Experiment set19IT040 for Pseudomonas simiae WCS417

Compare to:

Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most detrimental genes:

  gene name fitness t score description  
PS417_23900 +2.6 9.3 poly(A) polymerase compare
PS417_15705 +2.5 3.6 nitrate reductase compare
PS417_15695 +2.3 4.8 molybdenum cofactor biosynthesis protein A compare
PS417_15710 +1.8 2.6 nitrate reductase compare
PS417_24265 +1.6 5.1 ABC transporter ATP-binding protein compare
PS417_22550 +1.5 3.8 ATP-binding protein compare
PS417_28515 +1.4 3.8 16S rRNA methyltransferase compare
PS417_02555 +1.4 9.2 exoribonuclease R compare
PS417_06095 +1.3 2.5 energy transducer TonB compare
PS417_25270 +1.2 2.7 NrdR family transcriptional regulator compare
PS417_04915 +1.2 2.7 glutamine ABC transporter ATP-binding protein compare
PS417_19065 +1.2 1.6 monooxygenase compare
PS417_17780 +1.1 1.2 Ais protein compare
PS417_04910 +1.1 6.0 amino acid ABC transporter permease compare
PS417_18070 +1.1 1.6 general secretion pathway protein GspH compare
PS417_04365 +1.0 1.4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_18390 +1.0 3.4 LacI family transcriptional regulator compare
PS417_22935 +1.0 1.6 hypothetical protein compare
PS417_20245 +1.0 3.7 copper resistance protein CopD compare
PS417_18400 +1.0 2.0 D-ribose ABC transporter, ATPase component RbsA (from data) compare
PS417_10710 +0.9 1.2 GNAT family acetyltransferase compare
PS417_21710 +0.9 2.1 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
PS417_06685 +0.9 1.1 beta-ketoadipyl CoA thiolase compare
PS417_16735 +0.9 2.8 aldehyde dehydrogenase compare
PS417_04905 +0.9 2.3 amino acid ABC transporter permease compare
PS417_19975 +0.9 2.2 hypothetical protein compare
PS417_15090 +0.9 0.5 hypothetical protein compare
PS417_14175 +0.9 1.8 ArsC family transcriptional regulator compare
PS417_22115 +0.9 1.6 transcriptional regulator compare
PS417_20825 +0.9 1.5 drug:proton antiporter compare
PS417_02370 +0.9 1.1 ADP-ribose pyrophosphatase compare
PS417_06635 +0.8 0.9 ferredoxin compare
PS417_02985 +0.8 6.1 diguanylate cyclase compare
PS417_01270 +0.8 1.9 iron ABC transporter substrate-binding protein compare
PS417_21870 +0.8 1.7 glycerophosphodiester phosphodiesterase compare
PS417_26150 +0.8 3.1 acyltransferase compare
PS417_03785 +0.8 1.5 pilus assembly protein PilV compare
PS417_26875 +0.8 4.2 histidine kinase compare
PS417_25970 +0.8 3.7 diguanylate cyclase compare
PS417_26120 +0.8 1.1 hypothetical protein compare
PS417_23095 +0.8 0.9 exodeoxyribonuclease compare
PS417_07875 +0.8 1.0 hypothetical protein compare
PS417_13660 +0.8 1.7 AsnC family transcriptional regulator compare
PS417_15715 +0.8 2.2 nitrate reductase compare
PS417_17035 +0.8 1.4 Cro/Cl family transcriptional regulator compare
PS417_18455 +0.8 1.5 hypothetical protein compare
PS417_12935 +0.8 2.0 RNA polymerase sigma factor compare
PS417_27610 +0.8 4.7 hypothetical protein compare
PS417_26985 +0.8 5.2 phosphoenolpyruvate-protein phosphotransferase compare
PS417_19440 +0.8 2.5 purine permease compare
PS417_23205 +0.8 1.3 transcriptional regulator compare
PS417_15885 +0.8 1.2 GCN5 family acetyltransferase compare
PS417_04900 +0.8 2.9 amino acid ABC transporter substrate-binding protein compare
PS417_02045 +0.8 1.0 3-oxoacyl-ACP synthase compare
PS417_06615 +0.8 2.7 ABC transporter for branched-chain amino acids, substrate-binding component (from data) compare
PS417_27295 +0.8 2.6 hypothetical protein compare
PS417_09075 +0.8 3.4 chemotaxis protein compare
PS417_14200 +0.8 1.7 hypothetical protein compare
PS417_27055 +0.8 2.3 hypothetical protein compare
PS417_12765 +0.8 2.5 oxidoreductase compare
PS417_01945 +0.8 1.0 nuclease compare
PS417_10405 +0.7 1.0 filamentous hemagglutinin compare
PS417_19425 +0.7 0.8 allantoicase compare
PS417_19950 +0.7 2.7 ATP-dependent DNA helicase RecQ compare
PS417_23755 +0.7 1.5 membrane protein compare
PS417_00685 +0.7 2.0 hypothetical protein compare
PS417_28340 +0.7 1.1 hypothetical protein compare
PS417_00915 +0.7 3.0 aminotransferase compare
PS417_10425 +0.7 1.6 hypothetical protein compare
PS417_05710 +0.7 2.2 hypothetical protein compare
PS417_24895 +0.7 1.2 hypothetical protein compare
PS417_12525 +0.7 1.8 hypothetical protein compare
PS417_27605 +0.7 2.9 hypothetical protein compare
PS417_11810 +0.7 1.2 oxidoreductase compare
PS417_26815 +0.7 1.6 peptidase M16 compare
PS417_22175 +0.7 1.6 amino acid transporter LysE compare
PS417_25700 +0.7 2.0 cyclic AMP receptor protein compare
PS417_22315 +0.7 1.5 DNA-3-methyladenine glycosylase compare
PS417_02675 +0.7 1.7 ABC transporter ATP-binding protein compare
PS417_09695 +0.7 1.1 hydrolase compare
PS417_24030 +0.7 1.6 MFS transporter compare
PS417_08825 +0.7 1.6 TetR family transcriptional regulator compare
PS417_27045 +0.7 1.4 ATPase compare
PS417_14840 +0.7 1.4 abortive phage infection protein compare
PS417_00550 +0.6 0.8 hypothetical protein compare
PS417_11770 +0.6 1.5 pyruvate dehydrogenase compare
PS417_27000 +0.6 2.0 membrane protein compare
PS417_15745 +0.6 1.3 lipid carrier protein compare
PS417_20840 +0.6 2.7 hypothetical protein compare
PS417_03310 +0.6 1.8 carbonate dehydratase compare
PS417_19560 +0.6 3.8 amino acid ABC transporter substrate-binding protein compare
PS417_11735 +0.6 2.1 methionine gamma-lyase compare
PS417_23505 +0.6 0.9 cell division protein DedD compare
PS417_21360 +0.6 0.9 termination factor Rho compare
PS417_18425 +0.6 1.2 sporulation protein compare
PS417_06150 +0.6 1.9 SAM-dependent methlyltransferase compare
PS417_00545 +0.6 1.0 hypothetical protein compare
PS417_16710 +0.6 1.3 hydrolase compare
PS417_18640 +0.6 2.1 hydrolase compare
PS417_22570 +0.6 0.7 H-NS histone compare
PS417_13645 +0.6 1.5 ABC transporter compare
PS417_00065 +0.6 1.1 3-methyladenine DNA glycosylase compare
PS417_27655 +0.6 3.0 LysR family transcriptional regulator compare
PS417_26265 +0.6 1.2 hypothetical protein compare
PS417_20310 +0.6 1.1 hypothetical protein compare
PS417_04985 +0.6 1.5 ketosteroid isomerase compare
PS417_02680 +0.6 1.8 hypothetical protein compare
PS417_12145 +0.6 2.4 acetoacetyl-CoA synthetase compare
PS417_09440 +0.6 1.1 MerR family transcriptional regulator compare
PS417_04675 +0.6 2.7 deoxyribonuclease compare
PS417_06785 +0.6 1.8 NADH:flavin oxidoreductase compare
PS417_18495 +0.6 1.3 hypothetical protein compare
PS417_00085 +0.6 0.9 16S rRNA methyltransferase compare
PS417_21475 +0.6 1.5 HAD family hydrolase compare
PS417_21315 +0.6 2.1 hydroxyacid dehydrogenase compare
PS417_23160 +0.6 1.5 50S rRNA methyltransferase compare
PS417_00905 +0.6 2.7 histidine kinase compare
PS417_08435 +0.6 0.7 pilus assembly protein PilZ compare
PS417_26580 +0.6 2.1 malonate transporter compare
PS417_07270 +0.6 2.1 LysR family transcriptional regulator compare
PS417_12910 +0.6 1.6 alanine racemase compare
PS417_26840 +0.6 1.7 TetR family transcriptional regulator compare
PS417_16970 +0.6 3.1 membrane protein compare
PS417_12455 +0.6 0.9 hydrolase compare
PS417_03795 +0.6 2.7 pilus assembly protein PilX compare
PS417_03085 +0.6 1.6 type II secretion system protein F compare
PS417_02760 +0.6 1.5 AraC family transcriptional regulator compare
PS417_11900 +0.6 4.1 conjugal transfer protein TraR compare
PS417_21380 +0.6 1.6 GntR family transcriptional regulator compare
PS417_02335 +0.6 2.1 multidrug DMT transporter compare
PS417_03510 +0.6 1.3 type III secretion system negative regulatory protein RspV compare
PS417_05105 +0.6 1.6 membrane protein compare
