Experiment set19IT042 for Pseudomonas simiae WCS417

200 most detrimental genes:

gene	name	fitness	t score	description
PS417_15710		+3.5	5.4	nitrate reductase
PS417_15695		+3.5	4.9	molybdenum cofactor biosynthesis protein A
PS417_23095		+2.5	2.7	exodeoxyribonuclease
PS417_15705		+2.4	3.4	nitrate reductase
PS417_27135		+2.2	2.2	glutamine synthetase
PS417_15540		+2.1	1.8	NUDIX hydrolase
PS417_06540		+2.0	3.0	membrane protein
PS417_25270		+1.7	5.3	NrdR family transcriptional regulator
PS417_08160		+1.6	2.1	hypothetical protein
PS417_23315		+1.6	1.9	transcriptional regulator
PS417_01945		+1.6	2.8	nuclease
PS417_00175		+1.5	1.8	CigR
PS417_06615		+1.5	5.4	ABC transporter for branched-chain amino acids, substrate-binding component (from data)
PS417_00345		+1.5	2.4	copper-binding protein
PS417_11950		+1.4	1.8	hypothetical protein
PS417_09220		+1.4	2.3	cupin
PS417_18390		+1.4	4.0	LacI family transcriptional regulator
PS417_22375		+1.4	1.1	cold-shock protein
PS417_00455		+1.4	2.3	hypothetical protein
PS417_00650		+1.4	1.1	LysR family transcriptional regulator
PS417_27605		+1.4	3.5	hypothetical protein
PS417_14075		+1.4	2.4	hypothetical protein
PS417_15715		+1.3	3.4	nitrate reductase
PS417_19425		+1.3	1.1	allantoicase
PS417_02985		+1.3	6.3	diguanylate cyclase
PS417_22550		+1.3	2.7	ATP-binding protein
PS417_00510		+1.3	1.3	membrane protein
PS417_28325		+1.3	1.8	phosphoribosyl-AMP cyclohydrolase
PS417_07985		+1.3	1.7	AbrB family transcriptional regulator
PS417_24265		+1.2	3.3	ABC transporter ATP-binding protein
PS417_18400		+1.2	2.3	D-ribose ABC transporter, ATPase component RbsA (from data)
PS417_21380		+1.2	2.0	GntR family transcriptional regulator
PS417_11865		+1.2	1.7	xylose isomerase
PS417_01285		+1.2	1.7	haloacid dehalogenase
PS417_17070		+1.2	1.4	RNA polymerase subunit sigma-24
PS417_01115		+1.1	1.3	serine acetyltransferase
PS417_01875		+1.1	1.3	polyhydroxyalkanoic acid system protein
PS417_24830		+1.1	2.2	GNAT family acetyltransferase
PS417_11400		+1.1	1.6	phosphoglycerate mutase
PS417_10320		+1.1	2.3	hypothetical protein
PS417_12390		+1.1	1.4	hypothetical protein
PS417_18310		+1.1	1.1	hypothetical protein
PS417_08770		+1.1	2.5	hypothetical protein
PS417_08470		+1.1	4.2	hypothetical protein
PS417_16045		+1.1	1.8	acyl-CoA dehydrogenase
PS417_21870		+1.0	1.5	glycerophosphodiester phosphodiesterase
PS417_26785		+1.0	1.9	membrane protein
PS417_11045		+1.0	2.7	3-oxoacyl-ACP reductase
PS417_27340		+1.0	2.7	NADPH:quinone oxidoreductase
PS417_05780		+1.0	3.3	hypothetical protein
PS417_22370		+1.0	3.6	Aminomethyltransferase (EC 2.1.2.10) (from data)
PS417_15690		+1.0	2.6	ribonucleoside-triphosphate reductase
PS417_22160		+1.0	3.4	3-beta hydroxysteroid dehydrogenase
PS417_11555		+1.0	1.6	(2Fe-2S)-binding protein
PS417_08620		+1.0	0.8	hypothetical protein
PS417_26755		+1.0	2.2	nucleoside-triphosphate diphosphatase
PS417_12700		+1.0	2.3	ABC transporter for D-Mannitol and D-Sorbitol, ATPase component (from data)
PS417_10245		+1.0	0.7	hypothetical protein
PS417_15125		+1.0	1.5	glutathione S-transferase
PS417_15135		+1.0	1.4	hypothetical protein
PS417_22175		+1.0	0.8	amino acid transporter LysE
PS417_14590		+1.0	0.9	LysR family transcriptional regulator
PS417_20855		+1.0	0.5	hypothetical protein
PS417_17780		+1.0	0.9	Ais protein
PS417_13735		+1.0	1.1	hypothetical protein
PS417_05785		+1.0	2.7	tail protein
PS417_26295		+1.0	1.1	gamma-butyrobetaine dioxygenase
PS417_19720		+1.0	0.8	DNA-binding protein
PS417_13730		+0.9	1.0	hypothetical protein
PS417_27180		+0.9	1.7	peroxidase
PS417_00550		+0.9	0.8	hypothetical protein
PS417_15780		+0.9	1.7	membrane protein
PS417_02175		+0.9	1.6	transcriptional regulator
PS417_03710		+0.9	2.9	metal-binding protein
PS417_01890		+0.9	2.5	TetR family transcriptional regulator
PS417_08435		+0.9	1.0	pilus assembly protein PilZ
PS417_17515		+0.9	2.2	GfdT protein
PS417_05470		+0.9	2.2	DSBA oxidoreductase
PS417_02745		+0.9	1.7	FMN-dependent NADH-azoreductase
PS417_17925		+0.9	1.7	acyl-CoA dehydrogenase
PS417_27205		+0.9	1.3	adenylate cyclase
PS417_11965		+0.9	1.5	GCN5 family acetyltransferase
PS417_12110		+0.9	1.5	ATP-binding protein
PS417_12780		+0.9	3.7	(Fe-S)-binding protein
PS417_27610		+0.9	2.2	hypothetical protein
PS417_15915		+0.9	0.9	hypothetical protein
PS417_11535		+0.9	1.7	nicotinate phosphoribosyltransferase
PS417_03915		+0.9	1.4	tRNA-Thr
PS417_24575		+0.9	0.9	hypothetical protein
PS417_18760		+0.9	1.2	hypothetical protein
PS417_16205		+0.9	2.1	hypothetical protein
PS417_22005		+0.9	2.3	epimerase
PS417_04530		+0.9	2.8	glycerate dehydrogenase
PS417_16815		+0.9	1.2	acyl-CoA dehydrogenase
PS417_05095		+0.9	1.3	membrane protein
PS417_08380		+0.9	2.9	ABC transporter ATP-binding protein
PS417_18370		+0.9	0.9	hypothetical protein
PS417_07240		+0.9	1.6	Transcriptional regulator of deoxyribose catabolism (from data)
PS417_01435		+0.9	0.9	hypothetical protein
PS417_20140		+0.9	1.5	nucleoprotein/polynucleotide-associated enzyme
PS417_10050		+0.9	1.9	hypothetical protein
PS417_12595		+0.9	1.2	transcriptional regulator
PS417_02915		+0.9	1.8	precorrin-3B C17-methyltransferase
PS417_26645		+0.9	2.0	chemotaxis protein
PS417_28250		+0.9	3.5	cell wall assembly protein
PS417_23405		+0.9	1.7	transcriptional regulator
PS417_08150		+0.8	1.8	hypothetical protein
PS417_16035		+0.8	2.6	ABC transporter substrate-binding protein
PS417_03875		+0.8	1.1	membrane protein
PS417_26770		+0.8	0.9	tRNA (guanine-N7)-methyltransferase
PS417_23170		+0.8	1.2	FeS assembly protein IscX
PS417_14830		+0.8	2.4	Cro/Cl family transcriptional regulator
PS417_26580		+0.8	1.6	malonate transporter
PS417_28350		+0.8	2.2	fatty acid methyltransferase
PS417_09075		+0.8	2.4	chemotaxis protein
PS417_12635		+0.8	1.3	alkanesulfonate monooxygenase
PS417_01590		+0.8	1.4	polysaccharide deacetylase
PS417_27935		+0.8	0.9	type VI secretion protein
PS417_21875		+0.8	1.1	AraC family transcriptional regulator
PS417_26655		+0.8	2.5	chemotaxis protein
PS417_11010		+0.8	1.6	FAH family protein
PS417_27295		+0.8	2.9	hypothetical protein
PS417_02805		+0.8	1.0	urease subunit gamma
PS417_19605		+0.8	0.6	hypothetical protein
PS417_00155		+0.8	1.8	2-dehydro-3-deoxygalactonokinase
PS417_15720		+0.8	4.1	nitrate reductase
PS417_26255		+0.8	2.2	hypothetical protein
PS417_05775		+0.8	1.7	tail tape measure protein
PS417_10825		+0.8	2.1	glycine/betaine ABC transporter substrate-binding protein
PS417_24520		+0.8	2.3	DNA polymerase III subunit epsilon
PS417_04690		+0.8	2.0	transcriptional regulator
PS417_17735		+0.8	1.3	LacI family transcriptional regulator
PS417_12400		+0.8	0.9	oxidoreductase
PS417_03630		+0.8	1.9	hypothetical protein
PS417_21275		+0.8	4.1	GntR family transcriptional regulator
PS417_26395		+0.8	1.2	hypothetical protein
PS417_05310		+0.8	2.3	hypothetical protein
PS417_23710		+0.8	2.1	Kynurenine formamidase, bacterial (EC 3.5.1.9) (from data)
PS417_26530		+0.8	0.9	hypothetical protein
PS417_10205		+0.8	1.8	hypothetical protein
PS417_17885		+0.8	1.9	moaF
PS417_17795		+0.8	0.9	ABC transporter permease
PS417_26095		+0.8	2.7	ornithine cyclodeaminase
PS417_25970		+0.8	2.9	diguanylate cyclase
PS417_14805		+0.8	1.2	AraC family transcriptional regulator
PS417_26605		+0.8	0.6	malonate decarboxylase subunit beta
PS417_14185		+0.8	2.2	transcriptional regulator
PS417_00820		+0.8	3.0	hypothetical protein
PS417_22935		+0.7	1.4	hypothetical protein
PS417_18010		+0.7	1.6	acid phosphatase
PS417_14855		+0.7	1.7	gluconolactonase
PS417_18450		+0.7	1.2	hydrolase
PS417_03780		+0.7	1.4	general secretion pathway protein GspH
PS417_02115		+0.7	1.9	acyltransferase
PS417_20235		+0.7	2.0	hypothetical protein
PS417_11900		+0.7	2.9	conjugal transfer protein TraR
PS417_00810		+0.7	1.2	RNA polymerase sigma factor
PS417_09955		+0.7	2.6	hypothetical protein
PS417_10575		+0.7	0.9	DNA alkylation repair protein
PS417_13590		+0.7	1.6	histidine kinase
PS417_26175		+0.7	0.4	sarcosine oxidase subunit gamma
PS417_02760		+0.7	1.0	AraC family transcriptional regulator
PS417_15650		+0.7	0.7	glutamine amidotransferase
PS417_26875		+0.7	2.3	histidine kinase
PS417_17630		+0.7	0.8	RNA polymerase sigma factor
PS417_16015		+0.7	2.1	aldolase
PS417_18595		+0.7	1.5	3-isopropylmalate dehydratase
PS417_12490		+0.7	1.0	autotransporter adhesin
PS417_01145		+0.7	0.5	taurine transporter ATP-binding subunit
PS417_22715		+0.7	1.2	heme oxygenase
PS417_23460		+0.7	1.3	LysR family transcriptional regulator
PS417_08425		+0.7	2.3	acetyltransferase
PS417_04535		+0.7	1.4	lysine transporter LysE
PS417_00355		+0.7	1.4	metal ABC transporter permease
PS417_13540		+0.7	1.9	sodium:proton antiporter
PS417_12525		+0.7	1.5	hypothetical protein
PS417_26265		+0.7	1.0	hypothetical protein
PS417_20715		+0.7	0.8	cytochrome Cbb3
PS417_13715		+0.7	1.7	hypothetical protein
PS417_08415		+0.7	2.5	hypothetical protein
PS417_10265		+0.7	1.1	peptidase
PS417_04000		+0.7	2.1	hypothetical protein
PS417_19065		+0.7	0.5	monooxygenase
PS417_21070		+0.7	1.0	aconitate hydratase
PS417_01490		+0.7	1.2	ABC transporter permease
PS417_28270		+0.7	1.6	hypothetical protein
PS417_00545		+0.7	1.4	hypothetical protein
PS417_13245		+0.7	1.6	saccharopine dehydrogenase
PS417_12870		+0.7	1.1	enoyl-CoA hydratase
PS417_14890		+0.7	1.3	LysR family transcriptional regulator
PS417_01965		+0.7	0.5	fimbriae biosynthesis protein
PS417_13510		+0.7	0.5	polyketide cyclase
PS417_28175		+0.7	2.8	GNAT family acetyltransferase
PS417_09335		+0.7	0.9	HAD family hydrolase
PS417_28280		+0.7	0.8	hypothetical protein
PS417_08015		+0.7	1.3	haloacid dehalogenase
PS417_25280		+0.7	2.4	methyltransferase
PS417_15290		+0.7	1.6	type VI secretion protein
PS417_12650		+0.7	1.5	magnesium transporter
PS417_15735		+0.7	1.4	histidine kinase

Specific Phenotypes

For 3 genes in this experiment