Experiment set19IT040 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_18600 -8.3 -4.1 isopropylmalate isomerase compare
PS417_21565 -7.5 -5.5 flagellar basal body rod protein FlgC compare
PS417_19755 -7.3 -2.1 flagellar motor switch protein FliM compare
PS417_21575 -7.2 -7.1 chemotaxis protein compare
PS417_19650 -7.0 -4.8 chemotaxis protein CheW compare
PS417_19690 -6.8 -3.8 histidine kinase compare
PS417_23950 -6.7 -3.2 polynucleotide phosphorylase/polyadenylase compare
PS417_19800 -6.7 -2.7 flagellar motor switch protein FliG compare
PS417_00185 -6.2 -4.3 tryptophan synthase subunit beta compare
PS417_19665 -6.1 -4.7 flagellar motor protein MotD compare
PS417_19860 -5.9 -18.4 flagellar hook protein FlgL compare
PS417_23805 -5.8 -5.3 acetolactate synthase 3 regulatory subunit compare
PS417_18560 -5.8 -8.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_19790 -5.7 -5.0 ATP synthase compare
PS417_21585 -5.6 -10.9 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_23810 -5.4 -13.5 acetolactate synthase 3 catalytic subunit compare
PS417_19840 -5.3 -12.1 flagellar cap protein FliD compare
PS417_21595 -5.2 -4.7 flagellar biosynthesis protein FlgN compare
PS417_27040 -5.2 -3.6 3-phosphoglycerate dehydrogenase compare
PS417_18585 -5.2 -7.9 3-isopropylmalate dehydrogenase compare
PS417_19710 -5.1 -15.4 flagellar biosynthesis protein FlhA compare
PS417_21570 -5.1 -7.6 flagellar basal body rod protein FlgB compare
PS417_19765 -5.1 -12.1 flagellar hook-length control protein compare
PS417_05635 -5.0 -6.4 membrane protein compare
PS417_19850 -5.0 -10.6 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_25715 -4.9 -6.6 anthranilate phosphoribosyltransferase compare
PS417_23800 -4.9 -14.9 ketol-acid reductoisomerase compare
PS417_19885 -4.8 -3.9 flagellar basal body rod protein FlgG compare
PS417_02415 -4.8 -6.6 phosphoserine phosphatase compare
PS417_19835 -4.7 -1.9 flagellar biosynthesis protein FliS compare
PS417_08135 -4.6 -5.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_23110 -4.6 -11.7 2-isopropylmalate synthase compare
PS417_19735 -4.5 -5.3 flagellar biosynthesis protein FliQ compare
PS417_19745 -4.5 -8.1 flagellar assembly protein FliO compare
PS417_19795 -4.5 -14.3 flagellar assembly protein FliH compare
PS417_25725 -4.5 -12.2 anthranilate synthase component I compare
PS417_01640 -4.5 -7.5 histidine kinase compare
PS417_27135 -4.4 -1.3 glutamine synthetase compare
PS417_01635 -4.4 -7.2 nitrogen regulation protein NR(I) compare
PS417_19725 -4.4 -5.8 flagellar biosynthesis protein FlhB compare
PS417_27795 -4.3 -1.2 orotate phosphoribosyltransferase compare
PS417_17565 -4.2 -3.6 branched-chain amino acid aminotransferase compare
PS417_21555 -4.2 -10.6 flagellar hook protein FlgE compare
PS417_25720 -4.2 -5.8 anthranilate synthase component II compare
PS417_26740 -4.2 -10.1 homoserine acetyltransferase compare
PS417_25710 -4.2 -1.7 indole-3-glycerol-phosphate synthase compare
PS417_19740 -4.2 -9.2 flagellar biosynthesis protein flip compare
