Experiment set19IT047 for Pseudomonas simiae WCS417

Compare to:

Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_23545 -5.8 -3.7 gamma-glutamyl kinase compare
PS417_21575 -4.9 -8.7 chemotaxis protein compare
PS417_24745 -4.8 -3.1 gamma-glutamyl phosphate reductase compare
PS417_00185 -4.7 -5.6 tryptophan synthase subunit beta compare
PS417_19650 -4.7 -5.6 chemotaxis protein CheW compare
PS417_27795 -4.3 -1.4 orotate phosphoribosyltransferase compare
PS417_20985 -4.0 -2.7 porin compare
PS417_01915 -4.0 -1.3 ATP-dependent protease ATP-binding subunit HslU compare
PS417_01855 -4.0 -3.3 phosphoribosyl-AMP cyclohydrolase compare
PS417_02280 -3.9 -2.7 GlcNAc-PI de-N-acetylase compare
PS417_02415 -3.9 -6.8 phosphoserine phosphatase compare
PS417_09725 -3.9 -11.3 transporter compare
PS417_01580 -3.8 -1.6 imidazole glycerol phosphate synthase compare
PS417_23810 -3.7 -9.9 acetolactate synthase 3 catalytic subunit compare
PS417_04415 -3.6 -7.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_25725 -3.5 -16.4 anthranilate synthase component I compare
PS417_18585 -3.4 -5.8 3-isopropylmalate dehydrogenase compare
PS417_01605 -3.4 -2.2 phosphoglycerate mutase compare
PS417_25905 -3.3 -3.7 AsnC family transcriptional regulator compare
PS417_19675 -3.2 -6.2 chemotaxis protein CheY compare
PS417_18530 -3.2 -5.7 O-succinylhomoserine sulfhydrylase compare
PS417_23805 -3.1 -5.3 acetolactate synthase 3 regulatory subunit compare
PS417_18560 -3.1 -6.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_27040 -3.1 -3.8 3-phosphoglycerate dehydrogenase compare
PS417_21430 -3.1 -2.9 3-oxoacyl-ACP synthase compare
PS417_02000 -3.1 -13.1 glutamate synthase compare
PS417_25720 -3.1 -8.7 anthranilate synthase component II compare
PS417_27800 -3.0 -2.1 exodeoxyribonuclease III compare
PS417_08135 -2.9 -5.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_22565 -2.9 -1.3 formyltetrahydrofolate deformylase compare
PS417_02510 -2.9 -5.9 ATP phosphoribosyltransferase regulatory subunit compare
PS417_18595 -2.9 -4.3 3-isopropylmalate dehydratase compare
PS417_23770 -2.8 -1.9 exodeoxyribonuclease V subunit alpha compare
PS417_19755 -2.8 -2.9 flagellar motor switch protein FliM compare
PS417_27195 -2.8 -1.8 N-acetylglutamate synthase compare
PS417_08125 -2.8 -0.9 prephenate dehydratase compare
PS417_19690 -2.8 -4.1 histidine kinase compare
PS417_04420 -2.7 -9.1 histidinol dehydrogenase compare
PS417_19880 -2.7 -9.6 flagellar basal body L-ring protein compare
PS417_06680 -2.6 -9.2 nuclease PIN compare
PS417_23800 -2.6 -9.8 ketol-acid reductoisomerase compare
PS417_25715 -2.6 -4.8 anthranilate phosphoribosyltransferase compare
PS417_26730 -2.6 -1.2 pyrroline-5-carboxylate reductase compare
PS417_21035 -2.6 -10.4 multidrug transporter compare
PS417_25710 -2.6 -1.9 indole-3-glycerol-phosphate synthase compare
PS417_14940 -2.6 -2.4 LysR family transcriptional regulator compare
PS417_01850 -2.5 -4.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_27870 -2.5 -4.1 ATP-dependent DNA helicase RecG compare
PS417_19790 -2.5 -4.0 ATP synthase compare
PS417_22445 -2.5 -4.4 ATP-dependent DNA helicase RuvB compare
PS417_01565 -2.5 -7.0 imidazole glycerol phosphate synthase compare
PS417_19885 -2.4 -3.8 flagellar basal body rod protein FlgG compare
PS417_19835 -2.4 -1.8 flagellar biosynthesis protein FliS compare
PS417_23995 -2.4 -1.1 preprotein translocase subunit SecG compare
PS417_19860 -2.4 -14.1 flagellar hook protein FlgL compare
PS417_22450 -2.4 -1.8 ATP-dependent DNA helicase RuvA compare
PS417_24800 -2.4 -3.8 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PS417_06200 -2.3 -7.1 protein-PII uridylyltransferase compare
PS417_26740 -2.3 -7.5 homoserine acetyltransferase compare
PS417_18600 -2.3 -1.9 isopropylmalate isomerase compare
PS417_02005 -2.2 -8.6 glutamate synthase compare
PS417_26890 -2.2 -5.8 dihydroxy-acid dehydratase compare
PS417_19730 -2.2 -3.9 flagellar biosynthesis protein FliR compare
PS417_19785 -2.2 -5.5 flagellar biogenesis protein compare
PS417_19850 -2.2 -9.6 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_23950 -2.2 -2.3 polynucleotide phosphorylase/polyadenylase compare
PS417_04380 -2.2 -1.5 ABC transporter permease compare
PS417_06375 -2.2 -1.0 deoxycytidine triphosphate deaminase compare
PS417_19840 -2.2 -11.4 flagellar cap protein FliD compare
PS417_16490 -2.1 -1.2 cell division protein FtsK compare
PS417_01575 -2.1 -3.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_19710 -2.1 -12.2 flagellar biosynthesis protein FlhA compare
PS417_21570 -2.1 -10.0 flagellar basal body rod protein FlgB compare
PS417_23025 -2.1 -5.0 murein transglycosylase compare
PS417_19765 -2.1 -9.3 flagellar hook-length control protein compare
PS417_26745 -2.1 -4.1 methionine biosynthesis protein MetW compare
PS417_25915 -2.1 -3.6 carbon-nitrogen hydrolase compare
PS417_21480 -2.0 -1.9 23S rRNA pseudouridylate synthase compare
PS417_19655 -2.0 -5.2 chemotaxis protein CheW compare
PS417_18310 -2.0 -2.1 hypothetical protein compare
PS417_20705 -2.0 -4.4 cbb3-type cytochrome c oxidase subunit II compare
PS417_19695 -2.0 -8.3 flagellar biosynthesis sigma factor compare
PS417_19865 -2.0 -9.7 flagellar hook protein FlgK compare
PS417_21585 -2.0 -7.2 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_19870 -2.0 -3.9 flagellar rod assembly protein FlgJ compare
PS417_21595 -2.0 -4.2 flagellar biosynthesis protein FlgN compare
PS417_02975 -2.0 -2.5 3-dehydroquinate dehydratase compare
PS417_25910 -2.0 -6.5 amine oxidase compare
PS417_02555 -1.9 -10.1 exoribonuclease R compare
PS417_07615 -1.9 -4.9 TetR family transcriptional regulator compare
PS417_19795 -1.9 -12.1 flagellar assembly protein FliH compare
PS417_23110 -1.9 -5.4 2-isopropylmalate synthase compare
PS417_27835 -1.9 -7.4 endoribonuclease compare
PS417_19740 -1.9 -9.9 flagellar biosynthesis protein flip compare
PS417_05635 -1.9 -5.6 membrane protein compare
PS417_19660 -1.9 -5.5 cobalamin biosynthesis protein CobQ compare
PS417_10720 -1.8 -9.5 chemotaxis protein CheY compare
PS417_21565 -1.8 -4.9 flagellar basal body rod protein FlgC compare
PS417_04595 -1.8 -2.5 cell division protein MraZ compare
PS417_01920 -1.8 -1.0 ATP-dependent protease subunit HslV compare
PS417_07565 -1.8 -3.3 hypothetical protein compare
PS417_27865 -1.8 -2.1 LysR family transcriptional regulator compare
PS417_19735 -1.7 -5.2 flagellar biosynthesis protein FliQ compare
PS417_01635 -1.7 -6.9 nitrogen regulation protein NR(I) compare
PS417_26985 -1.7 -3.9 phosphoenolpyruvate-protein phosphotransferase compare
PS417_21555 -1.7 -10.4 flagellar hook protein FlgE compare
PS417_17215 -1.7 -1.9 peptidylprolyl isomerase compare
PS417_19725 -1.7 -4.4 flagellar biosynthesis protein FlhB compare
PS417_27875 -1.6 -5.4 histidine kinase compare
PS417_01560 -1.6 -1.9 imidazoleglycerol-phosphate dehydratase compare
PS417_05595 -1.6 -7.7 ornithine carbamoyltransferase compare
PS417_02980 -1.6 -1.6 chemotaxis protein compare
PS417_19825 -1.6 -10.2 ATPase AAA compare
PS417_16510 -1.6 -3.8 Clp protease ClpX compare
PS417_03260 -1.5 -1.6 5S ribosomal RNA compare
PS417_19745 -1.5 -5.6 flagellar assembly protein FliO compare
PS417_16715 -1.5 -1.3 DoxX family protein compare
PS417_12290 -1.5 -5.3 sulfite reductase compare
PS417_20785 -1.5 -2.4 transcriptional regulator compare
PS417_15035 -1.5 -1.8 alkylhydroperoxidase compare
PS417_08090 -1.5 -1.2 3-oxoacyl-ACP reductase compare
PS417_19665 -1.5 -2.9 flagellar motor protein MotD compare
PS417_06675 -1.4 -2.2 ATP-dependent helicase compare
PS417_08540 -1.4 -2.4 RNA helicase compare
PS417_02805 -1.4 -1.6 urease subunit gamma compare
PS417_01570 -1.4 -1.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_01640 -1.4 -3.5 histidine kinase compare
PS417_02225 -1.4 -3.0 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_01955 -1.4 -6.2 peptidase compare
PS417_19705 -1.4 -1.9 flagellar biosynthesis regulator FlhF compare
PS417_14515 -1.4 -1.8 acetylglucosaminylphosphatidylinositol deacetylase compare
PS417_16005 -1.4 -2.1 ATPase compare
PS417_21125 -1.4 -4.1 phosphoadenosine phosphosulfate reductase compare
PS417_08155 -1.3 -1.6 integration host factor subunit beta compare
PS417_07170 -1.3 -3.2 hypothetical protein compare
PS417_03560 -1.3 -1.3 GTP-binding protein compare
PS417_10010 -1.3 -1.9 Replication protein P compare
PS417_21560 -1.3 -3.9 flagellar basal body rod modification protein FlgD compare
PS417_09705 -1.3 -2.8 hypothetical protein compare
PS417_04650 -1.3 -0.6 D-alanine--D-alanine ligase compare
PS417_21390 -1.3 -3.7 hypothetical protein compare
PS417_06245 -1.3 -1.7 zinc metallopeptidase RseP compare
PS417_04585 -1.3 -1.2 hypothetical protein compare
PS417_19805 -1.3 -4.5 flagellar M-ring protein FliF compare
PS417_27010 -1.2 -7.2 threonine dehydratase compare
PS417_04440 -1.2 -2.4 hypoxanthine-guanine phosphoribosyltransferase compare
PS417_14755 -1.2 -2.2 UV damage repair endonuclease UvdE compare
PS417_19955 -1.2 -1.8 hypothetical protein compare
PS417_17240 -1.2 -3.3 trigger factor compare
PS417_05815 -1.2 -3.0 recombinase RecA compare
PS417_28220 -1.2 -1.5 LysR family transcriptional regulator compare
PS417_07640 -1.2 -2.8 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_23375 -1.2 -1.7 cytochrome C oxidase compare
PS417_24500 -1.2 -3.0 DEAD/DEAH box helicase compare
PS417_12310 -1.2 -4.7 methionine synthase compare
PS417_09010 -1.2 -1.7 phosphohistidine phosphatase compare
PS417_03165 -1.2 -3.8 hypothetical protein compare
PS417_24885 -1.1 -3.2 transcriptional regulator compare
PS417_18730 -1.1 -1.9 ABC transporter permease compare
PS417_03495 -1.1 -2.5 type III secretory protein EscS compare
PS417_09720 -1.1 -2.6 methyltransferase compare
PS417_04410 -1.1 -0.9 hypothetical protein compare
PS417_21655 -1.1 -1.1 aspartate kinase compare
PS417_23160 -1.1 -1.4 50S rRNA methyltransferase compare
PS417_18055 -1.1 -1.3 general secretion pathway protein GspK compare
PS417_19800 -1.1 -2.9 flagellar motor switch protein FliG compare
PS417_16055 -1.1 -2.5 biopolymer transporter TolR compare
PS417_21630 -1.1 -1.7 magnesium transporter compare
PS417_05535 -1.1 -1.1 Fis family transcriptional regulator compare
PS417_08685 -1.0 -1.7 flagellar hook-length control protein FliK compare
PS417_25315 -1.0 -2.6 membrane protein compare
PS417_11410 -1.0 -1.6 phospholipase compare
PS417_00705 -1.0 -1.2 MarR family transcriptional regulator compare
PS417_27585 -1.0 -1.1 diaminopimelate epimerase compare
PS417_28080 -1.0 -6.9 phosphate ABC transporter permease compare
PS417_09420 -1.0 -1.9 LysR family transcriptional regulator compare
PS417_28070 -1.0 -3.9 phosphate ABC transporter ATP-binding protein compare
PS417_27245 -1.0 -1.9 aminotransferase DegT compare
PS417_21830 -1.0 -1.5 TetR family transcriptional regulator compare
PS417_08130 -1.0 -1.6 aspartate aminotransferase compare
PS417_16370 -1.0 -4.4 chemotaxis protein CheY compare
PS417_21210 -1.0 -1.6 amidotransferase compare
PS417_06205 -1.0 -4.8 methionine aminopeptidase compare
PS417_24370 -1.0 -0.8 (2Fe-2S)-binding protein compare
PS417_23135 -1.0 -1.2 GTP-binding protein compare
PS417_06365 -1.0 -3.8 RNA polymerase sigma factor compare
PS417_09235 -1.0 -0.9 molecular chaperone compare
PS417_06165 -1.0 -2.8 thiamine biosynthesis protein ThiF compare
PS417_09700 -0.9 -3.1 transaldolase compare
PS417_26655 -0.9 -3.5 chemotaxis protein compare
PS417_17795 -0.9 -1.0 ABC transporter permease compare
PS417_27425 -0.9 -4.2 exopolyphosphatase compare
PS417_02485 -0.9 -2.4 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_15770 -0.9 -1.1 pyridoxine 5'-phosphate oxidase compare
PS417_07165 -0.9 -1.8 dihydrodipicolinate synthase compare
PS417_09085 -0.9 -1.1 hypothetical protein compare
PS417_22050 -0.9 -1.8 ribonuclease BN compare
PS417_06405 -0.9 -4.5 amino acid ABC transporter permease compare
PS417_28450 -0.9 -1.4 XRE family transcriptional regulator compare
PS417_00195 -0.9 -1.3 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment