Experiment set19IT031 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_18310 -3.9 -2.9 hypothetical protein compare
PS417_27865 -3.4 -3.3 LysR family transcriptional regulator compare
PS417_23805 -3.4 -4.6 acetolactate synthase 3 regulatory subunit compare
PS417_22565 -3.3 -1.4 formyltetrahydrofolate deformylase compare
PS417_27800 -3.0 -2.9 exodeoxyribonuclease III compare
PS417_27795 -2.9 -1.2 orotate phosphoribosyltransferase compare
PS417_26730 -2.8 -1.2 pyrroline-5-carboxylate reductase compare
PS417_22450 -2.8 -2.0 ATP-dependent DNA helicase RuvA compare
PS417_02280 -2.7 -2.0 GlcNAc-PI de-N-acetylase compare
PS417_27585 -2.7 -3.0 diaminopimelate epimerase compare
PS417_23545 -2.7 -3.4 gamma-glutamyl kinase compare
PS417_23770 -2.6 -2.4 exodeoxyribonuclease V subunit alpha compare
PS417_01915 -2.5 -1.1 ATP-dependent protease ATP-binding subunit HslU compare
PS417_23810 -2.4 -10.3 acetolactate synthase 3 catalytic subunit compare
PS417_04420 -2.4 -10.4 histidinol dehydrogenase compare
PS417_02415 -2.4 -4.7 phosphoserine phosphatase compare
PS417_24745 -2.3 -4.6 gamma-glutamyl phosphate reductase compare
PS417_27195 -2.2 -1.8 N-acetylglutamate synthase compare
PS417_27300 -2.2 -1.1 cell division protein ZapA compare
PS417_25710 -2.1 -2.0 indole-3-glycerol-phosphate synthase compare
PS417_04595 -2.1 -2.8 cell division protein MraZ compare
PS417_19690 -2.1 -5.0 histidine kinase compare
PS417_00185 -2.1 -3.8 tryptophan synthase subunit beta compare
PS417_18560 -2.1 -7.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_08135 -2.0 -5.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_23995 -2.0 -1.0 preprotein translocase subunit SecG compare
PS417_23025 -1.9 -5.5 murein transglycosylase compare
PS417_01575 -1.9 -5.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_01605 -1.8 -1.2 phosphoglycerate mutase compare
PS417_15105 -1.8 -6.2 membrane protein compare
PS417_01570 -1.8 -3.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_20985 -1.8 -2.0 porin compare
PS417_04375 -1.8 -1.9 ABC transporter ATP-binding protein compare
PS417_02005 -1.7 -7.6 glutamate synthase compare
PS417_12310 -1.7 -6.9 methionine synthase compare
PS417_26815 -1.7 -2.5 peptidase M16 compare
PS417_12855 -1.7 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19835 -1.7 -2.2 flagellar biosynthesis protein FliS compare
PS417_27870 -1.7 -3.2 ATP-dependent DNA helicase RecG compare
PS417_04650 -1.6 -1.2 D-alanine--D-alanine ligase compare
PS417_27305 -1.6 -6.8 5-formyltetrahydrofolate cyclo-ligase compare
PS417_06680 -1.6 -5.2 nuclease PIN compare
PS417_05635 -1.6 -6.3 membrane protein compare
PS417_24935 -1.6 -1.3 hypothetical protein compare
PS417_04415 -1.6 -5.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_02555 -1.6 -7.7 exoribonuclease R compare
PS417_02000 -1.5 -7.3 glutamate synthase compare
PS417_21575 -1.5 -3.7 chemotaxis protein compare
PS417_20610 -1.5 -1.9 hypothetical protein compare
PS417_01565 -1.5 -3.3 imidazole glycerol phosphate synthase compare
PS417_25725 -1.5 -9.4 anthranilate synthase component I compare
PS417_28070 -1.5 -6.4 phosphate ABC transporter ATP-binding protein compare
PS417_11615 -1.5 -1.8 urea ABC transporter ATP-binding protein compare
PS417_23800 -1.5 -6.6 ketol-acid reductoisomerase compare
PS417_04440 -1.5 -2.8 hypoxanthine-guanine phosphoribosyltransferase compare
PS417_19660 -1.5 -6.2 cobalamin biosynthesis protein CobQ compare
PS417_25720 -1.5 -4.6 anthranilate synthase component II compare
PS417_02575 -1.5 -2.9 membrane protein compare
PS417_19350 -1.4 -3.5 GTP cyclohydrolase compare
PS417_18585 -1.4 -3.9 3-isopropylmalate dehydrogenase compare
PS417_04915 -1.4 -1.9 glutamine ABC transporter ATP-binding protein compare
PS417_14555 -1.4 -2.4 AsnC family transcriptional regulator compare
PS417_01580 -1.4 -1.6 imidazole glycerol phosphate synthase compare
PS417_07560 -1.4 -1.7 universal stress protein UspA compare
PS417_15650 -1.4 -1.9 glutamine amidotransferase compare
