Experiment set19IT042 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_19745 -11.4 -4.0 flagellar assembly protein FliO compare
PS417_01565 -9.4 -3.4 imidazole glycerol phosphate synthase compare
PS417_21565 -9.3 -3.8 flagellar basal body rod protein FlgC compare
PS417_19795 -9.3 -8.8 flagellar assembly protein FliH compare
PS417_19740 -9.3 -4.7 flagellar biosynthesis protein flip compare
PS417_19730 -9.2 -3.0 flagellar biosynthesis protein FliR compare
PS417_19765 -9.2 -6.4 flagellar hook-length control protein compare
PS417_19880 -9.2 -5.7 flagellar basal body L-ring protein compare
PS417_05635 -9.0 -4.8 membrane protein compare
PS417_25720 -8.9 -4.5 anthranilate synthase component II compare
PS417_18540 -8.1 -3.3 colicin V production CvpA compare
PS417_21575 -8.0 -4.3 chemotaxis protein compare
PS417_19710 -7.7 -15.7 flagellar biosynthesis protein FlhA compare
PS417_19860 -7.7 -12.9 flagellar hook protein FlgL compare
PS417_19725 -7.7 -4.1 flagellar biosynthesis protein FlhB compare
PS417_19825 -7.6 -11.4 ATPase AAA compare
PS417_21570 -7.4 -4.9 flagellar basal body rod protein FlgB compare
PS417_19755 -7.3 -1.3 flagellar motor switch protein FliM compare
PS417_19690 -7.1 -4.0 histidine kinase compare
PS417_26740 -7.0 -7.7 homoserine acetyltransferase compare
PS417_19665 -6.9 -3.1 flagellar motor protein MotD compare
PS417_19870 -6.9 -3.9 flagellar rod assembly protein FlgJ compare
PS417_04415 -6.9 -6.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_23800 -6.8 -8.1 ketol-acid reductoisomerase compare
PS417_19735 -6.8 -4.0 flagellar biosynthesis protein FliQ compare
PS417_19650 -6.8 -3.2 chemotaxis protein CheW compare
PS417_21585 -6.8 -7.1 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_19705 -6.7 -2.4 flagellar biosynthesis regulator FlhF compare
PS417_01575 -6.6 -2.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_19840 -6.6 -11.6 flagellar cap protein FliD compare
PS417_16400 -6.5 -2.1 NAD(P)H-quinone oxidoreductase compare
PS417_23950 -6.5 -2.1 polynucleotide phosphorylase/polyadenylase compare
PS417_01635 -6.5 -4.4 nitrogen regulation protein NR(I) compare
PS417_18560 -6.5 -6.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_18530 -6.3 -5.2 O-succinylhomoserine sulfhydrylase compare
PS417_27040 -6.3 -1.9 3-phosphoglycerate dehydrogenase compare
PS417_00185 -6.2 -3.0 tryptophan synthase subunit beta compare
PS417_19695 -6.2 -5.4 flagellar biosynthesis sigma factor compare
PS417_02280 -6.1 -1.9 GlcNAc-PI de-N-acetylase compare
PS417_19885 -6.1 -1.5 flagellar basal body rod protein FlgG compare
PS417_21125 -6.1 -3.9 phosphoadenosine phosphosulfate reductase compare
PS417_19675 -6.0 -4.4 chemotaxis protein CheY compare
PS417_02510 -6.0 -5.1 ATP phosphoribosyltransferase regulatory subunit compare
PS417_23810 -5.9 -12.1 acetolactate synthase 3 catalytic subunit compare
PS417_19850 -5.9 -7.4 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_19790 -5.9 -3.3 ATP synthase compare
PS417_21555 -5.8 -7.5 flagellar hook protein FlgE compare
PS417_06200 -5.8 -5.6 protein-PII uridylyltransferase compare
PS417_25725 -5.7 -9.1 anthranilate synthase component I compare
PS417_19660 -5.7 -3.8 cobalamin biosynthesis protein CobQ compare
PS417_23545 -5.6 -2.1 gamma-glutamyl kinase compare
PS417_24675 -5.5 -2.0 lipoyl synthase compare
PS417_04420 -5.4 -8.4 histidinol dehydrogenase compare
PS417_00370 -5.4 -1.0 hypothetical protein compare
PS417_21595 -5.4 -3.2 flagellar biosynthesis protein FlgN compare
PS417_19865 -5.3 -6.3 flagellar hook protein FlgK compare
PS417_05595 -5.2 -8.2 ornithine carbamoyltransferase compare
PS417_06600 -5.2 -1.0 leucine/isoleucine/valine transporter ATP-binding subunit compare
PS417_23805 -5.0 -3.7 acetolactate synthase 3 regulatory subunit compare
PS417_19785 -4.9 -4.4 flagellar biogenesis protein compare
PS417_08155 -4.9 -1.5 integration host factor subunit beta compare
PS417_20105 -4.9 -16.4 glycosyl transferase compare
