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Experiment set19IT033 for
Pseudomonas simiae WCS417
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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
200 most important genes:
gene
name
fitness
t score
description
PS417
_21430
-4.9
-3.2
3-oxoacyl-ACP synthase
compare
PS417
_27040
-4.6
-4.0
3-phosphoglycerate dehydrogenase
compare
PS417
_27865
-4.4
-3.7
LysR family transcriptional regulator
compare
PS417
_25710
-4.2
-1.8
indole-3-glycerol-phosphate synthase
compare
PS417
_27870
-4.1
-4.8
ATP-dependent DNA helicase RecG
compare
PS417
_24745
-4.0
-4.5
gamma-glutamyl phosphate reductase
compare
PS417
_21630
-3.6
-3.5
magnesium transporter
compare
PS417
_05815
-3.5
-6.3
recombinase RecA
compare
PS417
_12855
-3.4
-5.9
3-phosphoshikimate 1-carboxyvinyltransferase
compare
PS417
_00185
-3.2
-4.0
tryptophan synthase subunit beta
compare
PS417
_23810
-3.2
-9.5
acetolactate synthase 3 catalytic subunit
compare
PS417
_19850
-3.1
-9.6
branched-chain alpha-keto acid dehydrogenase subunit E2
compare
PS417
_19725
-2.9
-8.7
flagellar biosynthesis protein FlhB
compare
PS417
_06680
-2.9
-8.2
nuclease PIN
compare
PS417
_22565
-2.8
-1.2
formyltetrahydrofolate deformylase
compare
PS417
_19650
-2.8
-4.8
chemotaxis protein CheW
compare
PS417
_02005
-2.8
-10.9
glutamate synthase
compare
PS417
_18310
-2.8
-1.6
hypothetical protein
compare
PS417
_21575
-2.7
-8.7
chemotaxis protein
compare
PS417
_08125
-2.7
-0.8
prephenate dehydratase
compare
PS417
_19865
-2.7
-13.7
flagellar hook protein FlgK
compare
PS417
_19860
-2.7
-17.3
flagellar hook protein FlgL
compare
PS417
_23770
-2.7
-1.7
exodeoxyribonuclease V subunit alpha
compare
PS417
_25720
-2.7
-7.6
anthranilate synthase component II
compare
PS417
_04650
-2.7
-1.0
D-alanine--D-alanine ligase
compare
PS417
_19740
-2.6
-6.1
flagellar biosynthesis protein flip
compare
PS417
_19870
-2.6
-5.0
flagellar rod assembly protein FlgJ
compare
PS417
_27800
-2.6
-2.6
exodeoxyribonuclease III
compare
PS417
_26730
-2.6
-1.1
pyrroline-5-carboxylate reductase
compare
PS417
_02000
-2.5
-13.0
glutamate synthase
compare
PS417
_19795
-2.5
-16.4
flagellar assembly protein FliH
compare
PS417
_06540
-2.5
-2.1
membrane protein
compare
PS417
_05635
-2.4
-5.6
membrane protein
compare
PS417
_19880
-2.4
-8.8
flagellar basal body L-ring protein
compare
PS417
_09470
-2.4
-1.4
hypothetical protein
compare
PS417
_19785
-2.4
-3.6
flagellar biogenesis protein
compare
PS417
_19840
-2.4
-11.2
flagellar cap protein FliD
compare
PS417
_21570
-2.4
-9.6
flagellar basal body rod protein FlgB
compare
PS417
_18600
-2.4
-4.1
isopropylmalate isomerase
compare
PS417
_06200
-2.4
-7.4
protein-PII uridylyltransferase
compare
PS417
_21595
-2.4
-5.1
flagellar biosynthesis protein FlgN
compare
PS417
_19755
-2.4
-2.4
flagellar motor switch protein FliM
compare
PS417
_23025
-2.4
-7.1
murein transglycosylase
compare
PS417
_16855
-2.4
-1.9
cation:proton antiporter
compare
PS417
_19690
-2.4
-7.8
histidine kinase
compare
PS417
_18585
-2.4
-6.1
3-isopropylmalate dehydrogenase
compare
PS417
_08130
-2.3
-2.8
