Experiment set19IT033 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_21430 -4.9 -3.2 3-oxoacyl-ACP synthase compare
PS417_27040 -4.6 -4.0 3-phosphoglycerate dehydrogenase compare
PS417_27865 -4.4 -3.7 LysR family transcriptional regulator compare
PS417_25710 -4.2 -1.8 indole-3-glycerol-phosphate synthase compare
PS417_27870 -4.1 -4.8 ATP-dependent DNA helicase RecG compare
PS417_24745 -4.0 -4.5 gamma-glutamyl phosphate reductase compare
PS417_21630 -3.6 -3.5 magnesium transporter compare
PS417_05815 -3.5 -6.3 recombinase RecA compare
PS417_12855 -3.4 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_00185 -3.2 -4.0 tryptophan synthase subunit beta compare
PS417_23810 -3.2 -9.5 acetolactate synthase 3 catalytic subunit compare
PS417_19850 -3.1 -9.6 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_19725 -2.9 -8.7 flagellar biosynthesis protein FlhB compare
PS417_06680 -2.9 -8.2 nuclease PIN compare
PS417_22565 -2.8 -1.2 formyltetrahydrofolate deformylase compare
PS417_19650 -2.8 -4.8 chemotaxis protein CheW compare
PS417_02005 -2.8 -10.9 glutamate synthase compare
PS417_18310 -2.8 -1.6 hypothetical protein compare
PS417_21575 -2.7 -8.7 chemotaxis protein compare
PS417_08125 -2.7 -0.8 prephenate dehydratase compare
PS417_19865 -2.7 -13.7 flagellar hook protein FlgK compare
PS417_19860 -2.7 -17.3 flagellar hook protein FlgL compare
PS417_23770 -2.7 -1.7 exodeoxyribonuclease V subunit alpha compare
PS417_25720 -2.7 -7.6 anthranilate synthase component II compare
PS417_04650 -2.7 -1.0 D-alanine--D-alanine ligase compare
PS417_19740 -2.6 -6.1 flagellar biosynthesis protein flip compare
PS417_19870 -2.6 -5.0 flagellar rod assembly protein FlgJ compare
PS417_27800 -2.6 -2.6 exodeoxyribonuclease III compare
PS417_26730 -2.6 -1.1 pyrroline-5-carboxylate reductase compare
PS417_02000 -2.5 -13.0 glutamate synthase compare
PS417_19795 -2.5 -16.4 flagellar assembly protein FliH compare
PS417_06540 -2.5 -2.1 membrane protein compare
PS417_05635 -2.4 -5.6 membrane protein compare
PS417_19880 -2.4 -8.8 flagellar basal body L-ring protein compare
PS417_09470 -2.4 -1.4 hypothetical protein compare
PS417_19785 -2.4 -3.6 flagellar biogenesis protein compare
PS417_19840 -2.4 -11.2 flagellar cap protein FliD compare
PS417_21570 -2.4 -9.6 flagellar basal body rod protein FlgB compare
PS417_18600 -2.4 -4.1 isopropylmalate isomerase compare
PS417_06200 -2.4 -7.4 protein-PII uridylyltransferase compare
PS417_21595 -2.4 -5.1 flagellar biosynthesis protein FlgN compare
PS417_19755 -2.4 -2.4 flagellar motor switch protein FliM compare
PS417_23025 -2.4 -7.1 murein transglycosylase compare
PS417_16855 -2.4 -1.9 cation:proton antiporter compare
PS417_19690 -2.4 -7.8 histidine kinase compare
PS417_18585 -2.4 -6.1 3-isopropylmalate dehydrogenase compare
PS417_08130 -2.3 -2.8 aspartate aminotransferase compare
PS417_19765 -2.3 -12.7 flagellar hook-length control protein compare
PS417_23545 -2.3 -2.5 gamma-glutamyl kinase compare
PS417_24705 -2.3 -2.1 D-alanyl-D-alanine carboxypeptidase compare
PS417_19885 -2.3 -4.5 flagellar basal body rod protein FlgG compare
PS417_19745 -2.3 -11.1 flagellar assembly protein FliO compare
PS417_21585 -2.3 -12.0 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_19730 -2.3 -3.0 flagellar biosynthesis protein FliR compare
PS417_21555 -2.2 -10.6 flagellar hook protein FlgE compare
PS417_20985 -2.2 -2.5 porin compare
PS417_19835 -2.2 -2.0 flagellar biosynthesis protein FliS compare
PS417_19735 -2.2 -7.8 flagellar biosynthesis protein FliQ compare
PS417_03260 -2.2 -1.5 5S ribosomal RNA compare
PS417_21565 -2.1 -5.8 flagellar basal body rod protein FlgC compare
PS417_23805 -2.1 -5.0 acetolactate synthase 3 regulatory subunit compare
PS417_07455 -2.1 -1.8 glutamine amidotransferase compare
PS417_19710 -2.1 -11.5 flagellar biosynthesis protein FlhA compare
PS417_08135 -2.1 -3.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_18560 -2.1 -9.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_19805 -2.1 -5.3 flagellar M-ring protein FliF compare
PS417_09150 -2.0 -2.6 energy transducer TonB compare
PS417_19660 -2.0 -6.7 cobalamin biosynthesis protein CobQ compare
PS417_25725 -2.0 -10.7 anthranilate synthase component I compare
PS417_02415 -2.0 -4.1 phosphoserine phosphatase compare
PS417_19665 -2.0 -4.3 flagellar motor protein MotD compare
PS417_19695 -2.0 -8.1 flagellar biosynthesis sigma factor compare
PS417_02555 -2.0 -9.6 exoribonuclease R compare
PS417_01705 -1.9 -8.1 Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data) compare
PS417_05595 -1.9 -6.3 ornithine carbamoyltransferase compare
PS417_27245 -1.9 -3.3 aminotransferase DegT compare
PS417_19825 -1.9 -10.4 ATPase AAA compare
PS417_02975 -1.9 -3.4 3-dehydroquinate dehydratase compare
PS417_23800 -1.8 -6.5 ketol-acid reductoisomerase compare
PS417_25715 -1.8 -3.5 anthranilate phosphoribosyltransferase compare
PS417_19675 -1.8 -3.8 chemotaxis protein CheY compare
PS417_26890 -1.8 -7.0 dihydroxy-acid dehydratase compare
PS417_08540 -1.8 -2.3 RNA helicase compare
PS417_26850 -1.7 -0.9 twin-arginine translocation pathway signal protein compare
PS417_22445 -1.7 -3.1 ATP-dependent DNA helicase RuvB compare
PS417_01955 -1.7 -7.5 peptidase compare
PS417_27795 -1.7 -0.9 orotate phosphoribosyltransferase compare
PS417_18595 -1.7 -3.7 3-isopropylmalate dehydratase compare
PS417_00385 -1.7 -1.1 Fur family transcriptional regulator compare
PS417_18530 -1.7 -4.1 O-succinylhomoserine sulfhydrylase compare
PS417_04390 -1.7 -3.3 toluene tolerance protein compare
PS417_19800 -1.7 -3.1 flagellar motor switch protein FliG compare
PS417_16465 -1.6 -6.9 sirohydrochlorin ferrochelatase compare
PS417_23110 -1.6 -5.9 2-isopropylmalate synthase compare
PS417_05575 -1.6 -7.7 Glycerol kinase (EC 2.7.1.30) (from data) compare
PS417_21390 -1.6 -5.8 hypothetical protein compare
PS417_01635 -1.6 -3.9 nitrogen regulation protein NR(I) compare
PS417_13185 -1.6 -2.1 RND transporter compare
PS417_04440 -1.6 -1.6 hypoxanthine-guanine phosphoribosyltransferase compare
PS417_13165 -1.5 -2.2 peroxidase compare
PS417_16510 -1.5 -2.9 Clp protease ClpX compare
PS417_26565 -1.5 -3.7 LysR family transcriptional regulator compare
PS417_27835 -1.5 -5.5 endoribonuclease compare
PS417_01605 -1.5 -1.3 phosphoglycerate mutase compare
PS417_19790 -1.5 -1.5 ATP synthase compare
PS417_04380 -1.5 -1.0 ABC transporter permease compare
PS417_09460 -1.5 -2.3 alkanesulfonate monooxygenase compare
PS417_26745 -1.5 -2.9 methionine biosynthesis protein MetW compare
PS417_27195 -1.5 -1.3 N-acetylglutamate synthase compare
PS417_23995 -1.5 -0.7 preprotein translocase subunit SecG compare
PS417_01640 -1.4 -3.2 histidine kinase compare
PS417_03560 -1.4 -1.6 GTP-binding protein compare
PS417_11585 -1.4 -2.4 LuxR family transcriptional regulator compare
PS417_26695 -1.4 -1.2 uracil phosphoribosyltransferase compare
PS417_24585 -1.4 -6.3 AMP nucleosidase compare
PS417_06245 -1.4 -1.2 zinc metallopeptidase RseP compare
PS417_12290 -1.4 -3.9 sulfite reductase compare
PS417_18070 -1.4 -1.0 general secretion pathway protein GspH compare
PS417_15085 -1.4 -4.0 ATPase AAA compare
PS417_21560 -1.4 -4.5 flagellar basal body rod modification protein FlgD compare
PS417_01915 -1.3 -0.7 ATP-dependent protease ATP-binding subunit HslU compare
PS417_06375 -1.3 -0.7 deoxycytidine triphosphate deaminase compare
PS417_13075 -1.3 -1.1 hypothetical protein compare
PS417_12310 -1.3 -4.9 methionine synthase compare
PS417_00180 -1.3 -1.4 tryptophan synthase subunit alpha compare
PS417_08410 -1.3 -1.6 hypothetical protein compare
PS417_23775 -1.3 -1.3 exodeoxyribonuclease V subunit beta compare
PS417_22990 -1.3 -1.4 iron dicitrate transport regulator FecR compare
PS417_15820 -1.3 -3.0 universal stress protein UspA compare
PS417_26985 -1.3 -2.7 phosphoenolpyruvate-protein phosphotransferase compare
PS417_07710 -1.3 -4.6 membrane protein compare
PS417_19955 -1.3 -1.6 hypothetical protein compare
PS417_15105 -1.3 -3.6 membrane protein compare
PS417_01750 -1.3 -2.0 histidine ammonia-lyase compare
PS417_03385 -1.3 -1.3 flavin reductase compare
PS417_19655 -1.3 -2.1 chemotaxis protein CheW compare
PS417_26685 -1.3 -1.5 hypothetical protein compare
PS417_26740 -1.3 -5.7 homoserine acetyltransferase compare
PS417_07170 -1.3 -3.5 hypothetical protein compare
PS417_23135 -1.3 -1.2 GTP-binding protein compare
PS417_02280 -1.2 -1.3 GlcNAc-PI de-N-acetylase compare
PS417_15110 -1.2 -3.7 protein BatD compare
PS417_04290 -1.2 -3.8 hypothetical protein compare
PS417_27305 -1.2 -4.2 5-formyltetrahydrofolate cyclo-ligase compare
PS417_17505 -1.2 -2.7 LuxR family transcriptional regulator compare
PS417_21210 -1.2 -1.9 amidotransferase compare
PS417_05120 -1.2 -1.3 RNA polymerase subunit sigma-24 compare
PS417_22570 -1.2 -0.8 H-NS histone compare
PS417_27425 -1.1 -4.1 exopolyphosphatase compare
PS417_02225 -1.1 -1.6 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_21125 -1.1 -3.7 phosphoadenosine phosphosulfate reductase compare
PS417_12805 -1.1 -6.9 glycogen branching protein compare
PS417_22520 -1.1 -1.4 histidine kinase compare
PS417_23210 -1.1 -1.5 serine acetyltransferase compare
PS417_23390 -1.1 -4.6 ubiquinol oxidase subunit II compare
PS417_04050 -1.1 -1.4 peptide ABC transporter ATP-binding protein compare
PS417_24115 -1.1 -1.6 hypothetical protein compare
PS417_01715 -1.1 -1.0 hypothetical protein compare
PS417_07165 -1.1 -1.6 dihydrodipicolinate synthase compare
PS417_08685 -1.1 -1.5 flagellar hook-length control protein FliK compare
PS417_10665 -1.1 -2.2 hypothetical protein compare
PS417_00045 -1.1 -1.5 glycerol acyltransferase compare
PS417_08365 -1.1 -0.9 hypothetical protein compare
PS417_27380 -1.1 -1.8 GntR family transcriptional regulator compare
PS417_06205 -1.0 -5.1 methionine aminopeptidase compare
PS417_02485 -1.0 -2.2 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_04385 -1.0 -1.9 organic solvent ABC transporter substrate-binding protein compare
PS417_26510 -1.0 -4.3 5,10-methylenetetrahydrofolate reductase compare
PS417_09140 -1.0 -1.8 biopolymer transporter ExbB compare
PS417_02270 -1.0 -2.9 carbamoyltransferase compare
PS417_25650 -1.0 -2.5 anhydro-N-acetylmuramic acid kinase compare
PS417_26120 -1.0 -1.1 hypothetical protein compare
PS417_00355 -1.0 -1.5 metal ABC transporter permease compare
PS417_27295 -1.0 -3.7 hypothetical protein compare
PS417_06710 -1.0 -1.5 beta-ketoadipyl CoA thiolase compare
PS417_19830 -1.0 -2.7 flagellar assembly protein FliT compare
PS417_19275 -1.0 -1.1 hypothetical protein compare
PS417_15480 -1.0 -1.2 ABC transporter substrate-binding protein compare
PS417_27010 -1.0 -3.7 threonine dehydratase compare
PS417_28080 -1.0 -6.2 phosphate ABC transporter permease compare
PS417_20025 -1.0 -1.4 alpha-ribazole phosphatase compare
PS417_18570 -1.0 -3.2 peptidoglycan-binding protein compare
PS417_05100 -1.0 -1.5 RNA polymerase sigma factor compare
PS417_26270 -1.0 -1.2 AraC family transcriptional regulator compare
PS417_18455 -1.0 -1.5 hypothetical protein compare
PS417_24155 -1.0 -1.3 ATP-binding protein compare
PS417_28315 -1.0 -2.1 zinc ABC transporter permease compare
PS417_05580 -0.9 -4.2 glycerol uptake facilitator GlpF compare
PS417_12355 -0.9 -1.9 magnesium chelatase compare
PS417_04595 -0.9 -1.5 cell division protein MraZ compare
PS417_03100 -0.9 -0.8 pilus assembly protein compare
PS417_13055 -0.9 -0.9 aminotransferase compare
PS417_17035 -0.9 -1.0 Cro/Cl family transcriptional regulator compare
PS417_12375 -0.9 -1.2 serine/threonine protein phosphatase compare
PS417_14080 -0.9 -2.0 hypothetical protein compare
PS417_23375 -0.9 -0.9 cytochrome C oxidase compare
PS417_13300 -0.9 -1.0 short-chain dehydrogenase compare
PS417_21035 -0.9 -4.6 multidrug transporter compare
PS417_09730 -0.9 -1.6 adenylylsulfate kinase compare
PS417_24840 -0.9 -1.5 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment