Experiment set19IT076 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_21570 -11.1 -5.4 flagellar basal body rod protein FlgB compare
PS417_19730 -9.3 -4.0 flagellar biosynthesis protein FliR compare
PS417_01575 -9.3 -3.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_21565 -9.2 -5.1 flagellar basal body rod protein FlgC compare
PS417_05635 -9.0 -6.2 membrane protein compare
PS417_19765 -9.0 -10.7 flagellar hook-length control protein compare
PS417_21595 -8.9 -4.2 flagellar biosynthesis protein FlgN compare
PS417_19725 -8.8 -5.4 flagellar biosynthesis protein FlhB compare
PS417_21585 -8.5 -10.1 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_19695 -8.3 -8.7 flagellar biosynthesis sigma factor compare
PS417_19795 -8.3 -9.7 flagellar assembly protein FliH compare
PS417_19785 -8.1 -3.7 flagellar biogenesis protein compare
PS417_19860 -7.7 -13.0 flagellar hook protein FlgL compare
PS417_19880 -7.7 -11.8 flagellar basal body L-ring protein compare
PS417_19660 -7.6 -6.1 cobalamin biosynthesis protein CobQ compare
PS417_04415 -7.5 -7.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_17565 -7.3 -3.1 branched-chain amino acid aminotransferase compare
PS417_19755 -7.2 -1.8 flagellar motor switch protein FliM compare
PS417_19740 -7.2 -7.6 flagellar biosynthesis protein flip compare
PS417_25725 -7.1 -17.2 anthranilate synthase component I compare
PS417_19825 -7.0 -14.6 ATPase AAA compare
PS417_26740 -7.0 -9.3 homoserine acetyltransferase compare
PS417_19745 -6.9 -5.7 flagellar assembly protein FliO compare
PS417_02510 -6.9 -6.1 ATP phosphoribosyltransferase regulatory subunit compare
PS417_19650 -6.8 -4.3 chemotaxis protein CheW compare
PS417_19705 -6.7 -3.3 flagellar biosynthesis regulator FlhF compare
PS417_25715 -6.7 -4.7 anthranilate phosphoribosyltransferase compare
PS417_01855 -6.7 -2.8 phosphoribosyl-AMP cyclohydrolase compare
PS417_18595 -6.7 -4.3 3-isopropylmalate dehydratase compare
PS417_19655 -6.7 -3.8 chemotaxis protein CheW compare
PS417_23800 -6.7 -9.2 ketol-acid reductoisomerase compare
PS417_23950 -6.6 -2.8 polynucleotide phosphorylase/polyadenylase compare
PS417_19800 -6.6 -2.3 flagellar motor switch protein FliG compare
PS417_27040 -6.3 -2.5 3-phosphoglycerate dehydrogenase compare
PS417_19710 -6.2 -14.1 flagellar biosynthesis protein FlhA compare
PS417_00185 -6.1 -3.9 tryptophan synthase subunit beta compare
PS417_19885 -6.1 -1.9 flagellar basal body rod protein FlgG compare
PS417_17550 -6.1 -4.2 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) compare
PS417_19850 -6.0 -11.1 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_25720 -6.0 -6.6 anthranilate synthase component II compare
PS417_19790 -6.0 -4.0 ATP synthase compare
PS417_19840 -6.0 -11.8 flagellar cap protein FliD compare
PS417_23810 -5.8 -12.2 acetolactate synthase 3 catalytic subunit compare
PS417_03165 -5.8 -4.9 hypothetical protein compare
PS417_01640 -5.7 -4.2 histidine kinase compare
PS417_18560 -5.7 -8.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_19865 -5.7 -10.2 flagellar hook protein FlgK compare
PS417_04420 -5.7 -9.7 histidinol dehydrogenase compare
PS417_23545 -5.7 -2.8 gamma-glutamyl kinase compare
PS417_21555 -5.5 -9.8 flagellar hook protein FlgE compare
PS417_28220 -5.4 -2.9 LysR family transcriptional regulator compare
PS417_19675 -5.4 -6.0 chemotaxis protein CheY compare
PS417_18530 -5.3 -4.8 O-succinylhomoserine sulfhydrylase compare
PS417_27835 -5.1 -7.1 endoribonuclease compare
PS417_19735 -5.0 -4.9 flagellar biosynthesis protein FliQ compare
PS417_19690 -5.0 -2.9 histidine kinase compare
PS417_05595 -4.9 -9.7 ornithine carbamoyltransferase compare
PS417_01565 -4.9 -3.0 imidazole glycerol phosphate synthase compare
PS417_18600 -4.8 -3.2 isopropylmalate isomerase compare
PS417_15495 -4.7 -1.8 FAD-dependent oxidoreductase compare
PS417_14940 -4.7 -1.7 LysR family transcriptional regulator compare
PS417_24745 -4.7 -2.4 gamma-glutamyl phosphate reductase compare
PS417_19835 -4.6 -1.6 flagellar biosynthesis protein FliS compare
PS417_21390 -4.6 -4.9 hypothetical protein compare
PS417_06845 -4.5 -1.6 lipoprotein compare
PS417_26890 -4.5 -6.3 dihydroxy-acid dehydratase compare
PS417_18585 -4.5 -4.9 3-isopropylmalate dehydrogenase compare
PS417_17545 -4.5 -4.2 2-oxoisovalerate dehydrogenase compare
PS417_19805 -4.5 -4.3 flagellar M-ring protein FliF compare
PS417_01635 -4.4 -6.2 nitrogen regulation protein NR(I) compare
PS417_01955 -4.4 -9.3 peptidase compare
PS417_19665 -4.4 -3.6 flagellar motor protein MotD compare
PS417_01560 -4.3 -3.3 imidazoleglycerol-phosphate dehydratase compare
PS417_27795 -4.3 -1.1 orotate phosphoribosyltransferase compare
PS417_01850 -4.3 -3.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_21575 -4.3 -3.8 chemotaxis protein compare
PS417_02415 -4.2 -6.1 phosphoserine phosphatase compare
PS417_23995 -4.1 -1.0 preprotein translocase subunit SecG compare
PS417_06200 -4.1 -7.3 protein-PII uridylyltransferase compare
PS417_18540 -4.1 -2.9 colicin V production CvpA compare
PS417_17560 -4.1 -4.5 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) compare
PS417_22520 -4.0 -1.9 histidine kinase compare
PS417_06375 -4.0 -1.0 deoxycytidine triphosphate deaminase compare
PS417_21630 -4.0 -2.6 magnesium transporter compare
PS417_01915 -4.0 -1.0 ATP-dependent protease ATP-binding subunit HslU compare
PS417_08540 -3.9 -2.2 RNA helicase compare
PS417_20105 -3.8 -18.0 glycosyl transferase compare
PS417_21480 -3.8 -1.5 23S rRNA pseudouridylate synthase compare
PS417_26745 -3.7 -3.3 methionine biosynthesis protein MetW compare
PS417_27195 -3.6 -1.2 N-acetylglutamate synthase compare
PS417_22450 -3.4 -1.4 ATP-dependent DNA helicase RuvA compare
PS417_01605 -3.3 -1.6 phosphoglycerate mutase compare
PS417_04080 -3.3 -2.9 peptide ABC transporter substrate-binding protein compare
PS417_00385 -3.3 -1.2 Fur family transcriptional regulator compare
PS417_12855 -3.2 -4.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_26605 -3.2 -1.1 malonate decarboxylase subunit beta compare
PS417_00180 -3.2 -2.3 tryptophan synthase subunit alpha compare
PS417_21070 -3.2 -2.7 aconitate hydratase compare
PS417_18690 -3.1 -4.0 aromatic amino acid aminotransferase compare
PS417_19870 -3.0 -5.0 flagellar rod assembly protein FlgJ compare
PS417_06540 -2.9 -2.0 membrane protein compare
PS417_20610 -2.9 -1.2 hypothetical protein compare
PS417_24370 -2.8 -1.0 (2Fe-2S)-binding protein compare
PS417_19820 -2.8 -5.1 histidine kinase compare
PS417_21430 -2.8 -2.6 3-oxoacyl-ACP synthase compare
PS417_23025 -2.8 -6.8 murein transglycosylase compare
PS417_20160 -2.8 -2.5 cysteine synthase compare
PS417_21125 -2.8 -5.9 phosphoadenosine phosphosulfate reductase compare
PS417_02210 -2.7 -5.9 diguanylate cyclase compare
PS417_23380 -2.7 -3.2 cytochrome o ubiquinol oxidase subunit III compare
PS417_08580 -2.7 -5.7 histidine kinase compare
PS417_07620 -2.7 -1.8 beta-hexosaminidase compare
PS417_08125 -2.7 -0.6 prephenate dehydratase compare
PS417_04650 -2.6 -0.9 D-alanine--D-alanine ligase compare
PS417_08155 -2.6 -1.5 integration host factor subunit beta compare
PS417_23770 -2.6 -1.4 exodeoxyribonuclease V subunit alpha compare
PS417_10405 -2.6 -1.1 filamentous hemagglutinin compare
PS417_23805 -2.6 -3.9 acetolactate synthase 3 regulatory subunit compare
PS417_08205 -2.6 -2.3 acetyltransferase compare
PS417_09725 -2.5 -7.6 transporter compare
PS417_26730 -2.5 -0.9 pyrroline-5-carboxylate reductase compare
PS417_15935 -2.5 -2.6 Rrf2 family transcriptional regulator compare
PS417_25710 -2.5 -1.5 indole-3-glycerol-phosphate synthase compare
PS417_02475 -2.5 -2.6 N-acetylmuramoyl-L-alanine amidase compare
PS417_19645 -2.4 -2.9 chemotaxis protein compare
PS417_23110 -2.4 -3.9 2-isopropylmalate synthase compare
PS417_02485 -2.3 -3.1 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_27010 -2.3 -7.6 threonine dehydratase compare
PS417_22445 -2.3 -4.0 ATP-dependent DNA helicase RuvB compare
PS417_13510 -2.3 -1.0 polyketide cyclase compare
PS417_18570 -2.3 -3.0 peptidoglycan-binding protein compare
PS417_27210 -2.3 -4.6 AsnC family transcriptional regulator compare
PS417_22060 -2.2 -1.3 hypothetical protein compare
PS417_13165 -2.2 -2.8 peroxidase compare
PS417_18055 -2.2 -1.3 general secretion pathway protein GspK compare
PS417_21065 -2.2 -2.1 3-methylitaconate isomerase compare
PS417_27815 -2.2 -1.7 hypothetical protein compare
PS417_16510 -2.2 -3.0 Clp protease ClpX compare
PS417_23370 -2.2 -3.6 protoheme IX farnesyltransferase compare
PS417_20095 -2.1 -8.0 hypothetical protein compare
PS417_02000 -2.1 -8.8 glutamate synthase compare
PS417_06355 -2.1 -3.1 protein-L-isoaspartate O-methyltransferase compare
PS417_16490 -2.1 -1.4 cell division protein FtsK compare
PS417_10145 -2.1 -1.5 hypothetical protein compare
PS417_23775 -2.1 -1.9 exodeoxyribonuclease V subunit beta compare
PS417_08200 -2.1 -2.9 hypothetical protein compare
PS417_20090 -2.0 -5.9 DegT/DnrJ/EryC1/StrS aminotransferase compare
PS417_19630 -2.0 -2.9 LuxR family transcriptional regulator compare
PS417_24710 -2.0 -5.4 lipoprotein compare
PS417_12290 -2.0 -4.5 sulfite reductase compare
PS417_20985 -2.0 -1.7 porin compare
PS417_08620 -1.9 -1.0 hypothetical protein compare
PS417_27215 -1.9 -3.2 hypothetical protein compare
PS417_24135 -1.9 -1.9 hypothetical protein compare
PS417_18310 -1.9 -1.6 hypothetical protein compare
PS417_19685 -1.9 -5.4 protein phosphatase compare
PS417_28450 -1.9 -1.6 XRE family transcriptional regulator compare
PS417_21560 -1.8 -1.8 flagellar basal body rod modification protein FlgD compare
PS417_08190 -1.8 -7.7 membrane protein compare
PS417_01580 -1.8 -1.4 imidazole glycerol phosphate synthase compare
PS417_16465 -1.8 -5.0 sirohydrochlorin ferrochelatase compare
PS417_01995 -1.8 -2.2 hypothetical protein compare
PS417_27800 -1.8 -2.8 exodeoxyribonuclease III compare
PS417_13835 -1.8 -5.1 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) compare
PS417_22620 -1.8 -2.6 pyruvate kinase compare
PS417_17780 -1.8 -1.2 Ais protein compare
PS417_08245 -1.8 -0.9 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_22175 -1.8 -1.6 amino acid transporter LysE compare
PS417_04595 -1.8 -1.9 cell division protein MraZ compare
PS417_01620 -1.7 -2.5 preprotein translocase subunit SecB compare
PS417_02435 -1.7 -3.2 flagellar motor protein MotA compare
PS417_20650 -1.7 -5.6 hypothetical protein compare
PS417_15105 -1.7 -4.4 membrane protein compare
PS417_01570 -1.7 -1.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_15285 -1.7 -0.9 type VI secretion protein compare
PS417_03000 -1.7 -1.8 translation initiation factor Sui1 compare
PS417_25650 -1.7 -3.7 anhydro-N-acetylmuramic acid kinase compare
PS417_02005 -1.7 -6.8 glutamate synthase compare
PS417_15095 -1.7 -2.4 hypothetical protein compare
PS417_19600 -1.6 -0.9 exonuclease compare
PS417_07870 -1.6 -2.2 hypothetical protein compare
PS417_03830 -1.6 -6.9 protein disaggregation chaperone compare
PS417_10390 -1.6 -1.9 RNA polymerase subunit sigma24 compare
PS417_04115 -1.6 -3.5 alpha/beta hydrolase compare
PS417_20170 -1.6 -2.2 hypothetical protein compare
PS417_20855 -1.6 -1.0 hypothetical protein compare
PS417_27865 -1.6 -2.1 LysR family transcriptional regulator compare
PS417_27640 -1.6 -0.9 TetR family transcriptional regulator compare
PS417_26995 -1.6 -5.5 phosphoserine phosphatase compare
PS417_22565 -1.5 -0.7 formyltetrahydrofolate deformylase compare
PS417_04375 -1.5 -1.9 ABC transporter ATP-binding protein compare
PS417_27615 -1.5 -5.6 ammonia channel protein compare
PS417_13840 -1.5 -3.0 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) compare
PS417_19760 -1.5 -2.9 flagellar basal body protein FliL compare
PS417_02950 -1.5 -1.9 tRNA-dihydrouridine synthase B compare
PS417_20960 -1.5 -5.8 Nitrate-binding regulatory protein (nasS) (from data) compare
PS417_09705 -1.5 -3.3 hypothetical protein compare
PS417_12665 -1.5 -4.9 hypothetical protein compare
PS417_14065 -1.5 -4.9 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_05985 -1.5 -1.7 chemotaxis protein CheY compare


Specific Phenotypes

For 6 genes in this experiment