PS417_27425 -1.4 -6.0 exopolyphosphatase compare
PS417_04380 -1.4 -0.9 ABC transporter permease compare
PS417_16510 -1.4 -3.4 Clp protease ClpX compare
PS417_28080 -1.4 -8.0 phosphate ABC transporter permease compare
PS417_26985 -1.4 -3.9 phosphoenolpyruvate-protein phosphotransferase compare
PS417_03100 -1.3 -1.2 pilus assembly protein compare
PS417_02820 -1.3 -1.5 urea ABC transporter ATP-binding protein compare
PS417_26890 -1.3 -5.2 dihydroxy-acid dehydratase compare
PS417_27835 -1.3 -4.0 endoribonuclease compare
PS417_01850 -1.3 -2.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_07710 -1.3 -5.0 membrane protein compare
PS417_01635 -1.2 -4.9 nitrogen regulation protein NR(I) compare
PS417_26745 -1.2 -3.8 methionine biosynthesis protein MetW compare
PS417_22360 -1.2 -4.4 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) compare
PS417_08125 -1.2 -0.5 prephenate dehydratase compare
PS417_04390 -1.2 -2.1 toluene tolerance protein compare
PS417_08245 -1.2 -1.0 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_00385 -1.2 -1.1 Fur family transcriptional regulator compare
PS417_04385 -1.2 -2.4 organic solvent ABC transporter substrate-binding protein compare
PS417_02255 -1.2 -2.3 lipopolysaccharide kinase compare
PS417_13165 -1.2 -2.2 peroxidase compare
PS417_06200 -1.1 -4.3 protein-PII uridylyltransferase compare
PS417_05595 -1.1 -5.9 ornithine carbamoyltransferase compare
PS417_24560 -1.1 -1.9 ferrous iron transporter compare
PS417_26990 -1.1 -0.7 RNA pyrophosphohydrolase compare
PS417_14940 -1.1 -1.6 LysR family transcriptional regulator compare
PS417_01920 -1.1 -1.0 ATP-dependent protease subunit HslV compare
PS417_13205 -1.1 -1.5 isochorismate-pyruvate lyase compare
PS417_01640 -1.1 -2.2 histidine kinase compare
PS417_19650 -1.1 -3.0 chemotaxis protein CheW compare
PS417_22355 -1.1 -3.7 glycine cleavage system protein H compare
PS417_08410 -1.1 -2.2 hypothetical protein compare
PS417_18595 -1.1 -3.5 3-isopropylmalate dehydratase compare
PS417_16490 -1.1 -1.4 cell division protein FtsK compare
PS417_24705 -1.1 -2.1 D-alanyl-D-alanine carboxypeptidase compare
PS417_26335 -1.1 -2.3 BetI family transcriptional regulator compare
PS417_04365 -1.1 -1.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_18530 -1.1 -3.0 O-succinylhomoserine sulfhydrylase compare
PS417_21565 -1.0 -3.5 flagellar basal body rod protein FlgC compare
PS417_19830 -1.0 -4.0 flagellar assembly protein FliT compare
PS417_15875 -1.0 -1.6 LuxR family transcriptional regulator compare
PS417_19870 -1.0 -3.6 flagellar rod assembly protein FlgJ compare
PS417_19705 -1.0 -1.5 flagellar biosynthesis regulator FlhF compare
PS417_21480 -1.0 -0.8 23S rRNA pseudouridylate synthase compare
PS417_01855 -1.0 -2.1 phosphoribosyl-AMP cyclohydrolase compare
PS417_23765 -1.0 -1.8 hypothetical protein compare
PS417_06205 -1.0 -5.7 methionine aminopeptidase compare
PS417_04530 -1.0 -1.6 glycerate dehydrogenase compare
PS417_04410 -1.0 -1.2 hypothetical protein compare
PS417_24500 -1.0 -2.5 DEAD/DEAH box helicase compare
PS417_01620 -1.0 -1.5 preprotein translocase subunit SecB compare
PS417_26370 -1.0 -1.9 RNA helicase compare
PS417_19190 -1.0 -2.1 BolA family transcriptional regulator compare
PS417_27245 -1.0 -2.7 aminotransferase DegT compare
PS417_15110 -1.0 -3.3 protein BatD compare
PS417_01955 -1.0 -4.3 peptidase compare
PS417_04585 -1.0 -1.3 hypothetical protein compare
PS417_08540 -1.0 -2.0 RNA helicase compare
PS417_15135 -1.0 -1.1 hypothetical protein compare
PS417_22300 -1.0 -1.2 LTXXQ domain protein compare
PS417_27875 -1.0 -4.0 histidine kinase compare
PS417_06150 -0.9 -1.7 SAM-dependent methlyltransferase compare
PS417_22370 -0.9 -3.5 Aminomethyltransferase (EC 2.1.2.10) (from data) compare
PS417_21705 -0.9 -3.6 arginine N-succinyltransferase compare
PS417_03260 -0.9 -1.2 5S ribosomal RNA compare
PS417_02510 -0.9 -2.1 ATP phosphoribosyltransferase regulatory subunit compare
PS417_28075 -0.9 -3.8 phosphate ABC transporter permease compare
PS417_15780 -0.9 -2.7 membrane protein compare
PS417_23900 -0.9 -4.7 poly(A) polymerase compare
PS417_18600 -0.9 -1.3 isopropylmalate isomerase compare
PS417_16990 -0.9 -4.3 acyl-CoA dehydrogenase compare
PS417_19850 -0.9 -4.9 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_15090 -0.9 -1.6 hypothetical protein compare
PS417_16720 -0.9 -1.1 membrane protein compare
PS417_12290 -0.9 -3.9 sulfite reductase compare
PS417_19095 -0.9 -1.5 hypothetical protein compare
PS417_21430 -0.9 -1.5 3-oxoacyl-ACP synthase compare
PS417_16695 -0.9 -1.7 hypothetical protein compare
PS417_00220 -0.9 -1.4 hypothetical protein compare
PS417_27040 -0.9 -1.3 3-phosphoglycerate dehydrogenase compare
PS417_24125 -0.9 -2.1 hypothetical protein compare
PS417_06245 -0.9 -1.1 zinc metallopeptidase RseP compare
PS417_19860 -0.9 -5.7 flagellar hook protein FlgL compare
PS417_28085 -0.9 -5.5 phosphate-binding protein compare
PS417_22895 -0.9 -3.3 tyrosine recombinase XerD compare
PS417_14425 -0.8 -2.4 alkylhydroperoxidase compare
PS417_19840 -0.8 -5.1 flagellar cap protein FliD compare
PS417_15465 -0.8 -2.0 carboxynorspermidine decarboxylase compare
PS417_21035 -0.8 -4.2 multidrug transporter compare
PS417_16045 -0.8 -0.9 acyl-CoA dehydrogenase compare
PS417_02365 -0.8 -1.3 hypothetical protein compare
PS417_07615 -0.8 -3.2 TetR family transcriptional regulator compare
PS417_25715 -0.8 -2.7 anthranilate phosphoribosyltransferase compare
PS417_19730 -0.8 -1.7 flagellar biosynthesis protein FliR compare
PS417_19865 -0.8 -5.5 flagellar hook protein FlgK compare
PS417_22445 -0.8 -0.9 ATP-dependent DNA helicase RuvB compare
PS417_03560 -0.8 -1.1 GTP-binding protein compare
PS417_19785 -0.8 -2.8 flagellar biogenesis protein compare
PS417_22350 -0.8 -1.4 Fis family transcriptional regulator compare
PS417_19765 -0.8 -4.1 flagellar hook-length control protein compare
PS417_06685 -0.8 -0.7 beta-ketoadipyl CoA thiolase compare
PS417_09725 -0.8 -3.5 transporter compare
PS417_26740 -0.8 -4.4 homoserine acetyltransferase compare
PS417_02160 -0.8 -1.0 hypothetical protein compare
PS417_16520 -0.8 -1.1 cold-shock protein compare
PS417_21630 -0.8 -1.7 magnesium transporter compare
PS417_26390 -0.8 -0.9 acyltransferase compare
PS417_25650 -0.8 -3.4 anhydro-N-acetylmuramic acid kinase compare
PS417_20855 -0.8 -0.9 hypothetical protein compare
PS417_11475 -0.8 -1.7 membrane protein compare
PS417_08365 -0.8 -0.8 hypothetical protein compare
PS417_20340 -0.8 -1.3 hypothetical protein compare
PS417_03525 -0.8 -1.2 hypothetical protein compare
PS417_12805 -0.8 -4.6 glycogen branching protein compare
PS417_10095 -0.7 -1.4 hypothetical protein compare
PS417_01560 -0.7 -1.2 imidazoleglycerol-phosphate dehydratase compare
PS417_07575 -0.7 -1.9 multifunctional fatty acid oxidation complex subunit alpha compare
PS417_19665 -0.7 -2.7 flagellar motor protein MotD compare
PS417_15665 -0.7 -1.3 hypothetical protein compare
PS417_16535 -0.7 -1.9 NUDIX hydrolase compare
PS417_23950 -0.7 -1.2 polynucleotide phosphorylase/polyadenylase compare
PS417_14045 -0.7 -1.6 alkyl hydroperoxide reductase compare
PS417_02980 -0.7 -0.7 chemotaxis protein compare
PS417_16465 -0.7 -3.7 sirohydrochlorin ferrochelatase compare
PS417_00180 -0.7 -0.9 tryptophan synthase subunit alpha compare
PS417_01340 -0.7 -2.9 agmatine deiminase compare
PS417_27505 -0.7 -2.4 transcriptional regulator compare
PS417_20635 -0.7 -0.7 ABC transporter ATP-binding protein compare
PS417_27010 -0.7 -4.3 threonine dehydratase compare
PS417_05065 -0.7 -1.3 hypothetical protein compare
PS417_26155 -0.7 -1.4 hypothetical protein compare
PS417_08545 -0.7 -1.3 aromatic ring-opening dioxygenase LigB compare
PS417_19655 -0.7 -1.7 chemotaxis protein CheW compare
PS417_27615 -0.7 -3.0 ammonia channel protein compare
PS417_21830 -0.7 -2.0 TetR family transcriptional regulator compare


Specific Phenotypes

For 2 genes in this experiment