Experiment set19IT058 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_19745 -11.5 -4.9 flagellar assembly protein FliO compare
PS417_21570 -11.2 -5.0 flagellar basal body rod protein FlgB compare
PS417_01575 -9.4 -3.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_21565 -9.3 -4.7 flagellar basal body rod protein FlgC compare
PS417_19730 -9.3 -3.7 flagellar biosynthesis protein FliR compare
PS417_19880 -9.3 -6.4 flagellar basal body L-ring protein compare
PS417_21595 -9.0 -3.9 flagellar biosynthesis protein FlgN compare
PS417_19725 -8.8 -5.0 flagellar biosynthesis protein FlhB compare
PS417_18595 -8.3 -3.7 3-isopropylmalate dehydratase compare
PS417_01635 -8.2 -6.0 nitrogen regulation protein NR(I) compare
PS417_18540 -8.2 -4.1 colicin V production CvpA compare
PS417_19795 -8.2 -7.8 flagellar assembly protein FliH compare
PS417_18600 -8.1 -3.2 isopropylmalate isomerase compare
PS417_19785 -8.1 -3.4 flagellar biogenesis protein compare
PS417_21575 -8.0 -5.2 chemotaxis protein compare
PS417_05635 -8.0 -6.7 membrane protein compare
PS417_19870 -8.0 -3.9 flagellar rod assembly protein FlgJ compare
PS417_04415 -7.9 -5.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_25720 -7.9 -7.7 anthranilate synthase component II compare
PS417_27835 -7.7 -5.5 endoribonuclease compare
PS417_19850 -7.6 -5.3 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_26740 -7.6 -7.4 homoserine acetyltransferase compare
PS417_19710 -7.6 -15.2 flagellar biosynthesis protein FlhA compare
PS417_23805 -7.5 -4.4 acetolactate synthase 3 regulatory subunit compare
PS417_25725 -7.5 -12.5 anthranilate synthase component I compare
PS417_19860 -7.4 -16.6 flagellar hook protein FlgL compare
PS417_19740 -7.4 -7.3 flagellar biosynthesis protein flip compare
PS417_21585 -7.4 -6.6 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_19755 -7.3 -1.7 flagellar motor switch protein FliM compare
PS417_19765 -7.2 -9.3 flagellar hook-length control protein compare
PS417_23800 -7.2 -5.0 ketol-acid reductoisomerase compare
PS417_19790 -7.0 -3.9 ATP synthase compare
PS417_19665 -7.0 -3.9 flagellar motor protein MotD compare
PS417_18585 -6.9 -4.8 3-isopropylmalate dehydrogenase compare
PS417_02510 -6.9 -5.7 ATP phosphoribosyltransferase regulatory subunit compare
PS417_19650 -6.9 -4.0 chemotaxis protein CheW compare
PS417_01855 -6.8 -2.6 phosphoribosyl-AMP cyclohydrolase compare
PS417_19660 -6.8 -5.1 cobalamin biosynthesis protein CobQ compare
PS417_19705 -6.8 -3.0 flagellar biosynthesis regulator FlhF compare
PS417_19695 -6.7 -6.4 flagellar biosynthesis sigma factor compare
PS417_23950 -6.6 -2.6 polynucleotide phosphorylase/polyadenylase compare
PS417_04420 -6.5 -11.0 histidinol dehydrogenase compare
PS417_19825 -6.4 -9.2 ATPase AAA compare
PS417_19840 -6.4 -12.2 flagellar cap protein FliD compare
PS417_01640 -6.4 -3.8 histidine kinase compare
PS417_27040 -6.3 -2.4 3-phosphoglycerate dehydrogenase compare
PS417_26995 -6.3 -7.5 phosphoserine phosphatase compare
PS417_20105 -6.3 -23.2 glycosyl transferase compare
PS417_02280 -6.3 -2.4 GlcNAc-PI de-N-acetylase compare
PS417_19885 -6.1 -1.8 flagellar basal body rod protein FlgG compare
PS417_21390 -6.1 -5.5 hypothetical protein compare
PS417_27870 -5.9 -3.5 ATP-dependent DNA helicase RecG compare
PS417_18560 -5.9 -5.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_01570 -5.8 -2.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_19805 -5.8 -3.2 flagellar M-ring protein FliF compare
PS417_20160 -5.7 -4.5 cysteine synthase compare
PS417_12855 -5.6 -3.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19865 -5.6 -7.4 flagellar hook protein FlgK compare
PS417_08230 -5.5 -2.2 lipopolysaccharide biosynthesis protein RfbH compare
PS417_21555 -5.5 -9.1 flagellar hook protein FlgE compare
PS417_19690 -5.4 -3.7 histidine kinase compare
PS417_00185 -5.4 -4.5 tryptophan synthase subunit beta compare
PS417_23810 -5.4 -9.7 acetolactate synthase 3 catalytic subunit compare
PS417_21510 -5.4 -2.4 histidine kinase compare
PS417_02415 -5.3 -4.5 phosphoserine phosphatase compare
PS417_01850 -5.2 -4.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_24710 -5.1 -4.9 lipoprotein compare
PS417_05595 -5.1 -6.9 ornithine carbamoyltransferase compare
PS417_19655 -5.1 -3.4 chemotaxis protein CheW compare
PS417_08245 -5.0 -1.1 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_01565 -5.0 -2.6 imidazole glycerol phosphate synthase compare
PS417_20635 -5.0 -1.1 ABC transporter ATP-binding protein compare
PS417_25715 -5.0 -5.1 anthranilate phosphoribosyltransferase compare
PS417_02720 -4.9 -1.1 TetR family transcriptional regulator compare
PS417_23375 -4.9 -1.6 cytochrome C oxidase compare
PS417_14065 -4.9 -10.0 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_22565 -4.8 -1.1 formyltetrahydrofolate deformylase compare
PS417_19800 -4.7 -2.5 flagellar motor switch protein FliG compare
PS417_19835 -4.7 -1.5 flagellar biosynthesis protein FliS compare
PS417_01955 -4.6 -9.8 peptidase compare
PS417_05975 -4.6 -1.0 chemotaxis protein CheW compare
PS417_20650 -4.6 -10.7 hypothetical protein compare
PS417_27245 -4.5 -4.9 aminotransferase DegT compare
PS417_21125 -4.5 -8.1 phosphoadenosine phosphosulfate reductase compare
PS417_06200 -4.5 -7.4 protein-PII uridylyltransferase compare
PS417_08220 -4.4 -1.0 epimerase compare
PS417_27300 -4.4 -1.0 cell division protein ZapA compare
PS417_27795 -4.4 -1.0 orotate phosphoribosyltransferase compare
PS417_08200 -4.4 -2.6 hypothetical protein compare
PS417_26240 -4.4 -2.5 N-methylproline demethylase compare
PS417_21035 -4.3 -9.1 multidrug transporter compare
PS417_25710 -4.3 -1.4 indole-3-glycerol-phosphate synthase compare
PS417_26890 -4.2 -4.7 dihydroxy-acid dehydratase compare
PS417_23995 -4.2 -0.9 preprotein translocase subunit SecG compare
PS417_23110 -4.1 -5.6 2-isopropylmalate synthase compare
PS417_18690 -4.1 -4.3 aromatic amino acid aminotransferase compare
PS417_24705 -4.1 -3.1 D-alanyl-D-alanine carboxypeptidase compare
PS417_01915 -4.1 -0.9 ATP-dependent protease ATP-binding subunit HslU compare
PS417_02210 -4.0 -4.8 diguanylate cyclase compare
PS417_06375 -4.0 -0.9 deoxycytidine triphosphate deaminase compare
PS417_20095 -4.0 -10.8 hypothetical protein compare
PS417_19735 -4.0 -2.6 flagellar biosynthesis protein FliQ compare
PS417_08135 -4.0 -4.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_01580 -3.9 -1.2 imidazole glycerol phosphate synthase compare
PS417_08170 -3.8 -11.3 capsular biosynthesis protein compare
PS417_20985 -3.8 -2.1 porin compare
PS417_21480 -3.8 -1.4 23S rRNA pseudouridylate synthase compare
PS417_19820 -3.8 -4.2 histidine kinase compare
PS417_26745 -3.8 -4.4 methionine biosynthesis protein MetW compare
PS417_03165 -3.7 -4.6 hypothetical protein compare
PS417_27195 -3.7 -1.2 N-acetylglutamate synthase compare
PS417_20855 -3.6 -1.1 hypothetical protein compare
PS417_00045 -3.6 -1.8 glycerol acyltransferase compare
PS417_18530 -3.5 -4.1 O-succinylhomoserine sulfhydrylase compare
PS417_08225 -3.5 -4.4 acetolactate synthase compare
PS417_19645 -3.5 -3.1 chemotaxis protein compare
PS417_19830 -3.5 -1.7 flagellar assembly protein FliT compare
PS417_22450 -3.5 -1.3 ATP-dependent DNA helicase RuvA compare
PS417_01605 -3.4 -1.5 phosphoglycerate mutase compare
PS417_08205 -3.4 -4.0 acetyltransferase compare
PS417_19675 -3.4 -3.3 chemotaxis protein CheY compare
PS417_03260 -3.4 -1.0 5S ribosomal RNA compare
PS417_22445 -3.4 -2.4 ATP-dependent DNA helicase RuvB compare
PS417_24615 -3.3 -1.0 hypothetical protein compare
PS417_27585 -3.3 -2.3 diaminopimelate epimerase compare
PS417_26605 -3.3 -1.0 malonate decarboxylase subunit beta compare
PS417_12650 -3.3 -3.4 magnesium transporter compare
PS417_05815 -3.3 -5.7 recombinase RecA compare
PS417_21430 -3.2 -2.4 3-oxoacyl-ACP synthase compare
PS417_12290 -3.2 -6.2 sulfite reductase compare
PS417_14940 -3.2 -1.6 LysR family transcriptional regulator compare
PS417_10720 -3.2 -5.7 chemotaxis protein CheY compare
PS417_08195 -3.2 -7.3 hypothetical protein compare
PS417_23025 -3.2 -7.1 murein transglycosylase compare
PS417_27435 -3.1 -5.9 polyphosphate kinase compare
PS417_24835 -3.1 -3.0 hypothetical protein compare
PS417_26695 -3.1 -0.9 uracil phosphoribosyltransferase compare
PS417_01710 -3.0 -4.4 histidine utilization repressor compare
PS417_02665 -3.0 -10.6 branched-chain amino acid ABC transporter permease compare
PS417_07170 -3.0 -4.1 hypothetical protein compare
PS417_23380 -2.9 -2.9 cytochrome o ubiquinol oxidase subunit III compare
PS417_20090 -2.9 -5.8 DegT/DnrJ/EryC1/StrS aminotransferase compare
PS417_27010 -2.9 -7.2 threonine dehydratase compare
PS417_17645 -2.8 -1.7 RND transporter compare
PS417_04585 -2.8 -1.9 hypothetical protein compare
PS417_17215 -2.8 -2.9 peptidylprolyl isomerase compare
PS417_08335 -2.8 -1.8 hypothetical protein compare
PS417_09695 -2.8 -2.2 hydrolase compare
PS417_02005 -2.8 -7.0 glutamate synthase compare
PS417_24935 -2.8 -1.1 hypothetical protein compare
PS417_02175 -2.8 -2.8 transcriptional regulator compare
PS417_09085 -2.8 -1.1 hypothetical protein compare
PS417_08190 -2.7 -7.3 membrane protein compare
PS417_01560 -2.7 -2.4 imidazoleglycerol-phosphate dehydratase compare
PS417_01990 -2.7 -4.8 cell division protein compare
PS417_04650 -2.7 -0.8 D-alanine--D-alanine ligase compare
PS417_16490 -2.6 -1.4 cell division protein FtsK compare
PS417_26730 -2.6 -0.8 pyrroline-5-carboxylate reductase compare
PS417_09725 -2.6 -5.5 transporter compare
PS417_26990 -2.6 -0.8 RNA pyrophosphohydrolase compare
PS417_15085 -2.6 -6.0 ATPase AAA compare
PS417_02660 -2.6 -9.8 branched-chain amino acid transporter permease subunit LivH compare
PS417_01920 -2.6 -0.8 ATP-dependent protease subunit HslV compare
PS417_25390 -2.6 -4.1 MFS transporter compare
PS417_23900 -2.6 -6.9 poly(A) polymerase compare
PS417_08185 -2.6 -3.8 glycosyl transferase compare
PS417_18590 -2.5 -2.3 SAM-dependent methyltransferase compare
PS417_20775 -2.5 -4.4 coproporphyrinogen III oxidase compare
PS417_17240 -2.5 -2.3 trigger factor compare
PS417_27800 -2.5 -3.0 exodeoxyribonuclease III compare
PS417_19760 -2.5 -3.6 flagellar basal body protein FliL compare
PS417_23775 -2.5 -2.2 exodeoxyribonuclease V subunit beta compare
PS417_02655 -2.5 -7.5 amino acid ABC transporter substrate-binding protein compare
PS417_25645 -2.4 -4.2 peptidase M23 compare
PS417_21560 -2.4 -2.3 flagellar basal body rod modification protein FlgD compare
PS417_19630 -2.4 -1.6 LuxR family transcriptional regulator compare
PS417_24840 -2.4 -1.6 hypothetical protein compare
PS417_02180 -2.4 -4.8 proline:sodium symporter PutP compare
PS417_04385 -2.4 -4.1 organic solvent ABC transporter substrate-binding protein compare
PS417_16370 -2.3 -5.3 chemotaxis protein CheY compare
PS417_24525 -2.3 -2.2 nuclease compare
PS417_07470 -2.3 -1.5 hypothetical protein compare
PS417_07575 -2.3 -3.4 multifunctional fatty acid oxidation complex subunit alpha compare
PS417_06680 -2.3 -6.8 nuclease PIN compare
PS417_00160 -2.3 -3.0 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
PS417_15105 -2.3 -5.8 membrane protein compare
PS417_00370 -2.2 -1.0 hypothetical protein compare
PS417_22775 -2.2 -7.4 histidine kinase compare
PS417_16990 -2.2 -4.5 acyl-CoA dehydrogenase compare
PS417_26225 -2.1 -3.5 electron transfer flavoprotein subunit beta compare
PS417_19615 -2.1 -4.7 chemotaxis protein CheW compare
PS417_15770 -2.1 -1.2 pyridoxine 5'-phosphate oxidase compare
PS417_15495 -2.1 -1.0 FAD-dependent oxidoreductase compare
PS417_20610 -2.1 -0.9 hypothetical protein compare
PS417_23105 -2.1 -1.4 hypothetical protein compare
PS417_08540 -2.1 -1.9 RNA helicase compare
PS417_02435 -2.1 -3.4 flagellar motor protein MotA compare
PS417_02670 -2.0 -2.6 ABC transporter compare
PS417_20660 -2.0 -4.8 hypothetical protein compare
PS417_02555 -2.0 -8.7 exoribonuclease R compare


Specific Phenotypes

For 9 genes in this experiment