aspartate aminotransferase
compare
PS417
_19765
-2.3
-12.7
flagellar hook-length control protein
compare
PS417
_23545
-2.3
-2.5
gamma-glutamyl kinase
compare
PS417
_24705
-2.3
-2.1
D-alanyl-D-alanine carboxypeptidase
compare
PS417
_19885
-2.3
-4.5
flagellar basal body rod protein FlgG
compare
PS417
_19745
-2.3
-11.1
flagellar assembly protein FliO
compare
PS417
_21585
-2.3
-12.0
flagellar basal body P-ring biosynthesis protein FlgA
compare
PS417
_19730
-2.3
-3.0
flagellar biosynthesis protein FliR
compare
PS417
_21555
-2.2
-10.6
flagellar hook protein FlgE
compare
PS417
_20985
-2.2
-2.5
porin
compare
PS417
_19835
-2.2
-2.0
flagellar biosynthesis protein FliS
compare
PS417
_19735
-2.2
-7.8
flagellar biosynthesis protein FliQ
compare
PS417
_03260
-2.2
-1.5
5S ribosomal RNA
compare
PS417
_21565
-2.1
-5.8
flagellar basal body rod protein FlgC
compare
PS417
_23805
-2.1
-5.0
acetolactate synthase 3 regulatory subunit
compare
PS417
_07455
-2.1
-1.8
glutamine amidotransferase
compare
PS417
_19710
-2.1
-11.5
flagellar biosynthesis protein FlhA
compare
PS417
_08135
-2.1
-3.9
3-phosphoshikimate 1-carboxyvinyltransferase
compare
PS417
_18560
-2.1
-9.3
N-(5'-phosphoribosyl)anthranilate isomerase
compare
PS417
_19805
-2.1
-5.3
flagellar M-ring protein FliF
compare
PS417
_09150
-2.0
-2.6
energy transducer TonB
compare
PS417
_19660
-2.0
-6.7
cobalamin biosynthesis protein CobQ
compare
PS417
_25725
-2.0
-10.7
anthranilate synthase component I
compare
PS417
_02415
-2.0
-4.1
phosphoserine phosphatase
compare
PS417
_19665
-2.0
-4.3
flagellar motor protein MotD
compare
PS417
_19695
-2.0
-8.1
flagellar biosynthesis sigma factor
compare
PS417
_02555
-2.0
-9.6
exoribonuclease R
compare
PS417
_01705
-1.9
-8.1
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
(from data)
compare
PS417
_05595
-1.9
-6.3
ornithine carbamoyltransferase
compare
PS417
_27245
-1.9
-3.3
aminotransferase DegT
compare
PS417
_19825
-1.9
-10.4
ATPase AAA
compare
PS417
_02975
-1.9
-3.4
3-dehydroquinate dehydratase
compare
PS417
_23800
-1.8
-6.5
ketol-acid reductoisomerase
compare
PS417
_25715
-1.8
-3.5
anthranilate phosphoribosyltransferase
compare
PS417
_19675
-1.8
-3.8
chemotaxis protein CheY
compare
PS417
_26890
-1.8
-7.0
dihydroxy-acid dehydratase
compare
PS417
_08540
-1.8
-2.3
RNA helicase
compare
PS417
_26850
-1.7
-0.9
twin-arginine translocation pathway signal protein
compare
PS417
_22445
-1.7
-3.1
ATP-dependent DNA helicase RuvB
compare
PS417
_01955
-1.7
-7.5
peptidase
compare
PS417
_27795
-1.7
-0.9
orotate phosphoribosyltransferase
compare
PS417
_18595
-1.7
-3.7
3-isopropylmalate dehydratase
compare
PS417
_00385
-1.7
-1.1
Fur family transcriptional regulator
compare
PS417
_18530
-1.7
-4.1
O-succinylhomoserine sulfhydrylase
compare
PS417
_04390
-1.7
-3.3
toluene tolerance protein
compare
PS417
_19800
-1.7
-3.1
flagellar motor switch protein FliG
compare
PS417
_16465
-1.6
-6.9
sirohydrochlorin ferrochelatase
compare
PS417
_23110
-1.6
-5.9
2-isopropylmalate synthase
compare
PS417
_05575
-1.6
-7.7
Glycerol kinase (EC 2.7.1.30)
(from data)
compare
PS417
_21390
-1.6
-5.8
hypothetical protein
compare
PS417
_01635
-1.6
-3.9
nitrogen regulation protein NR(I)
compare
PS417
_13185
-1.6
-2.1
RND transporter
compare
PS417
_04440
-1.6
-1.6
hypoxanthine-guanine phosphoribosyltransferase
compare
PS417
_13165
-1.5
-2.2
peroxidase
compare
PS417
_16510
-1.5
-2.9
Clp protease ClpX
compare
PS417
_26565
-1.5
-3.7
LysR family transcriptional regulator
compare
PS417
_27835
-1.5
-5.5
endoribonuclease
compare
PS417
_01605
-1.5
-1.3
phosphoglycerate mutase
compare
PS417
_19790
-1.5
-1.5
ATP synthase
compare
PS417
_04380
-1.5
-1.0
ABC transporter permease
compare
PS417
_09460
-1.5
-2.3
alkanesulfonate monooxygenase
compare
PS417
_26745
-1.5
-2.9
methionine biosynthesis protein MetW
compare
PS417
_27195
-1.5
-1.3
N-acetylglutamate synthase
compare
PS417
_23995
-1.5
-0.7
preprotein translocase subunit SecG
compare
PS417
_01640
-1.4
-3.2
histidine kinase
compare
PS417
_03560
-1.4
-1.6
GTP-binding protein
compare
PS417
_11585
-1.4
-2.4
LuxR family transcriptional regulator
compare
PS417
_26695
-1.4
-1.2
uracil phosphoribosyltransferase
compare
PS417
_24585
-1.4
-6.3
AMP nucleosidase
compare
PS417
_06245
-1.4
-1.2
zinc metallopeptidase RseP
compare
PS417
_12290
-1.4
-3.9
sulfite reductase
compare
PS417
_18070
-1.4
-1.0
general secretion pathway protein GspH
compare
PS417
_15085
-1.4
-4.0
ATPase AAA
compare
PS417
_21560
-1.4
-4.5
flagellar basal body rod modification protein FlgD
compare
PS417
_01915
-1.3
-0.7
ATP-dependent protease ATP-binding subunit HslU
compare
PS417
_06375
-1.3
-0.7
deoxycytidine triphosphate deaminase
compare
PS417
_13075
-1.3
-1.1
hypothetical protein
compare
PS417
_12310
-1.3
-4.9
methionine synthase
compare
PS417
_00180
-1.3
-1.4
tryptophan synthase subunit alpha
compare
PS417
_08410
-1.3
-1.6
hypothetical protein
compare
PS417
_23775
-1.3
-1.3
exodeoxyribonuclease V subunit beta
compare
PS417
_22990
-1.3
-1.4
iron dicitrate transport regulator FecR
compare
PS417
_15820
-1.3
-3.0
universal stress protein UspA
compare
PS417
_26985
-1.3
-2.7
phosphoenolpyruvate-protein phosphotransferase
compare
PS417
_07710
-1.3
-4.6
membrane protein
compare
PS417
_19955
-1.3
-1.6
hypothetical protein
compare
PS417
_15105
-1.3
-3.6
membrane protein
compare
PS417
_01750
-1.3
-2.0
histidine ammonia-lyase
compare
PS417
_03385
-1.3
-1.3
flavin reductase
compare
PS417
_19655
-1.3
-2.1
chemotaxis protein CheW
compare
PS417
_26685
-1.3
-1.5
hypothetical protein
compare
PS417
_26740
-1.3
-5.7
homoserine acetyltransferase
compare
PS417
_07170
-1.3
-3.5
hypothetical protein
compare
PS417
_23135
-1.3
-1.2
GTP-binding protein
compare
PS417
_02280
-1.2
-1.3
GlcNAc-PI de-N-acetylase
compare
PS417
_15110
-1.2
-3.7
protein BatD
compare
PS417
_04290
-1.2
-3.8
hypothetical protein
compare
PS417
_27305
-1.2
-4.2
5-formyltetrahydrofolate cyclo-ligase
compare
PS417
_17505
-1.2
-2.7
LuxR family transcriptional regulator
compare
PS417
_21210
-1.2
-1.9
amidotransferase
compare
PS417
_05120
-1.2
-1.3
RNA polymerase subunit sigma-24
compare
PS417
_22570
-1.2
-0.8
H-NS histone
compare
PS417
_27425
-1.1
-4.1
exopolyphosphatase
compare
PS417
_02225
-1.1
-1.6
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
compare
PS417
_21125
-1.1
-3.7
phosphoadenosine phosphosulfate reductase
compare
PS417
_12805
-1.1
-6.9
glycogen branching protein
compare
PS417
_22520
-1.1
-1.4
histidine kinase
compare
PS417
_23210
-1.1
-1.5
serine acetyltransferase
compare
PS417
_23390
-1.1
-4.6
ubiquinol oxidase subunit II
compare
PS417
_04050
-1.1
-1.4
peptide ABC transporter ATP-binding protein
compare
PS417
_24115
-1.1
-1.6
hypothetical protein
compare
PS417
_01715
-1.1
-1.0
hypothetical protein
compare
PS417
_07165
-1.1
-1.6
dihydrodipicolinate synthase
compare
PS417
_08685
-1.1
-1.5
flagellar hook-length control protein FliK
compare
PS417
_10665
-1.1
-2.2
hypothetical protein
compare
PS417
_00045
-1.1
-1.5
glycerol acyltransferase
compare
PS417
_08365
-1.1
-0.9
hypothetical protein
compare
PS417
_27380
-1.1
-1.8
GntR family transcriptional regulator
compare
PS417
_06205
-1.0
-5.1
methionine aminopeptidase
compare
PS417
_02485
-1.0
-2.2
tRNA delta(2)-isopentenylpyrophosphate transferase
compare
PS417
_04385
-1.0
-1.9
organic solvent ABC transporter substrate-binding protein
compare
PS417
_26510
-1.0
-4.3
5,10-methylenetetrahydrofolate reductase
compare
PS417
_09140
-1.0
-1.8
biopolymer transporter ExbB
compare
PS417
_02270
-1.0
-2.9
carbamoyltransferase
compare
PS417
_25650
-1.0
-2.5
anhydro-N-acetylmuramic acid kinase
compare
PS417
_26120
-1.0
-1.1
hypothetical protein
compare
PS417
_00355
-1.0
-1.5
metal ABC transporter permease
compare
PS417
_27295
-1.0
-3.7
hypothetical protein
compare
PS417
_06710
-1.0
-1.5
beta-ketoadipyl CoA thiolase
compare
PS417
_19830
-1.0
-2.7
flagellar assembly protein FliT
compare
PS417
_19275
-1.0
-1.1
hypothetical protein
compare
PS417
_15480
-1.0
-1.2
ABC transporter substrate-binding protein
compare
PS417
_27010
-1.0
-3.7
threonine dehydratase
compare
PS417
_28080
-1.0
-6.2
phosphate ABC transporter permease
compare
PS417
_20025
-1.0
-1.4
alpha-ribazole phosphatase
compare
PS417
_18570
-1.0
-3.2
peptidoglycan-binding protein
compare
PS417
_05100
-1.0
-1.5
RNA polymerase sigma factor
compare
PS417
_26270
-1.0
-1.2
AraC family transcriptional regulator
compare
PS417
_18455
-1.0
-1.5
hypothetical protein
compare
PS417
_24155
-1.0
-1.3
ATP-binding protein
compare
PS417
_28315
-1.0
-2.1
zinc ABC transporter permease
compare
PS417
_05580
-0.9
-4.2
glycerol uptake facilitator GlpF
compare
PS417
_12355
-0.9
-1.9
magnesium chelatase
compare
PS417
_04595
-0.9
-1.5
cell division protein MraZ
compare
PS417
_03100
-0.9
-0.8
pilus assembly protein
compare
PS417
_13055
-0.9
-0.9
aminotransferase
compare
PS417
_17035
-0.9
-1.0
Cro/Cl family transcriptional regulator
compare
PS417
_12375
-0.9
-1.2
serine/threonine protein phosphatase
compare
PS417
_14080
-0.9
-2.0
hypothetical protein
compare
PS417
_23375
-0.9
-0.9
cytochrome C oxidase
compare
PS417
_13300
-0.9
-1.0
short-chain dehydrogenase
compare
PS417
_21035
-0.9
-4.6
multidrug transporter
compare
PS417
_09730
-0.9
-1.6
adenylylsulfate kinase
compare
PS417
_24840
-0.9
-1.5
hypothetical protein
compare
Specific Phenotypes
For 2 genes in this experiment