Experiment set19IT036 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_19730 -9.2 -3.3 flagellar biosynthesis protein FliR compare
PS417_21585 -8.4 -9.0 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_18595 -8.3 -3.4 3-isopropylmalate dehydratase compare
PS417_19660 -8.2 -6.7 cobalamin biosynthesis protein CobQ compare
PS417_25720 -8.2 -6.5 anthranilate synthase component II compare
PS417_18600 -8.1 -2.9 isopropylmalate isomerase compare
PS417_18540 -8.1 -3.8 colicin V production CvpA compare
PS417_19785 -8.1 -3.1 flagellar biogenesis protein compare
PS417_19765 -8.0 -8.2 flagellar hook-length control protein compare
PS417_21570 -7.9 -3.6 flagellar basal body rod protein FlgB compare
PS417_05635 -7.7 -7.2 membrane protein compare
PS417_05595 -7.7 -5.3 ornithine carbamoyltransferase compare
PS417_26740 -7.6 -7.2 homoserine acetyltransferase compare
PS417_21595 -7.5 -4.2 flagellar biosynthesis protein FlgN compare
PS417_23805 -7.5 -4.0 acetolactate synthase 3 regulatory subunit compare
PS417_19850 -7.3 -7.1 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_19755 -7.2 -1.5 flagellar motor switch protein FliM compare
PS417_19740 -7.1 -6.3 flagellar biosynthesis protein flip compare
PS417_19860 -7.0 -18.7 flagellar hook protein FlgL compare
PS417_23800 -6.8 -6.6 ketol-acid reductoisomerase compare
PS417_19650 -6.8 -3.6 chemotaxis protein CheW compare
PS417_19795 -6.7 -6.6 flagellar assembly protein FliH compare
PS417_19705 -6.7 -2.7 flagellar biosynthesis regulator FlhF compare
PS417_19880 -6.6 -6.7 flagellar basal body L-ring protein compare
PS417_19695 -6.6 -9.4 flagellar biosynthesis sigma factor compare
PS417_23950 -6.6 -2.3 polynucleotide phosphorylase/polyadenylase compare
PS417_19675 -6.6 -4.0 chemotaxis protein CheY compare
PS417_19800 -6.5 -1.9 flagellar motor switch protein FliG compare
PS417_19745 -6.5 -5.2 flagellar assembly protein FliO compare
PS417_19710 -6.3 -11.1 flagellar biosynthesis protein FlhA compare
PS417_02210 -6.3 -6.0 diguanylate cyclase compare
PS417_21575 -6.3 -5.7 chemotaxis protein compare
PS417_19840 -6.3 -11.7 flagellar cap protein FliD compare
PS417_19725 -6.3 -3.4 flagellar biosynthesis protein FlhB compare
PS417_18585 -6.2 -5.1 3-isopropylmalate dehydrogenase compare
PS417_02280 -6.2 -2.2 GlcNAc-PI de-N-acetylase compare
PS417_19885 -6.1 -1.7 flagellar basal body rod protein FlgG compare
PS417_23810 -6.1 -11.7 acetolactate synthase 3 catalytic subunit compare
PS417_01760 -5.9 -3.2 imidazolonepropionase compare
PS417_19665 -5.9 -3.7 flagellar motor protein MotD compare
PS417_19735 -5.9 -4.0 flagellar biosynthesis protein FliQ compare
PS417_19825 -5.7 -8.4 ATPase AAA compare
PS417_02005 -5.7 -11.1 glutamate synthase compare
PS417_21125 -5.7 -5.5 phosphoadenosine phosphosulfate reductase compare
PS417_23545 -5.7 -2.3 gamma-glutamyl kinase compare
PS417_25725 -5.7 -9.8 anthranilate synthase component I compare
PS417_02000 -5.6 -11.5 glutamate synthase compare
PS417_27835 -5.6 -5.7 endoribonuclease compare
PS417_26890 -5.5 -6.7 dihydroxy-acid dehydratase compare
PS417_08230 -5.4 -2.0 lipopolysaccharide biosynthesis protein RfbH compare
PS417_01750 -5.4 -3.1 histidine ammonia-lyase compare
PS417_06245 -5.4 -2.3 zinc metallopeptidase RseP compare
PS417_28220 -5.4 -2.4 LysR family transcriptional regulator compare
PS417_18560 -5.4 -5.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_20105 -5.3 -20.7 glycosyl transferase compare
PS417_25715 -5.2 -4.9 anthranilate phosphoribosyltransferase compare
PS417_19790 -5.2 -3.7 ATP synthase compare
PS417_27040 -5.2 -2.6 3-phosphoglycerate dehydrogenase compare
PS417_12290 -5.0 -7.4 sulfite reductase compare
PS417_19865 -5.0 -8.6 flagellar hook protein FlgK compare
PS417_02415 -5.0 -4.7 phosphoserine phosphatase compare
PS417_19620 -5.0 -2.3 hypothetical protein compare
PS417_23110 -4.9 -7.2 2-isopropylmalate synthase compare
PS417_22565 -4.8 -1.0 formyltetrahydrofolate deformylase compare
PS417_21565 -4.7 -3.5 flagellar basal body rod protein FlgC compare
PS417_01955 -4.7 -10.1 peptidase compare
PS417_24745 -4.6 -2.0 gamma-glutamyl phosphate reductase compare
PS417_05975 -4.6 -1.0 chemotaxis protein CheW compare
PS417_19835 -4.6 -1.4 flagellar biosynthesis protein FliS compare
PS417_00185 -4.6 -4.1 tryptophan synthase subunit beta compare
PS417_18310 -4.6 -1.6 hypothetical protein compare
PS417_04585 -4.5 -1.6 hypothetical protein compare
PS417_19645 -4.5 -2.8 chemotaxis protein compare
PS417_27300 -4.4 -0.9 cell division protein ZapA compare
PS417_08220 -4.4 -0.9 epimerase compare
PS417_27795 -4.4 -0.9 orotate phosphoribosyltransferase compare
PS417_19870 -4.3 -4.7 flagellar rod assembly protein FlgJ compare
PS417_05365 -4.3 -1.8 FAD-binding protein compare
PS417_20610 -4.3 -1.2 hypothetical protein compare
PS417_19690 -4.2 -2.8 histidine kinase compare
PS417_25710 -4.2 -1.2 indole-3-glycerol-phosphate synthase compare
PS417_16490 -4.2 -1.2 cell division protein FtsK compare
PS417_23580 -4.1 -1.2 peptidylprolyl isomerase compare
PS417_26510 -4.1 -8.3 5,10-methylenetetrahydrofolate reductase compare
PS417_08545 -4.1 -1.7 aromatic ring-opening dioxygenase LigB compare
PS417_21555 -4.1 -5.5 flagellar hook protein FlgE compare
PS417_01635 -4.0 -6.5 nitrogen regulation protein NR(I) compare
PS417_06375 -4.0 -0.8 deoxycytidine triphosphate deaminase compare
PS417_08170 -4.0 -11.7 capsular biosynthesis protein compare
PS417_01915 -4.0 -0.8 ATP-dependent protease ATP-binding subunit HslU compare
PS417_18690 -3.9 -2.8 aromatic amino acid aminotransferase compare
PS417_08225 -3.9 -3.4 acetolactate synthase compare
PS417_19625 -3.9 -2.5 histidine kinase compare
PS417_19805 -3.8 -3.7 flagellar M-ring protein FliF compare
PS417_12310 -3.8 -7.0 methionine synthase compare
PS417_00180 -3.8 -1.7 tryptophan synthase subunit alpha compare
PS417_18530 -3.8 -3.0 O-succinylhomoserine sulfhydrylase compare
