Experiment set19IT038 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_18600 -8.4 -3.3 isopropylmalate isomerase compare
PS417_17565 -7.6 -3.0 branched-chain amino acid aminotransferase compare
PS417_21565 -7.2 -3.8 flagellar basal body rod protein FlgC compare
PS417_18585 -7.1 -4.9 3-isopropylmalate dehydrogenase compare
PS417_18595 -7.1 -4.2 3-isopropylmalate dehydratase compare
PS417_01855 -7.1 -2.7 phosphoribosyl-AMP cyclohydrolase compare
PS417_23950 -6.9 -2.7 polynucleotide phosphorylase/polyadenylase compare
PS417_01575 -6.9 -4.2 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_21575 -6.8 -6.4 chemotaxis protein compare
PS417_06200 -6.3 -6.2 protein-PII uridylyltransferase compare
PS417_23545 -6.0 -2.7 gamma-glutamyl kinase compare
PS417_18560 -5.9 -8.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_19850 -5.9 -12.4 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_01640 -5.8 -4.0 histidine kinase compare
PS417_04420 -5.7 -10.2 histidinol dehydrogenase compare
PS417_04415 -5.7 -8.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_19840 -5.6 -14.9 flagellar cap protein FliD compare
PS417_02510 -5.6 -6.2 ATP phosphoribosyltransferase regulatory subunit compare
PS417_25720 -5.6 -7.0 anthranilate synthase component II compare
PS417_27040 -5.5 -3.1 3-phosphoglycerate dehydrogenase compare
PS417_21570 -5.4 -5.0 flagellar basal body rod protein FlgB compare
PS417_01635 -5.3 -6.9 nitrogen regulation protein NR(I) compare
PS417_19765 -5.3 -7.4 flagellar hook-length control protein compare
PS417_25725 -5.3 -14.3 anthranilate synthase component I compare
PS417_21585 -5.3 -9.4 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_23800 -5.2 -12.5 ketol-acid reductoisomerase compare
PS417_00185 -5.2 -4.0 tryptophan synthase subunit beta compare
PS417_01565 -5.1 -4.2 imidazole glycerol phosphate synthase compare
PS417_19725 -5.1 -6.1 flagellar biosynthesis protein FlhB compare
PS417_19660 -5.1 -4.8 cobalamin biosynthesis protein CobQ compare
PS417_19885 -5.1 -3.2 flagellar basal body rod protein FlgG compare
PS417_19785 -5.0 -4.0 flagellar biogenesis protein compare
PS417_23805 -5.0 -5.1 acetolactate synthase 3 regulatory subunit compare
PS417_19860 -5.0 -16.4 flagellar hook protein FlgL compare
PS417_19755 -5.0 -2.0 flagellar motor switch protein FliM compare
PS417_24745 -5.0 -2.4 gamma-glutamyl phosphate reductase compare
PS417_19730 -4.9 -3.4 flagellar biosynthesis protein FliR compare
PS417_23110 -4.9 -9.3 2-isopropylmalate synthase compare
PS417_26745 -4.8 -5.1 methionine biosynthesis protein MetW compare
PS417_19835 -4.8 -1.6 flagellar biosynthesis protein FliS compare
PS417_21390 -4.8 -5.1 hypothetical protein compare
PS417_05975 -4.8 -1.1 chemotaxis protein CheW compare
PS417_19690 -4.7 -3.6 histidine kinase compare
PS417_19825 -4.6 -15.2 ATPase AAA compare
PS417_19650 -4.6 -4.8 chemotaxis protein CheW compare
PS417_19880 -4.6 -9.6 flagellar basal body L-ring protein compare
PS417_27795 -4.6 -1.0 orotate phosphoribosyltransferase compare
PS417_23810 -4.5 -9.5 acetolactate synthase 3 catalytic subunit compare
PS417_21555 -4.5 -12.6 flagellar hook protein FlgE compare
PS417_05635 -4.4 -6.0 membrane protein compare
PS417_25710 -4.4 -1.4 indole-3-glycerol-phosphate synthase compare
PS417_19710 -4.4 -14.6 flagellar biosynthesis protein FlhA compare
PS417_19740 -4.4 -5.9 flagellar biosynthesis protein flip compare
PS417_26740 -4.4 -9.4 homoserine acetyltransferase compare
PS417_23995 -4.3 -1.0 preprotein translocase subunit SecG compare
PS417_01570 -4.3 -1.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_19795 -4.3 -13.0 flagellar assembly protein FliH compare
PS417_19865 -4.2 -12.7 flagellar hook protein FlgK compare
PS417_19800 -4.2 -2.6 flagellar motor switch protein FliG compare
PS417_19695 -4.2 -9.0 flagellar biosynthesis sigma factor compare
PS417_19705 -4.2 -2.9 flagellar biosynthesis regulator FlhF compare
PS417_19675 -4.1 -5.6 chemotaxis protein CheY compare
PS417_19805 -4.1 -4.5 flagellar M-ring protein FliF compare
PS417_01580 -4.1 -1.3 imidazole glycerol phosphate synthase compare
PS417_21595 -4.0 -4.7 flagellar biosynthesis protein FlgN compare
PS417_02415 -4.0 -4.9 phosphoserine phosphatase compare
PS417_18530 -4.0 -5.4 O-succinylhomoserine sulfhydrylase compare
PS417_19745 -3.9 -6.1 flagellar assembly protein FliO compare
PS417_01955 -3.8 -9.0 peptidase compare
PS417_19735 -3.8 -4.3 flagellar biosynthesis protein FliQ compare
PS417_27195 -3.8 -1.2 N-acetylglutamate synthase compare
PS417_19870 -3.7 -5.6 flagellar rod assembly protein FlgJ compare
PS417_22450 -3.6 -1.4 ATP-dependent DNA helicase RuvA compare
PS417_02210 -3.5 -7.2 diguanylate cyclase compare
PS417_19665 -3.5 -2.2 flagellar motor protein MotD compare
PS417_22620 -3.3 -4.7 pyruvate kinase compare
PS417_18540 -3.3 -4.3 colicin V production CvpA compare
PS417_28220 -3.3 -1.8 LysR family transcriptional regulator compare
PS417_27800 -3.2 -2.2 exodeoxyribonuclease III compare
PS417_00180 -3.2 -2.5 tryptophan synthase subunit alpha compare
PS417_01850 -3.2 -4.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_03165 -3.2 -4.4 hypothetical protein compare
PS417_03380 -3.1 -1.4 hypothetical protein compare
PS417_25715 -3.0 -3.5 anthranilate phosphoribosyltransferase compare
PS417_02280 -2.9 -2.2 GlcNAc-PI de-N-acetylase compare
PS417_23770 -2.9 -1.4 exodeoxyribonuclease V subunit alpha compare
PS417_08540 -2.9 -2.3 RNA helicase compare
PS417_20105 -2.9 -18.1 glycosyl transferase compare
PS417_08125 -2.8 -0.6 prephenate dehydratase compare
PS417_13180 -2.8 -4.0 AraC family transcriptional regulator compare
PS417_04650 -2.8 -0.9 D-alanine--D-alanine ligase compare
PS417_05595 -2.8 -6.0 ornithine carbamoyltransferase compare
PS417_27865 -2.7 -2.9 LysR family transcriptional regulator compare
PS417_26730 -2.7 -0.9 pyrroline-5-carboxylate reductase compare
PS417_02975 -2.7 -3.6 3-dehydroquinate dehydratase compare
PS417_23915 -2.7 -4.3 pantoate--beta-alanine ligase compare
PS417_17215 -2.7 -3.1 peptidylprolyl isomerase compare
PS417_27245 -2.6 -4.3 aminotransferase DegT compare
PS417_14065 -2.6 -8.1 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_12855 -2.6 -4.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_01290 -2.6 -1.8 ADP-ribose diphosphatase compare
PS417_01915 -2.5 -0.8 ATP-dependent protease ATP-binding subunit HslU compare
PS417_22520 -2.5 -2.0 histidine kinase compare
PS417_00755 -2.5 -0.8 biofilm PGA synthesis protein PgaD compare
PS417_20985 -2.5 -2.2 porin compare
PS417_08135 -2.4 -4.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_20160 -2.4 -3.9 cysteine synthase compare
PS417_25225 -2.4 -2.0 MFS transporter compare
PS417_18690 -2.4 -3.5 aromatic amino acid aminotransferase compare
PS417_06945 -2.4 -1.2 membrane protein compare
PS417_20610 -2.4 -1.6 hypothetical protein compare
PS417_00175 -2.4 -1.2 CigR compare
PS417_21125 -2.4 -7.9 phosphoadenosine phosphosulfate reductase compare
PS417_02485 -2.3 -4.2 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_14940 -2.3 -1.7 LysR family transcriptional regulator compare
PS417_15495 -2.3 -1.1 FAD-dependent oxidoreductase compare
PS417_09085 -2.3 -1.1 hypothetical protein compare
PS417_13855 -2.2 -1.2 acetyl-CoA acetyltransferase compare
PS417_27870 -2.2 -2.9 ATP-dependent DNA helicase RecG compare
PS417_12310 -2.2 -8.5 methionine synthase compare
PS417_22375 -2.2 -0.8 cold-shock protein compare
PS417_20650 -2.2 -8.6 hypothetical protein compare
PS417_16555 -2.1 -1.8 cupin compare
PS417_19830 -2.1 -2.2 flagellar assembly protein FliT compare
PS417_23910 -2.1 -5.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PS417_17550 -2.1 -3.4 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) compare
PS417_26890 -2.1 -3.3 dihydroxy-acid dehydratase compare
PS417_27300 -2.1 -0.8 cell division protein ZapA compare
PS417_21065 -2.1 -1.7 3-methylitaconate isomerase compare
PS417_19655 -2.1 -1.5 chemotaxis protein CheW compare
PS417_17545 -2.0 -4.1 2-oxoisovalerate dehydrogenase compare
PS417_27815 -2.0 -1.6 hypothetical protein compare
PS417_18570 -2.0 -3.6 peptidoglycan-binding protein compare
PS417_19790 -1.9 -2.5 ATP synthase compare
PS417_17070 -1.9 -1.9 RNA polymerase subunit sigma-24 compare
PS417_24710 -1.9 -7.3 lipoprotein compare
PS417_02000 -1.9 -9.7 glutamate synthase compare
PS417_20095 -1.9 -7.9 hypothetical protein compare
PS417_12290 -1.9 -4.8 sulfite reductase compare
PS417_06895 -1.8 -3.1 DNA-binding protein compare
PS417_21430 -1.8 -1.7 3-oxoacyl-ACP synthase compare
PS417_02805 -1.8 -1.7 urease subunit gamma compare
PS417_26990 -1.8 -0.8 RNA pyrophosphohydrolase compare
PS417_23485 -1.8 -2.8 antibiotic biosynthesis monooxygenase compare
PS417_06600 -1.8 -1.0 leucine/isoleucine/valine transporter ATP-binding subunit compare
PS417_07565 -1.8 -1.8 hypothetical protein compare
PS417_23150 -1.8 -2.3 Cro/Cl family transcriptional regulator compare
PS417_21070 -1.8 -1.9 aconitate hydratase compare
PS417_13850 -1.8 -2.8 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) compare
PS417_22445 -1.8 -2.6 ATP-dependent DNA helicase RuvB compare
PS417_19820 -1.7 -4.0 histidine kinase compare
PS417_06375 -1.7 -0.7 deoxycytidine triphosphate deaminase compare
PS417_10405 -1.7 -1.0 filamentous hemagglutinin compare
PS417_24835 -1.7 -4.0 hypothetical protein compare
PS417_23775 -1.7 -2.0 exodeoxyribonuclease V subunit beta compare
PS417_04585 -1.7 -1.6 hypothetical protein compare
PS417_16465 -1.7 -6.0 sirohydrochlorin ferrochelatase compare
PS417_02005 -1.6 -7.0 glutamate synthase compare
PS417_17560 -1.6 -1.8 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) compare
PS417_02950 -1.6 -3.0 tRNA-dihydrouridine synthase B compare
PS417_18250 -1.6 -2.7 chemotaxis protein compare
PS417_07575 -1.6 -3.0 multifunctional fatty acid oxidation complex subunit alpha compare
PS417_14655 -1.6 -1.1 lysine transporter LysE compare
PS417_27615 -1.6 -5.0 ammonia channel protein compare
PS417_16990 -1.6 -4.8 acyl-CoA dehydrogenase compare
PS417_20090 -1.6 -5.6 DegT/DnrJ/EryC1/StrS aminotransferase compare
PS417_14980 -1.5 -1.0 universal stress protein UspA compare
PS417_05985 -1.5 -2.0 chemotaxis protein CheY compare
PS417_24155 -1.5 -1.8 ATP-binding protein compare
PS417_08195 -1.5 -5.2 hypothetical protein compare
PS417_08170 -1.5 -6.0 capsular biosynthesis protein compare
PS417_27520 -1.5 -2.0 uroporphyrin-III methyltransferase compare
PS417_11760 -1.5 -2.7 Fis family transcriptional regulator compare
PS417_19645 -1.5 -2.4 chemotaxis protein compare
PS417_16510 -1.5 -2.6 Clp protease ClpX compare
PS417_02865 -1.5 -2.5 peptidase compare
PS417_08230 -1.4 -1.4 lipopolysaccharide biosynthesis protein RfbH compare
PS417_20340 -1.4 -1.2 hypothetical protein compare
PS417_07620 -1.4 -1.7 beta-hexosaminidase compare
PS417_16715 -1.4 -1.5 DoxX family protein compare
PS417_11055 -1.4 -1.5 AraC family transcriptional regulator compare
PS417_21625 -1.4 -0.9 DNA-binding protein compare
PS417_21630 -1.4 -1.4 magnesium transporter compare
PS417_08580 -1.4 -3.4 histidine kinase compare
PS417_27305 -1.4 -4.6 5-formyltetrahydrofolate cyclo-ligase compare
PS417_24135 -1.4 -1.7 hypothetical protein compare
PS417_18070 -1.4 -0.9 general secretion pathway protein GspH compare
PS417_24705 -1.4 -2.0 D-alanyl-D-alanine carboxypeptidase compare
PS417_24355 -1.4 -1.9 MFS transporter compare
PS417_03830 -1.4 -7.4 protein disaggregation chaperone compare
PS417_18545 -1.4 -1.8 cell division protein compare
PS417_08185 -1.4 -2.1 glycosyl transferase compare
PS417_21560 -1.3 -1.8 flagellar basal body rod modification protein FlgD compare
PS417_27135 -1.3 -0.7 glutamine synthetase compare
PS417_08335 -1.3 -1.3 hypothetical protein compare
PS417_07940 -1.3 -2.2 hypothetical protein compare
PS417_19615 -1.3 -3.3 chemotaxis protein CheW compare
PS417_23380 -1.3 -2.1 cytochrome o ubiquinol oxidase subunit III compare
PS417_08190 -1.3 -6.8 membrane protein compare
PS417_10680 -1.3 -2.2 enoyl-CoA hydratase compare


Specific Phenotypes

For 1 genes in this experiment