Experiment set19IT037 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_19835 -4.9 -2.1 flagellar biosynthesis protein FliS compare
PS417_27795 -4.6 -1.4 orotate phosphoribosyltransferase compare
PS417_27195 -3.9 -1.6 N-acetylglutamate synthase compare
PS417_24745 -3.2 -4.7 gamma-glutamyl phosphate reductase compare
PS417_21430 -3.2 -2.5 3-oxoacyl-ACP synthase compare
PS417_02415 -3.1 -5.7 phosphoserine phosphatase compare
PS417_23770 -3.1 -1.9 exodeoxyribonuclease V subunit alpha compare
PS417_01580 -3.0 -2.2 imidazole glycerol phosphate synthase compare
PS417_26730 -2.9 -1.2 pyrroline-5-carboxylate reductase compare
PS417_21575 -2.8 -5.8 chemotaxis protein compare
PS417_19650 -2.7 -7.3 chemotaxis protein CheW compare
PS417_23810 -2.7 -9.1 acetolactate synthase 3 catalytic subunit compare
PS417_22520 -2.6 -2.3 histidine kinase compare
PS417_06375 -2.6 -1.1 deoxycytidine triphosphate deaminase compare
PS417_27865 -2.5 -3.1 LysR family transcriptional regulator compare
PS417_00185 -2.4 -3.6 tryptophan synthase subunit beta compare
PS417_02225 -2.3 -3.8 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_08135 -2.3 -4.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19690 -2.3 -4.8 histidine kinase compare
PS417_23545 -2.3 -2.0 gamma-glutamyl kinase compare
PS417_24155 -2.3 -1.6 ATP-binding protein compare
PS417_19675 -2.2 -4.4 chemotaxis protein CheY compare
PS417_00180 -2.2 -3.3 tryptophan synthase subunit alpha compare
PS417_25710 -2.2 -2.1 indole-3-glycerol-phosphate synthase compare
PS417_18310 -2.2 -2.1 hypothetical protein compare
PS417_27245 -2.1 -4.0 aminotransferase DegT compare
PS417_06680 -2.1 -8.5 nuclease PIN compare
PS417_22565 -2.1 -1.2 formyltetrahydrofolate deformylase compare
PS417_07560 -2.0 -2.3 universal stress protein UspA compare
PS417_22450 -2.0 -1.2 ATP-dependent DNA helicase RuvA compare
PS417_21480 -2.0 -1.9 23S rRNA pseudouridylate synthase compare
PS417_27800 -2.0 -3.3 exodeoxyribonuclease III compare
PS417_01855 -2.0 -3.3 phosphoribosyl-AMP cyclohydrolase compare
PS417_19860 -2.0 -12.5 flagellar hook protein FlgL compare
PS417_02280 -2.0 -2.5 GlcNAc-PI de-N-acetylase compare
PS417_21595 -1.9 -6.9 flagellar biosynthesis protein FlgN compare
PS417_18585 -1.8 -6.9 3-isopropylmalate dehydrogenase compare
PS417_02975 -1.8 -3.6 3-dehydroquinate dehydratase compare
PS417_06540 -1.8 -2.2 membrane protein compare
PS417_18560 -1.8 -7.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_19850 -1.8 -7.0 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_04420 -1.8 -6.8 histidinol dehydrogenase compare
PS417_19800 -1.8 -4.1 flagellar motor switch protein FliG compare
PS417_19840 -1.7 -9.7 flagellar cap protein FliD compare
PS417_27875 -1.7 -8.3 histidine kinase compare
PS417_25720 -1.7 -5.2 anthranilate synthase component II compare
PS417_06600 -1.6 -1.3 leucine/isoleucine/valine transporter ATP-binding subunit compare
PS417_19885 -1.6 -3.0 flagellar basal body rod protein FlgG compare
PS417_04650 -1.6 -0.7 D-alanine--D-alanine ligase compare
PS417_01095 -1.6 -1.6 amino acid ABC transporter ATP-binding protein compare
PS417_27040 -1.6 -3.1 3-phosphoglycerate dehydrogenase compare
PS417_19655 -1.6 -2.9 chemotaxis protein CheW compare
PS417_23805 -1.6 -2.5 acetolactate synthase 3 regulatory subunit compare
PS417_19660 -1.6 -5.1 cobalamin biosynthesis protein CobQ compare
PS417_05635 -1.6 -6.3 membrane protein compare
PS417_21585 -1.6 -9.1 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_08335 -1.5 -2.1 hypothetical protein compare
PS417_23995 -1.5 -0.9 preprotein translocase subunit SecG compare
PS417_27135 -1.5 -1.0 glutamine synthetase compare
PS417_19795 -1.5 -9.5 flagellar assembly protein FliH compare
PS417_18595 -1.5 -2.2 3-isopropylmalate dehydratase compare
PS417_21565 -1.5 -5.7 flagellar basal body rod protein FlgC compare
PS417_06370 -1.5 -1.4 cold-shock protein compare
PS417_22375 -1.5 -1.0 cold-shock protein compare
PS417_25725 -1.5 -9.2 anthranilate synthase component I compare
PS417_19880 -1.4 -5.4 flagellar basal body L-ring protein compare
PS417_18600 -1.4 -1.7 isopropylmalate isomerase compare
PS417_01635 -1.4 -5.3 nitrogen regulation protein NR(I) compare
PS417_08090 -1.4 -1.2 3-oxoacyl-ACP reductase compare
PS417_19765 -1.4 -7.8 flagellar hook-length control protein compare
PS417_19865 -1.4 -8.1 flagellar hook protein FlgK compare
PS417_02510 -1.4 -6.2 ATP phosphoribosyltransferase regulatory subunit compare
PS417_09725 -1.4 -6.3 transporter compare
PS417_05815 -1.4 -3.6 recombinase RecA compare
PS417_02720 -1.4 -1.1 TetR family transcriptional regulator compare
PS417_06200 -1.4 -5.9 protein-PII uridylyltransferase compare
PS417_04415 -1.4 -6.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_28070 -1.4 -5.5 phosphate ABC transporter ATP-binding protein compare
PS417_19735 -1.4 -4.4 flagellar biosynthesis protein FliQ compare
PS417_03080 -1.4 -1.5 hypothetical protein compare
PS417_03260 -1.4 -1.6 5S ribosomal RNA compare
PS417_19740 -1.4 -5.8 flagellar biosynthesis protein flip compare
PS417_15465 -1.4 -4.0 carboxynorspermidine decarboxylase compare
PS417_04585 -1.3 -1.2 hypothetical protein compare
PS417_21570 -1.3 -6.5 flagellar basal body rod protein FlgB compare
PS417_01850 -1.3 -2.6 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_02555 -1.3 -7.2 exoribonuclease R compare
PS417_23800 -1.3 -6.8 ketol-acid reductoisomerase compare
PS417_20985 -1.3 -1.6 porin compare
PS417_27425 -1.3 -5.1 exopolyphosphatase compare
PS417_04385 -1.3 -2.4 organic solvent ABC transporter substrate-binding protein compare
PS417_08540 -1.3 -2.4 RNA helicase compare
PS417_05975 -1.3 -0.9 chemotaxis protein CheW compare
PS417_01575 -1.3 -4.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_19785 -1.3 -2.2 flagellar biogenesis protein compare
PS417_21555 -1.2 -7.6 flagellar hook protein FlgE compare
PS417_19805 -1.2 -3.1 flagellar M-ring protein FliF compare
PS417_20705 -1.2 -3.3 cbb3-type cytochrome c oxidase subunit II compare
PS417_16510 -1.2 -3.4 Clp protease ClpX compare
PS417_09235 -1.2 -1.1 molecular chaperone compare
PS417_25715 -1.2 -5.1 anthranilate phosphoribosyltransferase compare
PS417_19710 -1.2 -7.6 flagellar biosynthesis protein FlhA compare
PS417_19955 -1.2 -2.0 hypothetical protein compare
PS417_08730 -1.2 -1.6 cytochrome C compare
PS417_06205 -1.2 -5.1 methionine aminopeptidase compare
PS417_19825 -1.2 -8.2 ATPase AAA compare
PS417_14940 -1.2 -1.7 LysR family transcriptional regulator compare
PS417_20715 -1.2 -2.5 cytochrome Cbb3 compare
PS417_24705 -1.2 -1.8 D-alanyl-D-alanine carboxypeptidase compare
PS417_13180 -1.2 -5.2 AraC family transcriptional regulator compare
PS417_17840 -1.1 -1.8 betaine-aldehyde dehydrogenase compare
PS417_21630 -1.1 -2.3 magnesium transporter compare
PS417_01565 -1.1 -3.4 imidazole glycerol phosphate synthase compare
PS417_19745 -1.1 -7.2 flagellar assembly protein FliO compare
PS417_24500 -1.1 -2.7 DEAD/DEAH box helicase compare
PS417_02575 -1.1 -3.2 membrane protein compare
PS417_23110 -1.1 -5.5 2-isopropylmalate synthase compare
PS417_20025 -1.1 -1.7 alpha-ribazole phosphatase compare
PS417_19725 -1.1 -3.4 flagellar biosynthesis protein FlhB compare
PS417_03380 -1.1 -0.8 hypothetical protein compare
PS417_21915 -1.1 -1.5 LysR family transcriptional regulator compare
PS417_21655 -1.1 -1.1 aspartate kinase compare
PS417_28020 -1.0 -2.2 chorismate--pyruvate lyase compare
PS417_26985 -1.0 -3.1 phosphoenolpyruvate-protein phosphotransferase compare
PS417_23025 -1.0 -4.0 murein transglycosylase compare
PS417_18530 -1.0 -4.3 O-succinylhomoserine sulfhydrylase compare
PS417_21560 -1.0 -2.8 flagellar basal body rod modification protein FlgD compare
PS417_26890 -1.0 -3.7 dihydroxy-acid dehydratase compare
PS417_28080 -1.0 -6.8 phosphate ABC transporter permease compare
PS417_04390 -1.0 -1.6 toluene tolerance protein compare
PS417_19335 -1.0 -2.1 isochorismatase compare
PS417_19755 -1.0 -1.9 flagellar motor switch protein FliM compare
PS417_23950 -1.0 -1.5 polynucleotide phosphorylase/polyadenylase compare
PS417_19695 -1.0 -5.3 flagellar biosynthesis sigma factor compare
PS417_10810 -1.0 -1.1 hypothetical protein compare
PS417_21625 -1.0 -1.0 DNA-binding protein compare
PS417_19665 -1.0 -3.0 flagellar motor protein MotD compare
PS417_04410 -1.0 -1.3 hypothetical protein compare
PS417_01605 -1.0 -0.9 phosphoglycerate mutase compare
PS417_09440 -1.0 -2.0 MerR family transcriptional regulator compare
PS417_16555 -1.0 -1.4 cupin compare
PS417_07640 -1.0 -2.0 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_15090 -1.0 -1.4 hypothetical protein compare
PS417_24630 -1.0 -2.1 ATP-binding protein compare
PS417_00375 -1.0 -2.9 membrane protein compare
PS417_08155 -1.0 -0.8 integration host factor subunit beta compare
PS417_02475 -1.0 -2.4 N-acetylmuramoyl-L-alanine amidase compare
PS417_13255 -1.0 -2.0 ABC transporter compare
PS417_16005 -0.9 -2.0 ATPase compare
PS417_25315 -0.9 -3.5 membrane protein compare
PS417_19870 -0.9 -2.8 flagellar rod assembly protein FlgJ compare
PS417_21680 -0.9 -2.4 succinylglutamate desuccinylase compare
PS417_15085 -0.9 -2.3 ATPase AAA compare
PS417_16465 -0.9 -5.2 sirohydrochlorin ferrochelatase compare
PS417_02880 -0.9 -1.6 copper chaperone compare
PS417_01640 -0.9 -2.4 histidine kinase compare
PS417_19730 -0.9 -2.0 flagellar biosynthesis protein FliR compare
PS417_06395 -0.9 -2.2 amino acid transporter compare
PS417_07945 -0.9 -2.2 hypothetical protein compare
PS417_12805 -0.9 -5.7 glycogen branching protein compare
PS417_07565 -0.9 -1.7 hypothetical protein compare
PS417_01560 -0.9 -1.5 imidazoleglycerol-phosphate dehydratase compare
PS417_21035 -0.9 -6.1 multidrug transporter compare
PS417_16720 -0.9 -1.1 membrane protein compare
PS417_17035 -0.9 -1.2 Cro/Cl family transcriptional regulator compare
PS417_02805 -0.9 -1.1 urease subunit gamma compare
PS417_15110 -0.9 -3.9 protein BatD compare
PS417_18025 -0.9 -2.1 cytochrome C compare
PS417_00065 -0.9 -1.4 3-methyladenine DNA glycosylase compare
PS417_02270 -0.9 -2.7 carbamoyltransferase compare
PS417_26745 -0.9 -2.5 methionine biosynthesis protein MetW compare
PS417_20785 -0.9 -1.9 transcriptional regulator compare
PS417_26990 -0.9 -0.7 RNA pyrophosphohydrolase compare
PS417_15105 -0.9 -3.8 membrane protein compare
PS417_15885 -0.9 -1.5 GCN5 family acetyltransferase compare
PS417_17550 -0.9 -2.9 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) compare
PS417_16195 -0.9 -0.9 AraC family transcriptional regulator compare
PS417_26660 -0.9 -2.5 protein PilI compare
PS417_12310 -0.8 -3.9 methionine synthase compare
PS417_00085 -0.8 -1.5 16S rRNA methyltransferase compare
PS417_03560 -0.8 -1.0 GTP-binding protein compare
PS417_20700 -0.8 -5.0 cbb3-type cytochrome c oxidase subunit I compare
PS417_06355 -0.8 -1.8 protein-L-isoaspartate O-methyltransferase compare
PS417_28220 -0.8 -2.0 LysR family transcriptional regulator compare
PS417_11475 -0.8 -1.5 membrane protein compare
PS417_19790 -0.8 -2.1 ATP synthase compare
PS417_15770 -0.8 -1.1 pyridoxine 5'-phosphate oxidase compare
PS417_15675 -0.8 -3.3 chemotaxis protein compare
PS417_26645 -0.8 -1.1 chemotaxis protein compare
PS417_08740 -0.8 -0.9 ribose-phosphate pyrophosphokinase compare
PS417_11930 -0.8 -4.3 hypothetical protein compare
PS417_13855 -0.8 -0.9 acetyl-CoA acetyltransferase compare
PS417_08580 -0.8 -3.8 histidine kinase compare
PS417_10015 -0.8 -0.8 hypothetical protein compare
PS417_08130 -0.8 -1.4 aspartate aminotransferase compare
PS417_17545 -0.8 -2.9 2-oxoisovalerate dehydrogenase compare
PS417_22855 -0.8 -2.0 ssDNA exonuclease RecJ compare
PS417_21210 -0.8 -2.0 amidotransferase compare
PS417_02485 -0.8 -2.8 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_03525 -0.8 -1.3 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment