Experiment set19IT035 for Pseudomonas simiae WCS417

Compare to:

Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_18600 -4.9 -3.4 isopropylmalate isomerase compare
PS417_19425 -4.9 -1.3 allantoicase compare
PS417_23545 -4.8 -3.5 gamma-glutamyl kinase compare
PS417_22565 -4.7 -1.2 formyltetrahydrofolate deformylase compare
PS417_27135 -4.5 -1.2 glutamine synthetase compare
PS417_27795 -4.3 -1.1 orotate phosphoribosyltransferase compare
PS417_25710 -4.3 -1.6 indole-3-glycerol-phosphate synthase compare
PS417_23805 -4.2 -3.8 acetolactate synthase 3 regulatory subunit compare
PS417_00185 -4.1 -4.6 tryptophan synthase subunit beta compare
PS417_18560 -4.0 -9.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_20985 -3.9 -2.4 porin compare
PS417_24745 -3.8 -4.3 gamma-glutamyl phosphate reductase compare
PS417_27195 -3.6 -1.3 N-acetylglutamate synthase compare
PS417_20855 -3.6 -1.3 hypothetical protein compare
PS417_21575 -3.5 -8.3 chemotaxis protein compare
PS417_18585 -3.5 -4.8 3-isopropylmalate dehydrogenase compare
PS417_01605 -3.4 -1.7 phosphoglycerate mutase compare
PS417_28220 -3.3 -2.2 LysR family transcriptional regulator compare
PS417_07875 -3.3 -1.2 hypothetical protein compare
PS417_26740 -3.3 -8.5 homoserine acetyltransferase compare
PS417_23810 -3.2 -9.5 acetolactate synthase 3 catalytic subunit compare
PS417_19690 -3.2 -5.6 histidine kinase compare
PS417_02415 -3.2 -4.6 phosphoserine phosphatase compare
PS417_19880 -3.1 -9.9 flagellar basal body L-ring protein compare
PS417_23800 -3.0 -9.8 ketol-acid reductoisomerase compare
PS417_19885 -3.0 -3.9 flagellar basal body rod protein FlgG compare
PS417_00180 -2.9 -2.5 tryptophan synthase subunit alpha compare
PS417_02005 -2.9 -8.6 glutamate synthase compare
PS417_19785 -2.8 -4.8 flagellar biogenesis protein compare
PS417_25720 -2.8 -4.5 anthranilate synthase component II compare
PS417_02000 -2.8 -11.1 glutamate synthase compare
PS417_04375 -2.8 -2.7 ABC transporter ATP-binding protein compare
PS417_08090 -2.8 -1.0 3-oxoacyl-ACP reductase compare
PS417_21570 -2.8 -4.3 flagellar basal body rod protein FlgB compare
PS417_19860 -2.7 -14.1 flagellar hook protein FlgL compare
PS417_15085 -2.7 -5.5 ATPase AAA compare
PS417_19840 -2.7 -11.7 flagellar cap protein FliD compare
PS417_23770 -2.7 -1.5 exodeoxyribonuclease V subunit alpha compare
PS417_19730 -2.7 -3.0 flagellar biosynthesis protein FliR compare
PS417_21585 -2.7 -9.4 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_08125 -2.7 -0.7 prephenate dehydratase compare
PS417_19865 -2.7 -12.3 flagellar hook protein FlgK compare
PS417_19695 -2.7 -9.8 flagellar biosynthesis sigma factor compare
PS417_06680 -2.6 -8.6 nuclease PIN compare
PS417_26730 -2.6 -1.0 pyrroline-5-carboxylate reductase compare
PS417_12855 -2.6 -3.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_05635 -2.6 -5.9 membrane protein compare
PS417_08220 -2.6 -0.9 epimerase compare
PS417_19795 -2.5 -11.6 flagellar assembly protein FliH compare
PS417_21595 -2.5 -3.7 flagellar biosynthesis protein FlgN compare
PS417_27005 -2.5 -1.1 membrane protein compare
PS417_19705 -2.5 -3.2 flagellar biosynthesis regulator FlhF compare
PS417_07170 -2.5 -4.2 hypothetical protein compare
PS417_01635 -2.5 -3.7 nitrogen regulation protein NR(I) compare
PS417_23775 -2.4 -1.4 exodeoxyribonuclease V subunit beta compare
PS417_19850 -2.4 -8.9 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_27800 -2.4 -2.8 exodeoxyribonuclease III compare
PS417_05595 -2.4 -7.7 ornithine carbamoyltransferase compare
PS417_18595 -2.4 -3.0 3-isopropylmalate dehydratase compare
PS417_20160 -2.4 -5.6 cysteine synthase compare
PS417_19710 -2.3 -11.7 flagellar biosynthesis protein FlhA compare
PS417_02485 -2.3 -3.8 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_19745 -2.3 -5.5 flagellar assembly protein FliO compare
PS417_27835 -2.3 -5.3 endoribonuclease compare
PS417_21555 -2.3 -7.1 flagellar hook protein FlgE compare
PS417_06200 -2.2 -5.4 protein-PII uridylyltransferase compare
PS417_09150 -2.2 -2.6 energy transducer TonB compare
PS417_01750 -2.2 -2.9 histidine ammonia-lyase compare
PS417_19765 -2.2 -8.0 flagellar hook-length control protein compare
PS417_19735 -2.2 -5.2 flagellar biosynthesis protein FliQ compare
PS417_07710 -2.2 -6.4 membrane protein compare
PS417_19790 -2.2 -3.5 ATP synthase compare
PS417_19650 -2.2 -4.1 chemotaxis protein CheW compare
PS417_12290 -2.2 -4.0 sulfite reductase compare
PS417_26890 -2.1 -5.1 dihydroxy-acid dehydratase compare
PS417_26745 -2.1 -6.3 methionine biosynthesis protein MetW compare
PS417_21510 -2.1 -1.7 histidine kinase compare
PS417_04585 -2.1 -1.5 hypothetical protein compare
PS417_03260 -2.1 -1.3 5S ribosomal RNA compare
PS417_21125 -2.1 -5.1 phosphoadenosine phosphosulfate reductase compare
PS417_25715 -2.1 -3.9 anthranilate phosphoribosyltransferase compare
PS417_19825 -2.1 -9.1 ATPase AAA compare
PS417_01705 -2.1 -7.5 Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data) compare
PS417_25725 -2.1 -7.4 anthranilate synthase component I compare
PS417_23110 -2.0 -5.9 2-isopropylmalate synthase compare
PS417_22990 -2.0 -1.6 iron dicitrate transport regulator FecR compare
PS417_21480 -2.0 -1.5 23S rRNA pseudouridylate synthase compare
PS417_23025 -2.0 -4.6 murein transglycosylase compare
PS417_13165 -1.9 -2.6 peroxidase compare
PS417_19955 -1.9 -1.8 hypothetical protein compare
PS417_06245 -1.9 -1.6 zinc metallopeptidase RseP compare
PS417_22620 -1.9 -4.4 pyruvate kinase compare
PS417_16465 -1.9 -5.6 sirohydrochlorin ferrochelatase compare
PS417_19805 -1.9 -2.8 flagellar M-ring protein FliF compare
PS417_12310 -1.8 -5.0 methionine synthase compare
PS417_08200 -1.8 -2.7 hypothetical protein compare
PS417_05445 -1.8 -1.2 DNA mismatch repair protein MutT compare
PS417_27865 -1.8 -2.9 LysR family transcriptional regulator compare
PS417_01920 -1.8 -0.9 ATP-dependent protease subunit HslV compare
PS417_18530 -1.8 -4.0 O-succinylhomoserine sulfhydrylase compare
PS417_02280 -1.8 -1.0 GlcNAc-PI de-N-acetylase compare
PS417_21565 -1.7 -3.3 flagellar basal body rod protein FlgC compare
PS417_06845 -1.7 -1.5 lipoprotein compare
PS417_02975 -1.7 -2.0 3-dehydroquinate dehydratase compare
PS417_21655 -1.7 -1.1 aspartate kinase compare
PS417_22445 -1.7 -3.2 ATP-dependent DNA helicase RuvB compare
PS417_04380 -1.7 -0.9 ABC transporter permease compare
PS417_19755 -1.7 -1.9 flagellar motor switch protein FliM compare
PS417_19675 -1.7 -4.1 chemotaxis protein CheY compare
PS417_03560 -1.7 -1.3 GTP-binding protein compare
PS417_24460 -1.7 -1.5 hypothetical protein compare
PS417_05575 -1.7 -7.2 Glycerol kinase (EC 2.7.1.30) (from data) compare
PS417_19725 -1.6 -3.7 flagellar biosynthesis protein FlhB compare
PS417_21390 -1.6 -4.7 hypothetical protein compare
PS417_27585 -1.6 -1.7 diaminopimelate epimerase compare
PS417_19740 -1.6 -3.7 flagellar biosynthesis protein flip compare
PS417_19660 -1.6 -5.5 cobalamin biosynthesis protein CobQ compare
PS417_12280 -1.6 -1.7 MerR family transcriptional regulator compare
PS417_26370 -1.6 -4.0 RNA helicase compare
PS417_21705 -1.6 -2.9 arginine N-succinyltransferase compare
PS417_11965 -1.5 -1.8 GCN5 family acetyltransferase compare
PS417_16490 -1.5 -1.2 cell division protein FtsK compare
PS417_19655 -1.5 -3.0 chemotaxis protein CheW compare
PS417_27010 -1.5 -5.0 threonine dehydratase compare
PS417_28070 -1.5 -5.7 phosphate ABC transporter ATP-binding protein compare
PS417_00370 -1.5 -1.0 hypothetical protein compare
PS417_13510 -1.5 -0.9 polyketide cyclase compare
PS417_24705 -1.5 -1.3 D-alanyl-D-alanine carboxypeptidase compare
PS417_24585 -1.5 -6.5 AMP nucleosidase compare
PS417_19835 -1.5 -1.5 flagellar biosynthesis protein FliS compare
PS417_01640 -1.5 -3.2 histidine kinase compare
PS417_26695 -1.5 -1.1 uracil phosphoribosyltransferase compare
PS417_01955 -1.5 -4.6 peptidase compare
PS417_18885 -1.5 -2.2 GntR family transcriptional regulator compare
PS417_06710 -1.5 -1.4 beta-ketoadipyl CoA thiolase compare
PS417_22210 -1.4 -1.7 AraC family transcriptional regulator compare
PS417_21560 -1.4 -2.9 flagellar basal body rod modification protein FlgD compare
PS417_07640 -1.4 -1.5 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_21430 -1.4 -1.8 3-oxoacyl-ACP synthase compare
PS417_24675 -1.4 -1.5 lipoyl synthase compare
PS417_10400 -1.4 -2.6 membrane protein compare
PS417_27290 -1.4 -1.5 hypothetical protein compare
PS417_26985 -1.4 -2.9 phosphoenolpyruvate-protein phosphotransferase compare
PS417_24935 -1.4 -0.9 hypothetical protein compare
PS417_11585 -1.4 -1.6 LuxR family transcriptional regulator compare
PS417_21035 -1.4 -6.3 multidrug transporter compare
PS417_14755 -1.3 -1.1 UV damage repair endonuclease UvdE compare
PS417_08685 -1.3 -1.5 flagellar hook-length control protein FliK compare
PS417_08575 -1.3 -2.0 MarR family transcriptional regulator compare
PS417_01400 -1.3 -2.1 hypothetical protein compare
PS417_01095 -1.3 -0.8 amino acid ABC transporter ATP-binding protein compare
PS417_06540 -1.3 -1.1 membrane protein compare
PS417_01590 -1.3 -1.6 polysaccharide deacetylase compare
PS417_05010 -1.3 -1.7 IclR family transcriptional regulator compare
PS417_21630 -1.3 -1.6 magnesium transporter compare
PS417_02560 -1.2 -1.2 23S rRNA methyltransferase compare
PS417_27990 -1.2 -1.5 hypothetical protein compare
PS417_22300 -1.2 -1.1 LTXXQ domain protein compare
PS417_08540 -1.2 -1.7 RNA helicase compare
PS417_02980 -1.2 -1.1 chemotaxis protein compare
PS417_28515 -1.2 -1.7 16S rRNA methyltransferase compare
PS417_05820 -1.2 -1.9 recombinase RecX compare
PS417_21830 -1.2 -2.5 TetR family transcriptional regulator compare
PS417_09865 -1.2 -0.7 hypothetical protein compare
PS417_10955 -1.2 -2.2 porin compare
PS417_02555 -1.2 -6.2 exoribonuclease R compare
PS417_26510 -1.2 -4.6 5,10-methylenetetrahydrofolate reductase compare
PS417_19800 -1.2 -2.4 flagellar motor switch protein FliG compare
PS417_04595 -1.1 -1.6 cell division protein MraZ compare
PS417_27245 -1.1 -2.8 aminotransferase DegT compare
PS417_05580 -1.1 -4.3 glycerol uptake facilitator GlpF compare
PS417_15495 -1.1 -1.4 FAD-dependent oxidoreductase compare
PS417_10840 -1.1 -2.1 amidase compare
PS417_27870 -1.1 -1.9 ATP-dependent DNA helicase RecG compare
PS417_01875 -1.1 -1.5 polyhydroxyalkanoic acid system protein compare
PS417_15400 -1.1 -1.2 hypothetical protein compare
PS417_19830 -1.1 -2.2 flagellar assembly protein FliT compare
PS417_13870 -1.1 -2.8 hypothetical protein compare
PS417_25780 -1.1 -1.3 molecular chaperone DnaJ compare
PS417_26260 -1.1 -1.1 hypothetical protein compare
PS417_06095 -1.1 -1.2 energy transducer TonB compare
PS417_02890 -1.1 -1.8 cobalt-precorrin-6X reductase compare
PS417_01720 -1.0 -4.2 Urocanate hydratase (EC 4.2.1.49) (from data) compare
PS417_16055 -1.0 -1.5 biopolymer transporter TolR compare
PS417_19665 -1.0 -1.9 flagellar motor protein MotD compare
PS417_02765 -1.0 -1.1 phosphate starvation-inducible protein PsiF compare
PS417_05165 -1.0 -1.3 cytosol aminopeptidase compare
PS417_18590 -1.0 -2.0 SAM-dependent methyltransferase compare
PS417_19415 -1.0 -2.0 allantoinase compare
PS417_26805 -1.0 -0.7 cell division protein FtsE compare
PS417_19870 -1.0 -2.1 flagellar rod assembly protein FlgJ compare
PS417_00275 -1.0 -2.2 hypothetical protein compare
PS417_12915 -1.0 -1.7 DNA-binding protein compare
PS417_12870 -1.0 -1.2 enoyl-CoA hydratase compare
PS417_12520 -1.0 -1.3 hypothetical protein compare
PS417_27425 -1.0 -4.0 exopolyphosphatase compare
PS417_28080 -1.0 -5.5 phosphate ABC transporter permease compare
PS417_27705 -1.0 -1.0 amino acid dehydrogenase compare
PS417_05100 -1.0 -1.0 RNA polymerase sigma factor compare
PS417_05535 -1.0 -1.1 Fis family transcriptional regulator compare


Specific Phenotypes

For 2 genes in this experiment