PS417_17615 +0.6 1.8 leucyl-tRNA synthetase compare
PS417_15975 +0.6 0.8 glutamate carboxypeptidase compare
PS417_26050 +0.6 1.8 response regulator compare
PS417_23620 +0.6 1.9 epimerase compare
PS417_10015 +0.6 0.7 hypothetical protein compare
PS417_00930 +0.6 1.9 ABC transporter permease compare
PS417_08405 +0.6 3.1 esterase compare
PS417_10870 +0.6 1.3 GABA permease compare
PS417_11965 +0.5 1.3 GCN5 family acetyltransferase compare
PS417_10335 +0.5 1.2 peroxiredoxin compare
PS417_15690 +0.5 1.9 ribonucleoside-triphosphate reductase compare
PS417_08130 +0.5 1.0 aspartate aminotransferase compare
PS417_20535 +0.5 2.5 peptidylprolyl isomerase compare
PS417_05965 +0.5 1.9 chemotaxis protein CheW compare
PS417_19095 +0.5 1.1 hypothetical protein compare
PS417_01080 +0.5 2.2 acyl-CoA dehydrogenase compare
PS417_22325 +0.5 2.8 amino acid APC transporter compare
PS417_24655 +0.5 1.9 hypothetical protein compare
PS417_17765 +0.5 1.7 iron ABC transporter permease compare
PS417_26645 +0.5 1.1 chemotaxis protein compare
PS417_18470 +0.5 1.8 hypothetical protein compare
PS417_26245 +0.5 1.7 hypothetical protein compare
PS417_24650 +0.5 1.1 membrane protein compare
PS417_02190 +0.5 1.9 hypothetical protein compare
PS417_27230 +0.5 1.9 membrane protein implicated in regulation of membrane protease activity compare
PS417_08320 +0.5 1.5 metal-chelation protein CHAD compare
PS417_00620 +0.5 1.8 GntR family transcriptional regulator compare
PS417_17795 +0.5 0.8 ABC transporter permease compare
PS417_16845 +0.5 1.6 monovalent cation/H+ antiporter subunit E compare
PS417_11520 +0.5 1.7 Sorbitol dehydrogenase (EC 1.1.1.14) (from data) compare
PS417_21345 +0.5 2.2 GNAT family acetyltransferase compare
PS417_19605 +0.5 0.6 hypothetical protein compare
PS417_11440 +0.5 1.0 hypothetical protein compare
PS417_05140 +0.5 1.2 dipicolinate synthase compare
PS417_07755 +0.5 3.2 hypothetical protein compare
PS417_05990 +0.5 1.6 diguanylate cyclase compare
PS417_14850 +0.5 1.6 hypothetical protein compare
PS417_26145 +0.5 1.7 hypothetical protein compare
PS417_17945 +0.5 0.6 hypothetical protein compare
PS417_17215 +0.5 0.8 peptidylprolyl isomerase compare
PS417_08415 +0.5 3.0 hypothetical protein compare
PS417_07410 +0.5 1.1 hypothetical protein compare
PS417_20210 +0.5 2.5 membrane protein compare
PS417_11425 +0.5 1.7 transcriptional regulator compare
PS417_11345 +0.5 1.4 membrane protein compare
PS417_06985 +0.5 1.6 metal ABC transporter ATPase compare
PS417_05860 +0.5 1.7 hypothetical protein compare
PS417_05100 +0.5 1.2 RNA polymerase sigma factor compare
PS417_27915 +0.5 1.4 type VI secretion system protein ImpM compare
PS417_02655 +0.5 3.1 amino acid ABC transporter substrate-binding protein compare
PS417_07485 +0.5 2.4 hypothetical protein compare
PS417_03940 +0.5 1.5 membrane protein compare
PS417_14610 +0.5 2.5 lysine transporter LysE compare
PS417_26390 +0.5 0.7 acyltransferase compare
PS417_07015 +0.5 1.8 helicase compare
PS417_07980 +0.5 1.7 twitching motility protein PilT compare
PS417_13490 +0.5 0.9 hypothetical protein compare
PS417_14810 +0.5 1.2 Fosmidomycin resistance protein compare
PS417_17455 +0.5 1.6 cytochrome C compare
PS417_23415 +0.5 1.9 AraC family transcriptional regulator compare
PS417_21240 +0.5 1.7 hypothetical protein compare
PS417_06445 +0.5 1.1 iron-siderophore ABC transporter permease compare
PS417_01375 +0.5 1.0 hypothetical protein compare
PS417_10490 +0.5 1.4 delta-aminolevulinic acid dehydratase compare
PS417_19135 +0.5 0.9 DeoR faimly transcriptional regulator compare
PS417_00190 +0.5 1.6 LysR family transcriptional regulator compare
PS417_20170 +0.5 1.2 hypothetical protein compare
PS417_10070 +0.5 2.3 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment