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Experiment set19IT031 for
Pseudomonas simiae WCS417
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Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
200 most important genes:
gene
name
fitness
t score
description
PS417
_18310
-3.9
-2.9
hypothetical protein
compare
PS417
_27865
-3.4
-3.3
LysR family transcriptional regulator
compare
PS417
_23805
-3.4
-4.6
acetolactate synthase 3 regulatory subunit
compare
PS417
_22565
-3.3
-1.4
formyltetrahydrofolate deformylase
compare
PS417
_27800
-3.0
-2.9
exodeoxyribonuclease III
compare
PS417
_27795
-2.9
-1.2
orotate phosphoribosyltransferase
compare
PS417
_26730
-2.8
-1.2
pyrroline-5-carboxylate reductase
compare
PS417
_22450
-2.8
-2.0
ATP-dependent DNA helicase RuvA
compare
PS417
_02280
-2.7
-2.0
GlcNAc-PI de-N-acetylase
compare
PS417
_27585
-2.7
-3.0
diaminopimelate epimerase
compare
PS417
_23545
-2.7
-3.4
gamma-glutamyl kinase
compare
PS417
_23770
-2.6
-2.4
exodeoxyribonuclease V subunit alpha
compare
PS417
_01915
-2.5
-1.1
ATP-dependent protease ATP-binding subunit HslU
compare
PS417
_23810
-2.4
-10.3
acetolactate synthase 3 catalytic subunit
compare
PS417
_04420
-2.4
-10.4
histidinol dehydrogenase
compare
PS417
_02415
-2.4
-4.7
phosphoserine phosphatase
compare
PS417
_24745
-2.3
-4.6
gamma-glutamyl phosphate reductase
compare
PS417
_27195
-2.2
-1.8
N-acetylglutamate synthase
compare
PS417
_27300
-2.2
-1.1
cell division protein ZapA
compare
PS417
_25710
-2.1
-2.0
indole-3-glycerol-phosphate synthase
compare
PS417
_04595
-2.1
-2.8
cell division protein MraZ
compare
PS417
_19690
-2.1
-5.0
histidine kinase
compare
PS417
_00185
-2.1
-3.8
tryptophan synthase subunit beta
compare
PS417
_18560
-2.1
-7.6
N-(5'-phosphoribosyl)anthranilate isomerase
compare
PS417
_08135
-2.0
-5.1
3-phosphoshikimate 1-carboxyvinyltransferase
compare
PS417
_23995
-2.0
-1.0
preprotein translocase subunit SecG
compare
PS417
_23025
-1.9
-5.5
murein transglycosylase
compare
PS417
_01575
-1.9
-5.4
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
(from data)
compare
PS417
_01605
-1.8
-1.2
phosphoglycerate mutase
compare
PS417
_15105
-1.8
-6.2
membrane protein
compare
PS417
_01570
-1.8
-3.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
compare
PS417
_20985
-1.8
-2.0
porin
compare
PS417
_04375
-1.8
-1.9
ABC transporter ATP-binding protein
compare
PS417
_02005
-1.7
-7.6
glutamate synthase
compare
PS417
_12310
-1.7
-6.9
methionine synthase
compare
PS417
_26815
-1.7
-2.5
peptidase M16
compare
PS417
_12855
-1.7
-3.7
3-phosphoshikimate 1-carboxyvinyltransferase
compare
PS417
_19835
-1.7
-2.2
flagellar biosynthesis protein FliS
compare
PS417
_27870
-1.7
-3.2
ATP-dependent DNA helicase RecG
compare
PS417
_04650
-1.6
-1.2
D-alanine--D-alanine ligase
compare
PS417
_27305
-1.6
-6.8
5-formyltetrahydrofolate cyclo-ligase
compare
PS417
_06680
-1.6
-5.2
nuclease PIN
compare
PS417
_05635
-1.6
-6.3
membrane protein
compare
PS417
_24935
-1.6
-1.3
hypothetical protein
compare
PS417
_04415
-1.6
-5.2
ATP phosphoribosyltransferase (EC 2.4.2.17)
(from data)
compare
PS417
_02555
-1.6
-7.7
exoribonuclease R
compare
PS417
_02000
-1.5
-7.3
glutamate synthase
compare
PS417
_21575
-1.5
-3.7
chemotaxis protein
compare
PS417
_20610
-1.5
-1.9
hypothetical protein
compare
PS417
_01565
-1.5
-3.3
imidazole glycerol phosphate synthase
compare
PS417
_25725
-1.5
-9.4
anthranilate synthase component I
compare
PS417
_28070
-1.5
-6.4
phosphate ABC transporter ATP-binding protein
compare
PS417
_11615
-1.5
-1.8
urea ABC transporter ATP-binding protein
compare
PS417
_23800
-1.5
-6.6
ketol-acid reductoisomerase
compare
PS417
_04440
-1.5
-2.8
hypoxanthine-guanine phosphoribosyltransferase
compare
PS417
_19660
-1.5
-6.2
cobalamin biosynthesis protein CobQ
compare
PS417
_25720
-1.5
-4.6
anthranilate synthase component II
compare
PS417
_02575
-1.5
-2.9
membrane protein
compare
PS417
_19350
-1.4
-3.5
GTP cyclohydrolase
compare
PS417
_18585
-1.4
-3.9
3-isopropylmalate dehydrogenase
compare
PS417
_04915
-1.4
-1.9
glutamine ABC transporter ATP-binding protein
compare
PS417
_14555
-1.4
-2.4
AsnC family transcriptional regulator
compare
PS417
_01580
-1.4
-1.6
imidazole glycerol phosphate synthase
compare
PS417
_07560
-1.4
-1.7
universal stress protein UspA
compare
PS417
_15650
-1.4
-1.9
glutamine amidotransferase
compare
PS417
_27425
-1.4
-6.0
exopolyphosphatase
compare
PS417
_04380
-1.4
-0.9
ABC transporter permease
compare
PS417
_16510
-1.4
-3.4
Clp protease ClpX
compare
PS417
_28080
-1.4
-8.0
phosphate ABC transporter permease
compare
PS417
_26985
-1.4
-3.9
phosphoenolpyruvate-protein phosphotransferase
compare
PS417
_03100
-1.3
-1.2
pilus assembly protein
compare
PS417
_02820
-1.3
-1.5
urea ABC transporter ATP-binding protein
compare
PS417
_26890
-1.3
-5.2
dihydroxy-acid dehydratase
compare
PS417
_27835
-1.3
-4.0
endoribonuclease
compare
PS417
_01850
-1.3
-2.5
phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)
(from data)
compare
PS417
_07710
-1.3
-5.0
membrane protein
compare
PS417
_01635
-1.2
-4.9
nitrogen regulation protein NR(I)
compare
PS417
_26745
-1.2
-3.8
methionine biosynthesis protein MetW
compare
PS417
_22360
-1.2
-4.4
Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2)
(from data)
compare
PS417
_08125
-1.2
-0.5
prephenate dehydratase
compare
PS417
_04390
-1.2
-2.1
toluene tolerance protein
compare
PS417
_08245
-1.2
-1.0
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase
compare
PS417
_00385
-1.2
-1.1
Fur family transcriptional regulator
compare
PS417
_04385
-1.2
-2.4
organic solvent ABC transporter substrate-binding protein
compare
PS417
_02255
-1.2
-2.3
lipopolysaccharide kinase
compare
PS417
_13165
-1.2
-2.2
peroxidase
compare
PS417
_06200
-1.1
-4.3
protein-PII uridylyltransferase
compare
PS417
_05595
-1.1
-5.9
ornithine carbamoyltransferase
compare
PS417
_24560
-1.1
-1.9
ferrous iron transporter
compare
PS417
_26990
-1.1
-0.7
RNA pyrophosphohydrolase
compare
PS417
_14940
-1.1
-1.6
LysR family transcriptional regulator
compare
PS417
_01920
-1.1
-1.0
ATP-dependent protease subunit HslV
compare
PS417
_13205
-1.1
-1.5
isochorismate-pyruvate lyase
compare
PS417
_01640
-1.1
-2.2
histidine kinase
compare
PS417
_19650
-1.1
-3.0
chemotaxis protein CheW
compare
PS417
_22355
-1.1
-3.7
glycine cleavage system protein H
compare
PS417
_08410
-1.1
-2.2
hypothetical protein
compare
PS417
_18595
-1.1
-3.5
3-isopropylmalate dehydratase
compare
PS417
_16490
-1.1
-1.4
cell division protein FtsK
compare
PS417
_24705
-1.1
-2.1
D-alanyl-D-alanine carboxypeptidase
compare
PS417
_26335
-1.1
-2.3
BetI family transcriptional regulator
compare
PS417
_04365
-1.1
-1.0
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
compare
PS417
_18530
-1.1
-3.0
O-succinylhomoserine sulfhydrylase
compare
PS417
_21565
-1.0
-3.5
flagellar basal body rod protein FlgC
compare
PS417
_19830
-1.0
-4.0
flagellar assembly protein FliT
compare
PS417
_15875
-1.0
-1.6
LuxR family transcriptional regulator
compare
PS417
_19870
-1.0
-3.6
flagellar rod assembly protein FlgJ
compare
PS417
_19705
-1.0
-1.5
flagellar biosynthesis regulator FlhF
compare
PS417
_21480
-1.0
-0.8
23S rRNA pseudouridylate synthase
compare
PS417
_01855
-1.0
-2.1
phosphoribosyl-AMP cyclohydrolase
compare
PS417
_23765
-1.0
-1.8
hypothetical protein
compare
PS417
_06205
-1.0
-5.7
methionine aminopeptidase
compare
PS417
_04530
-1.0
-1.6
glycerate dehydrogenase
compare
PS417
_04410
-1.0
-1.2
hypothetical protein
compare
PS417
_24500
-1.0
-2.5
DEAD/DEAH box helicase
compare
PS417
_01620
-1.0
-1.5
preprotein translocase subunit SecB
compare
PS417
_26370
-1.0
-1.9
RNA helicase
compare
PS417
_19190
-1.0
-2.1
BolA family transcriptional regulator
compare
PS417
_27245
-1.0
-2.7
aminotransferase DegT
compare
PS417
_15110
-1.0
-3.3
protein BatD
compare
PS417
_01955
-1.0
-4.3
peptidase
compare
PS417
_04585
-1.0
-1.3
hypothetical protein
compare
PS417
_08540
-1.0
-2.0
RNA helicase
compare
PS417
_15135
-1.0
-1.1
hypothetical protein
compare
PS417
_22300
-1.0
-1.2
LTXXQ domain protein
compare
PS417
_27875
-1.0
-4.0
histidine kinase
compare
PS417
_06150
-0.9
-1.7
SAM-dependent methlyltransferase
compare
PS417
_22370
-0.9
-3.5
Aminomethyltransferase (EC 2.1.2.10)
(from data)
compare
PS417
_21705
-0.9
-3.6
arginine N-succinyltransferase
compare
PS417
_03260
-0.9
-1.2
5S ribosomal RNA
compare
PS417
_02510
-0.9
-2.1
ATP phosphoribosyltransferase regulatory subunit
compare
PS417
_28075
-0.9
-3.8
phosphate ABC transporter permease
compare
PS417
_15780
-0.9
-2.7
membrane protein
compare
PS417
_23900
-0.9
-4.7
poly(A) polymerase
compare
PS417
_18600
-0.9
-1.3
isopropylmalate isomerase
compare
PS417
_16990
-0.9
-4.3
acyl-CoA dehydrogenase
compare
PS417
_19850
-0.9
-4.9
branched-chain alpha-keto acid dehydrogenase subunit E2
compare
PS417
_15090
-0.9
-1.6
hypothetical protein
compare
PS417
_16720
-0.9
-1.1
membrane protein
compare
PS417
_12290
-0.9
-3.9
sulfite reductase
compare
PS417
_19095
-0.9
-1.5
hypothetical protein
compare
PS417
_21430
-0.9
-1.5
3-oxoacyl-ACP synthase
compare
PS417
_16695
-0.9
-1.7
hypothetical protein
compare
PS417
_00220
-0.9
-1.4
hypothetical protein
compare
PS417
_27040
-0.9
-1.3
3-phosphoglycerate dehydrogenase
compare
PS417
_24125
-0.9
-2.1
hypothetical protein
compare
PS417
_06245
-0.9
-1.1
zinc metallopeptidase RseP
compare
PS417
_19860
-0.9
-5.7
flagellar hook protein FlgL
compare
PS417
_28085
-0.9
-5.5
phosphate-binding protein
compare
PS417
_22895
-0.9
-3.3
tyrosine recombinase XerD
compare
PS417
_14425
-0.8
-2.4
alkylhydroperoxidase
compare
PS417
_19840
-0.8
-5.1
flagellar cap protein FliD
compare
PS417
_15465
-0.8
-2.0
carboxynorspermidine decarboxylase
compare
PS417
_21035
-0.8
-4.2
multidrug transporter
compare
PS417
_16045
-0.8
-0.9
acyl-CoA dehydrogenase
compare
PS417
_02365
-0.8
-1.3
hypothetical protein
compare
PS417
_07615
-0.8
-3.2
TetR family transcriptional regulator
compare
PS417
_25715
-0.8
-2.7
anthranilate phosphoribosyltransferase
compare
PS417
_19730
-0.8
-1.7
flagellar biosynthesis protein FliR
compare
PS417
_19865
-0.8
-5.5
flagellar hook protein FlgK
compare
PS417
_22445
-0.8
-0.9
ATP-dependent DNA helicase RuvB
compare
PS417
_03560
-0.8
-1.1
GTP-binding protein
compare
PS417
_19785
-0.8
-2.8
flagellar biogenesis protein
compare
PS417
_22350
-0.8
-1.4
Fis family transcriptional regulator
compare
PS417
_19765
-0.8
-4.1
flagellar hook-length control protein
compare
PS417
_06685
-0.8
-0.7
beta-ketoadipyl CoA thiolase
compare
PS417
_09725
-0.8
-3.5
transporter
compare
PS417
_26740
-0.8
-4.4
homoserine acetyltransferase
compare
PS417
_02160
-0.8
-1.0
hypothetical protein
compare
PS417
_16520
-0.8
-1.1
cold-shock protein
compare
PS417
_21630
-0.8
-1.7
magnesium transporter
compare
PS417
_26390
-0.8
-0.9
acyltransferase
compare
PS417
_25650
-0.8
-3.4
anhydro-N-acetylmuramic acid kinase
compare
PS417
_20855
-0.8
-0.9
hypothetical protein
compare
PS417
_11475
-0.8
-1.7
membrane protein
compare
PS417
_08365
-0.8
-0.8
hypothetical protein
compare
PS417
_20340
-0.8
-1.3
hypothetical protein
compare
PS417
_03525
-0.8
-1.2
hypothetical protein
compare
PS417
_12805
-0.8
-4.6
glycogen branching protein
compare
PS417
_10095
-0.7
-1.4
hypothetical protein
compare
PS417
_01560
-0.7
-1.2
imidazoleglycerol-phosphate dehydratase
compare
PS417
_07575
-0.7
-1.9
multifunctional fatty acid oxidation complex subunit alpha
compare
PS417
_19665
-0.7
-2.7
flagellar motor protein MotD
compare
PS417
_15665
-0.7
-1.3
hypothetical protein
compare
PS417
_16535
-0.7
-1.9
NUDIX hydrolase
compare
PS417
_23950
-0.7
-1.2
polynucleotide phosphorylase/polyadenylase
compare
PS417
_14045
-0.7
-1.6
alkyl hydroperoxide reductase
compare
PS417
_02980
-0.7
-0.7
chemotaxis protein
compare
PS417
_16465
-0.7
-3.7
sirohydrochlorin ferrochelatase
compare
PS417
_00180
-0.7
-0.9
tryptophan synthase subunit alpha
compare
PS417
_01340
-0.7
-2.9
agmatine deiminase
compare
PS417
_27505
-0.7
-2.4
transcriptional regulator
compare
PS417
_20635
-0.7
-0.7
ABC transporter ATP-binding protein
compare
PS417
_27010
-0.7
-4.3
threonine dehydratase
compare
PS417
_05065
-0.7
-1.3
hypothetical protein
compare
PS417
_26155
-0.7
-1.4
hypothetical protein
compare
PS417
_08545
-0.7
-1.3
aromatic ring-opening dioxygenase LigB
compare
PS417
_19655
-0.7
-1.7
chemotaxis protein CheW
compare
PS417
_27615
-0.7
-3.0
ammonia channel protein
compare
PS417
_21830
-0.7
-2.0
TetR family transcriptional regulator
compare
Specific Phenotypes
For 2 genes in this experiment