PS417_19870 -4.2 -5.2 flagellar rod assembly protein FlgJ compare
PS417_22520 -4.2 -2.3 histidine kinase compare
PS417_19785 -4.2 -4.9 flagellar biogenesis protein compare
PS417_19695 -4.2 -7.9 flagellar biosynthesis sigma factor compare
PS417_23995 -4.2 -1.2 preprotein translocase subunit SecG compare
PS417_19805 -4.1 -4.0 flagellar M-ring protein FliF compare
PS417_19730 -4.1 -3.1 flagellar biosynthesis protein FliR compare
PS417_06375 -4.0 -1.1 deoxycytidine triphosphate deaminase compare
PS417_13855 -4.0 -1.6 acetyl-CoA acetyltransferase compare
PS417_24745 -4.0 -4.4 gamma-glutamyl phosphate reductase compare
PS417_19825 -4.0 -11.0 ATPase AAA compare
PS417_19880 -3.9 -6.0 flagellar basal body L-ring protein compare
PS417_26745 -3.9 -8.3 methionine biosynthesis protein MetW compare
PS417_00180 -3.9 -2.3 tryptophan synthase subunit alpha compare
PS417_04415 -3.9 -7.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_21480 -3.9 -1.8 23S rRNA pseudouridylate synthase compare
PS417_01580 -3.8 -1.5 imidazole glycerol phosphate synthase compare
PS417_19865 -3.8 -10.9 flagellar hook protein FlgK compare
PS417_01855 -3.8 -3.5 phosphoribosyl-AMP cyclohydrolase compare
PS417_21125 -3.8 -9.4 phosphoadenosine phosphosulfate reductase compare
PS417_19675 -3.8 -4.5 chemotaxis protein CheY compare
PS417_06200 -3.7 -7.7 protein-PII uridylyltransferase compare
PS417_19655 -3.7 -2.7 chemotaxis protein CheW compare
PS417_26890 -3.6 -7.0 dihydroxy-acid dehydratase compare
PS417_27195 -3.6 -1.4 N-acetylglutamate synthase compare
PS417_27640 -3.6 -1.5 TetR family transcriptional regulator compare
PS417_01565 -3.5 -4.5 imidazole glycerol phosphate synthase compare
PS417_01575 -3.5 -5.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_22450 -3.5 -1.7 ATP-dependent DNA helicase RuvA compare
PS417_19660 -3.5 -3.2 cobalamin biosynthesis protein CobQ compare
PS417_01955 -3.4 -9.0 peptidase compare
PS417_04420 -3.4 -8.6 histidinol dehydrogenase compare
PS417_18530 -3.4 -6.3 O-succinylhomoserine sulfhydrylase compare
PS417_21390 -3.3 -4.0 hypothetical protein compare
PS417_19705 -3.3 -2.4 flagellar biosynthesis regulator FlhF compare
PS417_23545 -3.2 -1.8 gamma-glutamyl kinase compare
PS417_02510 -3.2 -5.1 ATP phosphoribosyltransferase regulatory subunit compare
PS417_21070 -3.2 -3.2 aconitate hydratase compare
PS417_01850 -3.1 -3.6 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_18540 -3.1 -4.4 colicin V production CvpA compare
PS417_21630 -3.1 -2.8 magnesium transporter compare
PS417_05595 -3.1 -7.7 ornithine carbamoyltransferase compare
PS417_20105 -2.9 -17.4 glycosyl transferase compare
PS417_07560 -2.9 -2.5 universal stress protein UspA compare
PS417_13180 -2.9 -5.8 AraC family transcriptional regulator compare
PS417_02280 -2.9 -1.8 GlcNAc-PI de-N-acetylase compare
PS417_09085 -2.9 -1.4 hypothetical protein compare
PS417_28220 -2.8 -2.0 LysR family transcriptional regulator compare
PS417_01560 -2.8 -2.7 imidazoleglycerol-phosphate dehydratase compare