PS417_16465 -3.8 -6.4 sirohydrochlorin ferrochelatase compare
PS417_15105 -3.7 -8.1 membrane protein compare
PS417_20985 -3.7 -1.9 porin compare
PS417_27195 -3.7 -1.1 N-acetylglutamate synthase compare
PS417_21480 -3.7 -1.3 23S rRNA pseudouridylate synthase compare
PS417_21390 -3.6 -2.7 hypothetical protein compare
PS417_08195 -3.6 -8.4 hypothetical protein compare
PS417_12855 -3.6 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_04380 -3.6 -1.3 ABC transporter permease compare
PS417_23025 -3.6 -7.6 murein transglycosylase compare
PS417_20855 -3.6 -1.0 hypothetical protein compare
PS417_01705 -3.5 -6.9 Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data) compare
PS417_08205 -3.4 -3.7 acetyltransferase compare
PS417_00370 -3.4 -1.0 hypothetical protein compare
PS417_22450 -3.4 -1.2 ATP-dependent DNA helicase RuvA compare
PS417_26745 -3.4 -3.0 methionine biosynthesis protein MetW compare
PS417_03260 -3.4 -0.9 5S ribosomal RNA compare
PS417_20650 -3.4 -8.4 hypothetical protein compare
PS417_13075 -3.4 -1.7 hypothetical protein compare
PS417_06895 -3.4 -3.2 DNA-binding protein compare
PS417_20160 -3.3 -2.3 cysteine synthase compare
PS417_08135 -3.3 -5.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_01605 -3.3 -1.4 phosphoglycerate mutase compare
PS417_16370 -3.2 -8.0 chemotaxis protein CheY compare
PS417_01510 -3.2 -2.3 hypothetical protein compare
PS417_05815 -3.2 -5.0 recombinase RecA compare
PS417_08245 -3.1 -0.9 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_17215 -3.1 -2.4 peptidylprolyl isomerase compare
PS417_21430 -3.1 -2.2 3-oxoacyl-ACP synthase compare
PS417_20585 -3.1 -6.4 chemotaxis protein compare
PS417_26695 -3.0 -0.8 uracil phosphoribosyltransferase compare
PS417_15325 -3.0 -1.1 type VI secretion protein compare
PS417_24835 -3.0 -4.0 hypothetical protein compare
PS417_26985 -3.0 -5.0 phosphoenolpyruvate-protein phosphotransferase compare
PS417_20025 -3.0 -1.5 alpha-ribazole phosphatase compare
PS417_22620 -3.0 -4.7 pyruvate kinase compare
PS417_27305 -2.9 -5.3 5-formyltetrahydrofolate cyclo-ligase compare
PS417_24710 -2.9 -5.0 lipoprotein compare
PS417_22840 -2.9 -1.5 tRNA-Met compare
PS417_19830 -2.9 -1.3 flagellar assembly protein FliT compare
PS417_08685 -2.9 -1.0 flagellar hook-length control protein FliK compare
PS417_18545 -2.9 -1.8 cell division protein compare
PS417_22445 -2.8 -2.5 ATP-dependent DNA helicase RuvB compare
PS417_08190 -2.8 -9.3 membrane protein compare
PS417_08090 -2.8 -0.8 3-oxoacyl-ACP reductase compare
PS417_08200 -2.8 -2.3 hypothetical protein compare
PS417_04375 -2.8 -2.2 ABC transporter ATP-binding protein compare
PS417_16990 -2.8 -4.0 acyl-CoA dehydrogenase compare
PS417_21320 -2.8 -3.7 transcriptional regulator compare
PS417_27870 -2.7 -2.8 ATP-dependent DNA helicase RecG compare
PS417_01990 -2.7 -4.6 cell division protein compare
PS417_09235 -2.7 -1.0 molecular chaperone compare
PS417_04475 -2.7 -2.8 hypothetical protein compare
PS417_05985 -2.6 -2.2 chemotaxis protein CheY compare
PS417_26730 -2.6 -0.8 pyrroline-5-carboxylate reductase compare
PS417_23855 -2.6 -1.5 ABC transporter substrate-binding protein compare
PS417_08130 -2.6 -2.3 aspartate aminotransferase compare
PS417_15095 -2.6 -2.8 hypothetical protein compare
PS417_07565 -2.6 -2.6 hypothetical protein compare
PS417_08580 -2.6 -6.3 histidine kinase compare
PS417_27800 -2.5 -2.5 exodeoxyribonuclease III compare
PS417_01720 -2.5 -8.3 Urocanate hydratase (EC 4.2.1.49) (from data) compare
PS417_00045 -2.5 -1.6 glycerol acyltransferase compare
PS417_08540 -2.5 -1.9 RNA helicase compare
PS417_21560 -2.5 -2.7 flagellar basal body rod modification protein FlgD compare
PS417_03560 -2.5 -1.6 GTP-binding protein compare
PS417_02270 -2.5 -3.9 carbamoyltransferase compare
PS417_15085 -2.5 -5.0 ATPase AAA compare
PS417_04180 -2.5 -3.5 GntR family transcriptional regulator compare
PS417_26040 -2.4 -4.1 malate synthase compare
PS417_19655 -2.4 -1.5 chemotaxis protein CheW compare
PS417_08185 -2.4 -3.9 glycosyl transferase compare
PS417_27865 -2.4 -1.8 LysR family transcriptional regulator compare
PS417_19820 -2.4 -2.5 histidine kinase compare
PS417_15110 -2.4 -4.2 protein BatD compare
PS417_20775 -2.4 -5.0 coproporphyrinogen III oxidase compare
PS417_27435 -2.3 -5.0 polyphosphate kinase compare
PS417_02440 -2.3 -2.1 flagellar motor protein MotB compare
PS417_20635 -2.3 -0.8 ABC transporter ATP-binding protein compare
PS417_20095 -2.3 -5.6 hypothetical protein compare
PS417_05010 -2.2 -1.9 IclR family transcriptional regulator compare
PS417_02805 -2.2 -1.5 urease subunit gamma compare
PS417_05575 -2.2 -6.9 Glycerol kinase (EC 2.7.1.30) (from data) compare
PS417_10675 -2.2 -0.9 TetR family transcriptional regulator compare
PS417_19630 -2.2 -1.9 LuxR family transcriptional regulator compare
PS417_02980 -2.2 -1.1 chemotaxis protein compare
PS417_21655 -2.1 -0.9 aspartate kinase compare
PS417_03930 -2.1 -5.3 thymidine phosphorylase compare
PS417_25645 -2.1 -4.4 peptidase M23 compare
PS417_01640 -2.1 -4.5 histidine kinase compare
PS417_15470 -2.1 -3.9 saccharopine dehydrogenase compare
PS417_22690 -2.1 -2.5 phosphogluconate dehydratase compare
PS417_21915 -2.1 -2.3 LysR family transcriptional regulator compare
PS417_24370 -2.1 -0.7 (2Fe-2S)-binding protein compare
PS417_24275 -2.0 -10.8 diguanylate phosphodiesterase compare
PS417_23775 -2.0 -1.3 exodeoxyribonuclease V subunit beta compare
PS417_23900 -2.0 -7.6 poly(A) polymerase compare
PS417_19600 -2.0 -0.8 exonuclease compare
PS417_17565 -2.0 -2.1 branched-chain amino acid aminotransferase compare
PS417_06200 -2.0 -3.9 protein-PII uridylyltransferase compare
PS417_02385 -1.9 -1.0 esterase compare
PS417_07560 -1.9 -1.5 universal stress protein UspA compare
PS417_06645 -1.9 -7.3 RNA polymerase-associated protein RapA compare


Specific Phenotypes

For 3 genes in this experiment