PS417_22565 -4.8 -0.9 formyltetrahydrofolate deformylase compare
PS417_19835 -4.7 -1.2 flagellar biosynthesis protein FliS compare
PS417_19630 -4.7 -3.0 LuxR family transcriptional regulator compare
PS417_24745 -4.6 -1.8 gamma-glutamyl phosphate reductase compare
PS417_05975 -4.6 -0.8 chemotaxis protein CheW compare
PS417_02560 -4.6 -1.7 23S rRNA methyltransferase compare
PS417_01640 -4.5 -3.8 histidine kinase compare
PS417_01855 -4.5 -1.8 phosphoribosyl-AMP cyclohydrolase compare
PS417_26745 -4.5 -4.0 methionine biosynthesis protein MetW compare
PS417_27795 -4.5 -0.8 orotate phosphoribosyltransferase compare
PS417_02895 -4.2 -1.9 precorrin-6Y C5,15-methyltransferase compare
PS417_01955 -4.2 -7.8 peptidase compare
PS417_23995 -4.2 -0.8 preprotein translocase subunit SecG compare
PS417_00755 -4.1 -0.8 biofilm PGA synthesis protein PgaD compare
PS417_25715 -4.1 -4.5 anthranilate phosphoribosyltransferase compare
PS417_14940 -4.1 -1.3 LysR family transcriptional regulator compare
PS417_01850 -4.1 -3.4 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_06375 -4.0 -0.7 deoxycytidine triphosphate deaminase compare
PS417_01915 -4.0 -0.7 ATP-dependent protease ATP-binding subunit HslU compare
PS417_21630 -4.0 -1.9 magnesium transporter compare
PS417_08540 -4.0 -1.6 RNA helicase compare
PS417_17565 -4.0 -1.9 branched-chain amino acid aminotransferase compare
PS417_28220 -4.0 -1.8 LysR family transcriptional regulator compare
PS417_19805 -3.9 -3.4 flagellar M-ring protein FliF compare
PS417_06945 -3.9 -1.0 membrane protein compare
PS417_27865 -3.9 -2.8 LysR family transcriptional regulator compare
PS417_20025 -3.8 -1.4 alpha-ribazole phosphatase compare
PS417_21480 -3.8 -1.2 23S rRNA pseudouridylate synthase compare
PS417_20985 -3.7 -1.7 porin compare
PS417_23025 -3.7 -6.5 murein transglycosylase compare
PS417_19800 -3.7 -2.4 flagellar motor switch protein FliG compare
PS417_27195 -3.7 -1.0 N-acetylglutamate synthase compare
PS417_26890 -3.7 -4.2 dihydroxy-acid dehydratase compare
PS417_08025 -3.7 -1.6 acetylornithine aminotransferase compare
PS417_21390 -3.6 -3.7 hypothetical protein compare
PS417_05160 -3.6 -0.9 DNA polymerase III subunit chi compare
PS417_02415 -3.6 -4.1 phosphoserine phosphatase compare
PS417_02210 -3.6 -4.1 diguanylate cyclase compare
PS417_02005 -3.5 -8.3 glutamate synthase compare
PS417_02000 -3.4 -10.9 glutamate synthase compare
PS417_05815 -3.4 -3.9 recombinase RecA compare
PS417_22450 -3.4 -1.1 ATP-dependent DNA helicase RuvA compare
PS417_20095 -3.3 -10.5 hypothetical protein compare
PS417_00180 -3.3 -1.9 tryptophan synthase subunit alpha compare
PS417_01605 -3.3 -1.2 phosphoglycerate mutase compare
PS417_08135 -3.3 -5.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_25710 -3.2 -1.2 indole-3-glycerol-phosphate synthase compare
PS417_16715 -3.2 -1.7 DoxX family protein compare
PS417_06680 -3.2 -7.9 nuclease PIN compare
PS417_17945 -3.2 -0.8 hypothetical protein compare
PS417_24710 -3.2 -5.7 lipoprotein compare
PS417_14065 -3.2 -11.3 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_27835 -3.1 -6.0 endoribonuclease compare
PS417_23580 -3.1 -1.1 peptidylprolyl isomerase compare
PS417_27870 -3.1 -3.2 ATP-dependent DNA helicase RecG compare
PS417_08335 -3.0 -1.8 hypothetical protein compare
PS417_27075 -3.0 -3.8 thiol-disulfide isomerase compare
PS417_18690 -2.9 -3.0 aromatic amino acid aminotransferase compare
PS417_20090 -2.9 -6.8 DegT/DnrJ/EryC1/StrS aminotransferase compare
PS417_15090 -2.9 -1.7 hypothetical protein compare
PS417_01570 -2.8 -2.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_07710 -2.8 -5.6 membrane protein compare
PS417_12855 -2.8 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_21015 -2.8 -1.8 EstX protein compare
PS417_09915 -2.8 -1.4 hypothetical protein compare
PS417_26995 -2.8 -7.8 phosphoserine phosphatase compare
PS417_19645 -2.8 -2.5 chemotaxis protein compare
PS417_04375 -2.8 -2.0 ABC transporter ATP-binding protein compare
PS417_27315 -2.8 -1.0 hypothetical protein compare
PS417_25645 -2.8 -5.3 peptidase M23 compare
PS417_19820 -2.8 -5.1 histidine kinase compare
PS417_08125 -2.7 -0.5 prephenate dehydratase compare
PS417_23490 -2.7 -1.2 dihydrofolate reductase compare
PS417_09725 -2.7 -5.1 transporter compare
PS417_04650 -2.7 -0.7 D-alanine--D-alanine ligase compare
PS417_26730 -2.6 -0.7 pyrroline-5-carboxylate reductase compare
PS417_16510 -2.6 -3.0 Clp protease ClpX compare
PS417_07575 -2.6 -4.0 multifunctional fatty acid oxidation complex subunit alpha compare
PS417_27800 -2.6 -2.5 exodeoxyribonuclease III compare
PS417_22445 -2.6 -3.0 ATP-dependent DNA helicase RuvB compare
PS417_08220 -2.6 -0.7 epimerase compare
PS417_08195 -2.6 -6.3 hypothetical protein compare
PS417_23770 -2.6 -1.0 exodeoxyribonuclease V subunit alpha compare
PS417_09695 -2.6 -1.6 hydrolase compare
PS417_22840 -2.6 -1.2 tRNA-Met compare
PS417_08230 -2.5 -1.2 lipopolysaccharide biosynthesis protein RfbH compare
PS417_06075 -2.5 -1.0 hypothetical protein compare
PS417_21510 -2.5 -1.6 histidine kinase compare
PS417_19830 -2.4 -2.0 flagellar assembly protein FliT compare
PS417_08225 -2.4 -3.4 acetolactate synthase compare
PS417_08245 -2.4 -0.8 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_20635 -2.4 -0.8 ABC transporter ATP-binding protein compare
PS417_19655 -2.4 -1.6 chemotaxis protein CheW compare
PS417_11925 -2.3 -1.7 hypothetical protein compare
PS417_08205 -2.3 -3.0 acetyltransferase compare
PS417_19620 -2.3 -1.4 hypothetical protein compare
PS417_22780 -2.3 -2.9 XRE family transcriptional regulator compare
PS417_07565 -2.3 -2.1 hypothetical protein compare
PS417_18055 -2.3 -1.1 general secretion pathway protein GspK compare
PS417_03165 -2.3 -2.9 hypothetical protein compare
PS417_21655 -2.3 -0.8 aspartate kinase compare
PS417_16515 -2.2 -2.0 Clp protease ClpS compare
PS417_25175 -2.2 -2.8 hypothetical protein compare
PS417_01560 -2.2 -1.9 imidazoleglycerol-phosphate dehydratase compare
PS417_04365 -2.2 -0.8 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_07470 -2.2 -1.3 hypothetical protein compare
PS417_14725 -2.2 -5.7 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
PS417_10955 -2.2 -2.8 porin compare
PS417_27245 -2.2 -3.3 aminotransferase DegT compare
PS417_18570 -2.2 -3.0 peptidoglycan-binding protein compare
PS417_09010 -2.1 -1.8 phosphohistidine phosphatase compare
PS417_02975 -2.1 -2.5 3-dehydroquinate dehydratase compare
PS417_24835 -2.1 -2.9 hypothetical protein compare
PS417_27585 -2.1 -1.6 diaminopimelate epimerase compare
PS417_09210 -2.1 -1.1 TetR family transcriptional regulator compare
PS417_15480 -2.1 -1.6 ABC transporter substrate-binding protein compare
PS417_03385 -2.1 -1.1 flavin reductase compare
PS417_00375 -2.1 -2.0 membrane protein compare
PS417_07615 -2.1 -4.4 TetR family transcriptional regulator compare
PS417_20160 -2.1 -1.6 cysteine synthase compare
PS417_24650 -2.0 -1.2 membrane protein compare
PS417_22855 -2.0 -4.3 ssDNA exonuclease RecJ compare
PS417_08580 -2.0 -4.2 histidine kinase compare
PS417_27010 -2.0 -6.8 threonine dehydratase compare
PS417_06175 -2.0 -3.9 cysteine sulfinate desulfinase compare
PS417_15105 -2.0 -4.8 membrane protein compare
PS417_17720 -2.0 -3.2 xylitol 2-dehydrogenase (EC 1.1.1.9) (from data) compare
PS417_02705 -2.0 -1.6 urease accessory protein UreF compare
PS417_08170 -2.0 -7.2 capsular biosynthesis protein compare
PS417_15495 -2.0 -0.9 FAD-dependent oxidoreductase compare
PS417_15110 -1.9 -6.8 protein BatD compare
PS417_24235 -1.9 -2.5 hypothetical protein compare
PS417_10015 -1.9 -0.8 hypothetical protein compare
PS417_00925 -1.9 -1.5 hypothetical protein compare
PS417_25825 -1.9 -2.1 sulfurtransferase compare
PS417_02485 -1.9 -2.8 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_10675 -1.9 -0.8 TetR family transcriptional regulator compare
PS417_22895 -1.8 -6.8 tyrosine recombinase XerD compare


Specific Phenotypes

For 3 genes in this experiment