PS417_02485 -2.8 -5.6 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_23770 -2.7 -1.6 exodeoxyribonuclease V subunit alpha compare
PS417_03165 -2.7 -4.3 hypothetical protein compare
PS417_27870 -2.6 -3.2 ATP-dependent DNA helicase RecG compare
PS417_04650 -2.6 -1.0 D-alanine--D-alanine ligase compare
PS417_21510 -2.6 -2.6 histidine kinase compare
PS417_14940 -2.6 -2.1 LysR family transcriptional regulator compare
PS417_20985 -2.6 -2.5 porin compare
PS417_27800 -2.6 -2.5 exodeoxyribonuclease III compare
PS417_26730 -2.6 -1.0 pyrroline-5-carboxylate reductase compare
PS417_15495 -2.5 -1.3 FAD-dependent oxidoreductase compare
PS417_16490 -2.5 -1.6 cell division protein FtsK compare
PS417_14065 -2.5 -9.5 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_21430 -2.5 -2.3 3-oxoacyl-ACP synthase compare
PS417_20635 -2.4 -1.2 ABC transporter ATP-binding protein compare
PS417_26530 -2.4 -1.6 hypothetical protein compare
PS417_18595 -2.4 -1.7 3-isopropylmalate dehydratase compare
PS417_17550 -2.4 -4.3 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) compare
PS417_08540 -2.4 -2.6 RNA helicase compare
PS417_19830 -2.4 -2.7 flagellar assembly protein FliT compare
PS417_24710 -2.3 -5.7 lipoprotein compare
PS417_02560 -2.3 -2.1 23S rRNA methyltransferase compare
PS417_20785 -2.3 -2.8 transcriptional regulator compare
PS417_02210 -2.3 -4.1 diguanylate cyclase compare
PS417_16990 -2.2 -6.4 acyl-CoA dehydrogenase compare
PS417_21655 -2.2 -1.2 aspartate kinase compare
PS417_05535 -2.2 -2.3 Fis family transcriptional regulator compare
PS417_03260 -2.2 -1.5 5S ribosomal RNA compare
PS417_27315 -2.2 -1.5 hypothetical protein compare
PS417_22445 -2.2 -4.3 ATP-dependent DNA helicase RuvB compare
PS417_04380 -2.2 -1.3 ABC transporter permease compare
PS417_20775 -2.2 -3.4 coproporphyrinogen III oxidase compare
PS417_20610 -2.1 -1.7 hypothetical protein compare
PS417_02000 -2.1 -8.1 glutamate synthase compare
PS417_01605 -2.0 -1.5 phosphoglycerate mutase compare
PS417_10675 -2.0 -1.2 TetR family transcriptional regulator compare
PS417_05975 -2.0 -1.0 chemotaxis protein CheW compare
PS417_25780 -2.0 -2.7 molecular chaperone DnaJ compare
PS417_19820 -2.0 -4.3 histidine kinase compare
PS417_17545 -2.0 -3.0 2-oxoisovalerate dehydrogenase compare
PS417_03875 -2.0 -2.8 membrane protein compare
PS417_06680 -1.9 -7.1 nuclease PIN compare
PS417_08195 -1.9 -6.3 hypothetical protein compare
PS417_02005 -1.9 -8.3 glutamate synthase compare
PS417_18570 -1.9 -3.8 peptidoglycan-binding protein compare
PS417_20160 -1.9 -2.0 cysteine synthase compare
PS417_19645 -1.9 -2.5 chemotaxis protein compare
PS417_23775 -1.9 -1.7 exodeoxyribonuclease V subunit beta compare
PS417_27865 -1.8 -3.0 LysR family transcriptional regulator compare
PS417_20095 -1.8 -7.7 hypothetical protein compare
PS417_16465 -1.8 -7.4 sirohydrochlorin ferrochelatase compare
PS417_25225 -1.8 -2.1 MFS transporter compare
PS417_12310 -1.8 -6.7 methionine synthase compare
PS417_20715 -1.8 -2.5 cytochrome Cbb3 compare
PS417_05985 -1.8 -2.3 chemotaxis protein CheY compare
PS417_08580 -1.8 -7.3 histidine kinase compare
PS417_23105 -1.7 -1.7 hypothetical protein compare
PS417_27300 -1.7 -0.9 cell division protein ZapA compare
PS417_20025 -1.7 -1.7 alpha-ribazole phosphatase compare
PS417_03560 -1.7 -1.6 GTP-binding protein compare
PS417_07620 -1.7 -2.1 beta-hexosaminidase compare
PS417_13850 -1.7 -4.7 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) compare
PS417_20090 -1.7 -5.9 DegT/DnrJ/EryC1/StrS aminotransferase compare
PS417_27305 -1.6 -5.8 5-formyltetrahydrofolate cyclo-ligase compare
PS417_12290 -1.6 -6.2 sulfite reductase compare
PS417_21560 -1.6 -2.1 flagellar basal body rod modification protein FlgD compare
PS417_27585 -1.6 -1.8 diaminopimelate epimerase compare
PS417_20700 -1.6 -6.9 cbb3-type cytochrome c oxidase subunit I compare
PS417_08185 -1.6 -3.3 glycosyl transferase compare
PS417_07170 -1.6 -3.1 hypothetical protein compare
PS417_04375 -1.6 -2.2 ABC transporter ATP-binding protein compare
PS417_01570 -1.6 -1.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_23915 -1.6 -4.1 pantoate--beta-alanine ligase compare
PS417_20650 -1.6 -6.0 hypothetical protein compare
PS417_26990 -1.6 -0.9 RNA pyrophosphohydrolase compare
PS417_20705 -1.5 -3.1 cbb3-type cytochrome c oxidase subunit II compare
PS417_03830 -1.5 -7.0 protein disaggregation chaperone compare
PS417_04595 -1.5 -2.1 cell division protein MraZ compare
PS417_23485 -1.5 -2.9 antibiotic biosynthesis monooxygenase compare
PS417_06895 -1.5 -3.0 DNA-binding protein compare
PS417_18690 -1.5 -3.1 aromatic amino acid aminotransferase compare
PS417_08090 -1.5 -1.0 3-oxoacyl-ACP reductase compare
PS417_08335 -1.5 -1.4 hypothetical protein compare
PS417_01290 -1.5 -1.5 ADP-ribose diphosphatase compare
PS417_14755 -1.5 -1.7 UV damage repair endonuclease UvdE compare
PS417_21065 -1.5 -1.7 3-methylitaconate isomerase compare
PS417_08205 -1.5 -2.2 acetyltransferase compare
PS417_08190 -1.4 -7.0 membrane protein compare
PS417_22815 -1.4 -5.3 permease compare
PS417_02440 -1.4 -2.3 flagellar motor protein MotB compare
PS417_02865 -1.4 -2.1 peptidase compare
PS417_22780 -1.4 -2.6 XRE family transcriptional regulator compare
PS417_01620 -1.4 -2.1 preprotein translocase subunit SecB compare
PS417_04055 -1.4 -3.4 peptide transporter compare
PS417_26565 -1.4 -2.3 LysR family transcriptional regulator compare
PS417_06845 -1.4 -1.5 lipoprotein compare
PS417_02980 -1.4 -1.1 chemotaxis protein compare
PS417_07470 -1.4 -1.4 hypothetical protein compare
PS417_19620 -1.4 -2.1 hypothetical protein compare
PS417_27815 -1.4 -1.3 hypothetical protein compare
PS417_01920 -1.3 -0.9 ATP-dependent protease subunit HslV compare
PS417_17560 -1.3 -2.5 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) compare
PS417_26510 -1.3 -6.1 5,10-methylenetetrahydrofolate reductase compare
PS417_05165 -1.3 -1.9 cytosol aminopeptidase compare


Specific Phenotypes

For 1 genes in this experiment