Experiment set19IT045 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_27795 -4.3 -1.5 orotate phosphoribosyltransferase compare
PS417_09725 -4.3 -8.0 transporter compare
PS417_01575 -4.2 -6.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_23995 -4.2 -1.4 preprotein translocase subunit SecG compare
PS417_21575 -4.1 -6.9 chemotaxis protein compare
PS417_06375 -4.0 -1.4 deoxycytidine triphosphate deaminase compare
PS417_04415 -3.9 -10.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_19690 -3.8 -6.4 histidine kinase compare
PS417_21430 -3.8 -3.6 3-oxoacyl-ACP synthase compare
PS417_24745 -3.7 -5.1 gamma-glutamyl phosphate reductase compare
PS417_01855 -3.7 -3.8 phosphoribosyl-AMP cyclohydrolase compare
PS417_19665 -3.6 -4.1 flagellar motor protein MotD compare
PS417_02415 -3.6 -6.3 phosphoserine phosphatase compare
PS417_27195 -3.6 -1.7 N-acetylglutamate synthase compare
PS417_18585 -3.5 -6.6 3-isopropylmalate dehydrogenase compare
PS417_01605 -3.4 -2.3 phosphoglycerate mutase compare
PS417_23805 -3.4 -4.6 acetolactate synthase 3 regulatory subunit compare
PS417_23810 -3.4 -8.3 acetolactate synthase 3 catalytic subunit compare
PS417_18600 -3.3 -3.7 isopropylmalate isomerase compare
PS417_04420 -3.3 -9.8 histidinol dehydrogenase compare
PS417_18560 -3.2 -7.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_01570 -3.1 -2.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_20985 -3.0 -2.9 porin compare
PS417_25725 -3.0 -12.8 anthranilate synthase component I compare
PS417_00185 -3.0 -5.1 tryptophan synthase subunit beta compare
PS417_17610 -3.0 -2.8 AsnC family transcriptional regulator compare
PS417_18595 -3.0 -5.6 3-isopropylmalate dehydratase compare
PS417_23800 -3.0 -10.6 ketol-acid reductoisomerase compare
PS417_01580 -3.0 -2.0 imidazole glycerol phosphate synthase compare
PS417_25715 -3.0 -6.9 anthranilate phosphoribosyltransferase compare
PS417_24800 -2.9 -3.8 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PS417_18310 -2.8 -2.7 hypothetical protein compare
PS417_21035 -2.8 -7.5 multidrug transporter compare
PS417_23770 -2.8 -1.9 exodeoxyribonuclease V subunit alpha compare
PS417_08025 -2.7 -2.3 acetylornithine aminotransferase compare
PS417_26740 -2.7 -9.0 homoserine acetyltransferase compare
PS417_23545 -2.7 -2.4 gamma-glutamyl kinase compare
PS417_25720 -2.7 -5.6 anthranilate synthase component II compare
PS417_18530 -2.7 -4.9 O-succinylhomoserine sulfhydrylase compare
PS417_01640 -2.6 -6.9 histidine kinase compare
PS417_27135 -2.6 -1.3 glutamine synthetase compare
PS417_02005 -2.5 -10.3 glutamate synthase compare
PS417_21595 -2.5 -8.4 flagellar biosynthesis protein FlgN compare
PS417_19675 -2.5 -7.5 chemotaxis protein CheY compare
PS417_26730 -2.5 -1.2 pyrroline-5-carboxylate reductase compare
PS417_02000 -2.5 -10.8 glutamate synthase compare
PS417_26745 -2.5 -5.1 methionine biosynthesis protein MetW compare
PS417_02510 -2.4 -3.7 ATP phosphoribosyltransferase regulatory subunit compare
PS417_19870 -2.4 -5.6 flagellar rod assembly protein FlgJ compare
PS417_27040 -2.4 -3.0 3-phosphoglycerate dehydrogenase compare
PS417_19840 -2.4 -10.8 flagellar cap protein FliD compare
PS417_01560 -2.4 -2.4 imidazoleglycerol-phosphate dehydratase compare
PS417_21565 -2.3 -6.0 flagellar basal body rod protein FlgC compare
PS417_19885 -2.3 -4.2 flagellar basal body rod protein FlgG compare
PS417_19880 -2.2 -8.4 flagellar basal body L-ring protein compare
PS417_01850 -2.2 -5.8 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_00180 -2.2 -3.2 tryptophan synthase subunit alpha compare
PS417_01565 -2.2 -4.5 imidazole glycerol phosphate synthase compare
PS417_21555 -2.2 -11.1 flagellar hook protein FlgE compare
PS417_21655 -2.2 -1.4 aspartate kinase compare
PS417_19725 -2.2 -5.5 flagellar biosynthesis protein FlhB compare
PS417_14940 -2.2 -2.3 LysR family transcriptional regulator compare
PS417_27865 -2.1 -4.0 LysR family transcriptional regulator compare
PS417_25710 -2.1 -1.3 indole-3-glycerol-phosphate synthase compare
PS417_19860 -2.1 -12.2 flagellar hook protein FlgL compare
PS417_06200 -2.1 -8.5 protein-PII uridylyltransferase compare
PS417_22990 -2.1 -1.6 iron dicitrate transport regulator FecR compare
PS417_22565 -2.1 -1.2 formyltetrahydrofolate deformylase compare
PS417_12855 -2.0 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19650 -2.0 -4.9 chemotaxis protein CheW compare
PS417_22445 -2.0 -4.3 ATP-dependent DNA helicase RuvB compare
PS417_03560 -2.0 -1.7 GTP-binding protein compare
PS417_21585 -2.0 -9.1 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_19660 -2.0 -8.0 cobalamin biosynthesis protein CobQ compare
PS417_19850 -2.0 -7.1 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_19865 -2.0 -10.0 flagellar hook protein FlgK compare
PS417_08130 -1.9 -3.1 aspartate aminotransferase compare
PS417_19740 -1.9 -7.9 flagellar biosynthesis protein flip compare
PS417_19655 -1.9 -3.0 chemotaxis protein CheW compare
PS417_08155 -1.9 -1.5 integration host factor subunit beta compare
PS417_00175 -1.9 -1.4 CigR compare
PS417_19790 -1.8 -3.3 ATP synthase compare
PS417_04585 -1.8 -2.1 hypothetical protein compare
PS417_02555 -1.8 -9.9 exoribonuclease R compare
PS417_04595 -1.8 -2.6 cell division protein MraZ compare
PS417_20705 -1.8 -4.9 cbb3-type cytochrome c oxidase subunit II compare
PS417_04650 -1.8 -1.2 D-alanine--D-alanine ligase compare
PS417_19695 -1.8 -8.6 flagellar biosynthesis sigma factor compare
PS417_23110 -1.8 -6.1 2-isopropylmalate synthase compare
PS417_27875 -1.7 -6.6 histidine kinase compare
PS417_21570 -1.7 -5.4 flagellar basal body rod protein FlgB compare
PS417_06680 -1.7 -6.3 nuclease PIN compare
PS417_04375 -1.7 -2.2 ABC transporter ATP-binding protein compare
PS417_19795 -1.7 -11.8 flagellar assembly protein FliH compare
PS417_05635 -1.7 -4.8 membrane protein compare
PS417_27835 -1.7 -5.2 endoribonuclease compare
PS417_02975 -1.7 -4.4 3-dehydroquinate dehydratase compare
PS417_16510 -1.7 -2.4 Clp protease ClpX compare
PS417_19835 -1.7 -2.1 flagellar biosynthesis protein FliS compare
PS417_25390 -1.6 -3.0 MFS transporter compare
PS417_22450 -1.6 -1.0 ATP-dependent DNA helicase RuvA compare
PS417_27800 -1.6 -2.7 exodeoxyribonuclease III compare
PS417_19710 -1.6 -8.2 flagellar biosynthesis protein FlhA compare
PS417_18780 -1.6 -1.5 flavin reductase compare
PS417_19765 -1.6 -9.5 flagellar hook-length control protein compare
PS417_26890 -1.6 -3.3 dihydroxy-acid dehydratase compare
PS417_00385 -1.6 -1.2 Fur family transcriptional regulator compare
PS417_24155 -1.6 -1.5 ATP-binding protein compare
PS417_16490 -1.6 -1.5 cell division protein FtsK compare
PS417_22570 -1.5 -1.0 H-NS histone compare
PS417_19745 -1.5 -5.4 flagellar assembly protein FliO compare
PS417_27870 -1.5 -2.3 ATP-dependent DNA helicase RecG compare
PS417_19825 -1.5 -9.9 ATPase AAA compare
PS417_08245 -1.5 -1.1 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_19755 -1.4 -2.3 flagellar motor switch protein FliM compare
PS417_25910 -1.4 -5.6 amine oxidase compare
PS417_26985 -1.4 -3.2 phosphoenolpyruvate-protein phosphotransferase compare
PS417_01635 -1.4 -4.2 nitrogen regulation protein NR(I) compare
PS417_08540 -1.4 -2.4 RNA helicase compare
PS417_23025 -1.4 -4.5 murein transglycosylase compare
PS417_05815 -1.4 -4.3 recombinase RecA compare
PS417_24500 -1.3 -3.1 DEAD/DEAH box helicase compare
PS417_05595 -1.3 -6.7 ornithine carbamoyltransferase compare
PS417_13185 -1.3 -2.4 RND transporter compare
PS417_26120 -1.3 -1.4 hypothetical protein compare
PS417_01920 -1.3 -1.0 ATP-dependent protease subunit HslV compare
PS417_17070 -1.3 -2.0 RNA polymerase subunit sigma-24 compare
PS417_08135 -1.3 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_12290 -1.3 -5.1 sulfite reductase compare
PS417_21390 -1.3 -5.2 hypothetical protein compare
PS417_07710 -1.3 -4.6 membrane protein compare
PS417_10010 -1.3 -3.7 Replication protein P compare
PS417_19705 -1.2 -2.6 flagellar biosynthesis regulator FlhF compare
PS417_23775 -1.2 -1.9 exodeoxyribonuclease V subunit beta compare
PS417_12390 -1.2 -2.2 hypothetical protein compare
PS417_17945 -1.2 -1.0 hypothetical protein compare
PS417_07615 -1.2 -4.5 TetR family transcriptional regulator compare
PS417_09085 -1.2 -1.4 hypothetical protein compare
PS417_21125 -1.2 -4.4 phosphoadenosine phosphosulfate reductase compare
PS417_09720 -1.2 -2.7 methyltransferase compare
PS417_25915 -1.2 -2.3 carbon-nitrogen hydrolase compare
PS417_28070 -1.2 -4.1 phosphate ABC transporter ATP-binding protein compare
PS417_19955 -1.2 -1.8 hypothetical protein compare
PS417_01620 -1.1 -2.0 preprotein translocase subunit SecB compare
PS417_09695 -1.1 -1.5 hydrolase compare
PS417_19785 -1.1 -4.3 flagellar biogenesis protein compare
PS417_19730 -1.1 -3.9 flagellar biosynthesis protein FliR compare
PS417_19805 -1.1 -2.7 flagellar M-ring protein FliF compare
PS417_19200 -1.1 -2.3 fumarate hydratase compare
PS417_09710 -1.1 -2.1 dehydrogenase compare
PS417_28510 -1.1 -3.1 chromosome partitioning protein compare
PS417_04875 -1.1 -1.0 molybdenum cofactor biosynthesis protein MoaE compare
PS417_19735 -1.1 -5.9 flagellar biosynthesis protein FliQ compare
PS417_20775 -1.1 -5.1 coproporphyrinogen III oxidase compare
PS417_08685 -1.1 -1.5 flagellar hook-length control protein FliK compare
PS417_04290 -1.1 -3.4 hypothetical protein compare
PS417_21630 -1.1 -1.9 magnesium transporter compare
PS417_10720 -1.1 -4.8 chemotaxis protein CheY compare
PS417_16370 -1.1 -3.9 chemotaxis protein CheY compare
PS417_27585 -1.1 -1.6 diaminopimelate epimerase compare
PS417_23950 -1.1 -1.8 polynucleotide phosphorylase/polyadenylase compare
PS417_01750 -1.1 -1.7 histidine ammonia-lyase compare
PS417_27010 -1.0 -5.6 threonine dehydratase compare
PS417_01955 -1.0 -5.5 peptidase compare
PS417_17780 -1.0 -1.1 Ais protein compare
PS417_25905 -1.0 -2.6 AsnC family transcriptional regulator compare
PS417_09700 -1.0 -3.1 transaldolase compare
PS417_15105 -1.0 -4.3 membrane protein compare
PS417_06365 -1.0 -5.1 RNA polymerase sigma factor compare
PS417_22175 -1.0 -1.1 amino acid transporter LysE compare
PS417_13425 -1.0 -1.8 cupin compare
PS417_07165 -1.0 -2.1 dihydrodipicolinate synthase compare
PS417_19415 -1.0 -2.2 allantoinase compare
PS417_07565 -1.0 -1.1 hypothetical protein compare
PS417_07175 -1.0 -3.8 beta-lactamase compare
PS417_16005 -1.0 -2.1 ATPase compare
PS417_12110 -1.0 -1.4 ATP-binding protein compare
PS417_07170 -1.0 -2.3 hypothetical protein compare
PS417_20340 -1.0 -1.6 hypothetical protein compare
PS417_15135 -1.0 -1.1 hypothetical protein compare
PS417_18265 -1.0 -2.1 AsnC family transcriptional regulator compare
PS417_04390 -1.0 -2.5 toluene tolerance protein compare
PS417_20785 -0.9 -2.9 transcriptional regulator compare
PS417_00590 -0.9 -1.6 5S ribosomal RNA compare
PS417_15820 -0.9 -2.2 universal stress protein UspA compare
PS417_15285 -0.9 -0.9 type VI secretion protein compare
PS417_19605 -0.9 -1.1 hypothetical protein compare
PS417_06710 -0.9 -1.5 beta-ketoadipyl CoA thiolase compare
PS417_06405 -0.9 -5.9 amino acid ABC transporter permease compare
PS417_06395 -0.9 -1.3 amino acid transporter compare
PS417_02575 -0.9 -2.9 membrane protein compare
PS417_04385 -0.9 -1.6 organic solvent ABC transporter substrate-binding protein compare
PS417_06125 -0.9 -1.5 hypothetical protein compare
PS417_12310 -0.9 -3.5 methionine synthase compare
PS417_10675 -0.9 -0.9 TetR family transcriptional regulator compare
PS417_06415 -0.9 -3.3 ABC transporter substrate-binding protein compare
PS417_27315 -0.9 -1.0 hypothetical protein compare
PS417_10305 -0.9 -1.4 hypothetical protein compare
PS417_27245 -0.9 -2.2 aminotransferase DegT compare
PS417_28080 -0.9 -5.9 phosphate ABC transporter permease compare


Specific Phenotypes

For 1 genes in this experiment