCBI) | compare |
| b2528 | iscA | -0.9 | -1.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4613 | dinQ | -0.9 | -1.9 | Damage inducible, function unknown (RefSeq) | compare |
| b1175 | minD | -0.9 | -4.1 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0741 | pal | -0.9 | -2.9 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3169 | nusA | -0.9 | -2.7 | transcription elongation factor NusA (NCBI) | compare |
| b1804 | rnd | -0.9 | -3.7 | ribonuclease D (NCBI) | compare |
| b3281 | aroE | -0.9 | -6.9 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b2498 | upp | -0.9 | -2.3 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3163 | nlpI | -0.9 | -3.0 | hypothetical protein (NCBI) | compare |
| b0726 | sucA | -0.9 | -2.3 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3017 | sufI | -0.9 | -6.0 | repressor protein for FtsI (NCBI) | compare |
| b3465 | yhhF | -0.9 | -4.3 | predicted methyltransferase (NCBI) | compare |
| b1739 | osmE | -0.9 | -1.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b2892 | recJ | -0.8 | -6.0 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b1593 | b1593 | -0.8 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b4172 | hfq | -0.8 | -0.5 | RNA-binding protein Hfq (NCBI) | compare |
| b2393 | nupC | -0.8 | -3.9 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b3205 | yhbJ | -0.8 | -3.0 | hypothetical protein (NCBI) | compare |
| b1353 | sieB | -0.8 | -3.4 | phage superinfection exclusion protein (VIMSS) | compare |
| b4202 | rpsR | -0.8 | -1.2 | 30S ribosomal protein S18 (NCBI) | compare |
| b4481 | rffT | -0.8 | -4.2 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3868 | glnG | -0.8 | -3.4 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b3210 | arcB | -0.8 | -4.6 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b1025 | ycdT | -0.7 | -1.1 | predicted diguanylate cyclase (NCBI) | compare |
| b0251 | yafY | -0.7 | -2.7 | CP4-6 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0149 | mrcB | -0.7 | -5.9 | penicillin-binding protein 1b (NCBI) | compare |
| b1183 | umuD | -0.7 | -2.0 | DNA polymerase V, subunit D (NCBI) | compare |
| b0429 | cyoD | -0.7 | -3.4 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b3484 | yhhI | -0.7 | -2.1 | predicted transposase (NCBI) | compare |
| b3728 | pstS | -0.7 | -2.2 | phosphate transporter subunit (NCBI) | compare |
| b1573 | ydfC | -0.7 | -1.1 | Qin prophage; predicted protein (RefSeq) | compare |
| b3198 | kdsC | -0.7 | -1.7 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3237 | argR | -0.7 | -2.4 | arginine repressor (NCBI) | compare |
| b2906 | visC | -0.7 | -4.1 | hypothetical protein (NCBI) | compare |
| b0740 | tolB | -0.7 | -2.8 | translocation protein TolB precursor (NCBI) | compare |
| b3933 | ftsN | -0.7 | -4.6 | essential cell division protein (NCBI) | compare |
| b0143 | pcnB | -0.7 | -2.9 | poly(A) polymerase I (VIMSS) | compare |
| b1651 | gloA | -0.7 | -2.6 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b3426 | glpD | -0.7 | -2.2 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1613 | manA | -0.7 | -1.4 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2038 | rfbC | -0.7 | -3.8 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b2820 | recB | -0.7 | -0.5 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2156 | lysP | -0.7 | -4.9 | lysine transporter (NCBI) | compare |
| b4592 | yccB | -0.7 | -1.2 | hypothetical protein (RefSeq) | compare |
| b3786 | rffE | -0.7 | -5.0 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3791 | rffA | -0.7 | -4.1 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0082 | mraW | -0.7 | -2.4 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3813 | uvrD | -0.7 | -5.2 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b2282 | nuoH | -0.7 | -1.8 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2114 | metG | -0.7 | -1.7 | methionyl-tRNA synthetase (NCBI) | compare |
| b0990 | cspG | -0.7 | -0.6 | DNA-binding transcriptional regulator (NCBI) | compare |
| b0989 | cspH | -0.7 | -1.7 | stress protein, member of the CspA-family (NCBI) | compare |
| b3289 | rsmB | -0.7 | -4.7 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | compare |
| b1161 | ycgX | -0.7 | -0.7 | hypothetical protein (NCBI) | compare |
| b1129 | phoQ | -0.7 | -0.8 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b3414 | gntY | -0.7 | -3.5 | predicted gluconate transport associated protein (NCBI) | compare |
| b2937 | speB | -0.6 | -3.4 | agmatinase (NCBI) | compare |
| b1693 | aroD | -0.6 | -2.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1865 | nudB | -0.6 | -1.0 | dATP pyrophosphohydrolase (NCBI) | compare |
| b3026 | qseC | -0.6 | -2.5 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4494 | arpB | -0.6 | -1.2 | no description | compare |
| b0469 | apt | -0.6 | -3.5 | adenine phosphoribosyltransferase (NCBI) | compare |
| b4504 | ykfH | -0.6 | -2.7 | hypothetical protein (NCBI) | compare |
| b4383 | deoB | -0.6 | -4.4 | phosphopentomutase (NCBI) | compare |
| b0564 | appY | -0.6 | -0.9 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b4585 | sroB | -0.6 | -0.9 | Novel sRNA, function unknown (RefSeq) | compare |
| b1676 | pykF | -0.6 | -1.9 | pyruvate kinase (NCBI) | compare |
| b4042 | dgkA | -0.6 | -1.2 | diacylglycerol kinase (NCBI) | compare |
| b3387 | dam | -0.6 | -4.8 | DNA adenine methylase (NCBI) | compare |
| b3803 | hemX | -0.6 | -4.0 | predicted uroporphyrinogen III methylase (NCBI) | compare |
| b3146 | yraL | -0.6 | -3.8 | predicted methyltransferase (NCBI) | compare |
| b1176 | minC | -0.6 | -2.0 | septum formation inhibitor (NCBI) | compare |
| b2900 | yqfB | -0.6 | -2.7 | hypothetical protein (NCBI) | compare |
| b1551 | b1551 | -0.6 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b0161 | degP | -0.6 | -3.1 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b3181 | greA | -0.6 | -2.6 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b1671 | ydhX | -0.6 | -1.4 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b0535 | fimZ | -0.6 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1506 | yneL | -0.6 | -0.9 | predicted transcriptional regulator (NCBI) | compare |
| b4413 | sokC | -0.6 | -1.2 | regulatory antisense RNA (NCBI) | compare |
| b0976 | hyaE | -0.6 | -2.0 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b2319 | usg | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |
| b2058 | wcaB | -0.6 | -0.8 | predicted acyl transferase (NCBI) | compare |
| b2954 | yggV | -0.6 | -2.5 | putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI) | compare |
| b1103 | ycfF | -0.6 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b4384 | deoD | -0.6 | -3.9 | purine nucleoside phosphorylase (NCBI) | compare |
| b2143 | cdd | -0.6 | -2.6 | cytidine deaminase (NCBI) | compare |
| b1862 | yebB | -0.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0407 | yajC | -0.5 | -1.3 | preprotein translocase subunit YajC (NCBI) | compare |
| b1754 | b1754 | -0.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2512 | yfgL | -0.5 | -2.7 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b2934 | cmtB | -0.5 | -0.5 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b2435 | amiA | -0.5 | -3.0 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b0522 | purK | -0.5 | -3.5 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b3443 | yrhA | -0.5 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b0841 | ybjG | -0.5 | -2.8 | undecaprenyl pyrophosphate phosphatase (NCBI) | compare |
| b2236 | yfaE | -0.5 | -2.0 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b3858 | yihD | -0.5 | -1.5 | hypothetical protein (NCBI) | compare |
| b3870 | glnA | -0.5 | -1.8 | glutamine synthetase (NCBI) | compare |
| b1346 | ydaQ | -0.5 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b3650 | spoT | -0.5 | -2.5 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b0737 | tolQ | -0.5 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |