Experiment set19IT030 for Pseudomonas simiae WCS417

Compare to:

Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_01635 -9.1 -5.1 nitrogen regulation protein NR(I) compare
PS417_18600 -8.2 -3.5 isopropylmalate isomerase compare
PS417_18540 -8.2 -4.5 colicin V production CvpA compare
PS417_23805 -7.6 -4.8 acetolactate synthase 3 regulatory subunit compare
PS417_26740 -7.2 -8.6 homoserine acetyltransferase compare
PS417_18585 -7.0 -4.8 3-isopropylmalate dehydrogenase compare
PS417_25720 -6.9 -8.6 anthranilate synthase component II compare
PS417_01855 -6.8 -2.8 phosphoribosyl-AMP cyclohydrolase compare
PS417_23950 -6.7 -2.8 polynucleotide phosphorylase/polyadenylase compare
PS417_04420 -6.7 -10.3 histidinol dehydrogenase compare
PS417_23800 -6.4 -11.5 ketol-acid reductoisomerase compare
PS417_00185 -6.3 -4.1 tryptophan synthase subunit beta compare
PS417_19675 -6.0 -5.0 chemotaxis protein CheY compare
PS417_05635 -6.0 -8.9 membrane protein compare
PS417_01640 -5.9 -5.4 histidine kinase compare
PS417_02005 -5.8 -11.5 glutamate synthase compare
PS417_23545 -5.8 -2.8 gamma-glutamyl kinase compare
PS417_06200 -5.8 -6.9 protein-PII uridylyltransferase compare
PS417_19650 -5.7 -4.6 chemotaxis protein CheW compare
PS417_19690 -5.7 -7.2 histidine kinase compare
PS417_18595 -5.7 -3.4 3-isopropylmalate dehydratase compare
PS417_19660 -5.6 -7.7 cobalamin biosynthesis protein CobQ compare
PS417_08230 -5.6 -2.4 lipopolysaccharide biosynthesis protein RfbH compare
PS417_22350 -5.6 -2.0 Fis family transcriptional regulator compare
PS417_01955 -5.5 -9.9 peptidase compare
PS417_26745 -5.4 -6.6 methionine biosynthesis protein MetW compare
PS417_19850 -5.4 -13.3 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_04415 -5.3 -7.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_22445 -5.3 -3.0 ATP-dependent DNA helicase RuvB compare
PS417_12855 -5.3 -5.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_25725 -5.3 -10.3 anthranilate synthase component I compare
PS417_21570 -5.2 -6.0 flagellar basal body rod protein FlgB compare
PS417_21595 -5.2 -6.0 flagellar biosynthesis protein FlgN compare
PS417_19655 -5.1 -5.1 chemotaxis protein CheW compare
PS417_19860 -5.1 -17.6 flagellar hook protein FlgL compare
PS417_08245 -5.0 -1.3 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_01850 -5.0 -3.8 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_21565 -5.0 -4.5 flagellar basal body rod protein FlgC compare
PS417_23810 -4.9 -9.1 acetolactate synthase 3 catalytic subunit compare
PS417_18560 -4.9 -5.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_22565 -4.8 -1.2 formyltetrahydrofolate deformylase compare
PS417_27835 -4.8 -9.3 endoribonuclease compare
PS417_02000 -4.8 -13.0 glutamate synthase compare
PS417_24745 -4.8 -2.5 gamma-glutamyl phosphate reductase compare
PS417_19790 -4.7 -4.0 ATP synthase compare
PS417_12310 -4.7 -7.2 methionine synthase compare
PS417_19835 -4.7 -1.6 flagellar biosynthesis protein FliS compare
PS417_19765 -4.7 -8.2 flagellar hook-length control protein compare
PS417_19800 -4.7 -2.5 flagellar motor switch protein FliG compare
PS417_18310 -4.7 -1.9 hypothetical protein compare
PS417_18530 -4.7 -5.3 O-succinylhomoserine sulfhydrylase compare
PS417_21390 -4.6 -5.0 hypothetical protein compare
PS417_05975 -4.6 -1.2 chemotaxis protein CheW compare
PS417_08220 -4.5 -1.1 epimerase compare
PS417_22355 -4.5 -3.8 glycine cleavage system protein H compare
PS417_19880 -4.4 -8.8 flagellar basal body L-ring protein compare
PS417_27795 -4.4 -1.1 orotate phosphoribosyltransferase compare
PS417_20105 -4.4 -20.2 glycosyl transferase compare
PS417_22360 -4.3 -6.6 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) compare
PS417_21555 -4.3 -12.6 flagellar hook protein FlgE compare
PS417_25710 -4.3 -1.5 indole-3-glycerol-phosphate synthase compare
PS417_01575 -4.3 -4.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_19705 -4.2 -2.7 flagellar biosynthesis regulator FlhF compare
PS417_23995 -4.2 -1.0 preprotein translocase subunit SecG compare
PS417_05595 -4.2 -7.0 ornithine carbamoyltransferase compare
PS417_12290 -4.2 -8.8 sulfite reductase compare
PS417_19740 -4.2 -4.8 flagellar biosynthesis protein flip compare
PS417_19745 -4.2 -7.6 flagellar assembly protein FliO compare
PS417_23775 -4.1 -2.3 exodeoxyribonuclease V subunit beta compare
PS417_01565 -4.1 -3.6 imidazole glycerol phosphate synthase compare
PS417_21585 -4.1 -11.3 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_28220 -4.1 -2.4 LysR family transcriptional regulator compare
PS417_23110 -4.1 -7.6 2-isopropylmalate synthase compare
PS417_19665 -4.1 -3.3 flagellar motor protein MotD compare
PS417_26995 -4.1 -9.5 phosphoserine phosphatase compare
PS417_06375 -4.0 -1.0 deoxycytidine triphosphate deaminase compare
PS417_00180 -4.0 -2.1 tryptophan synthase subunit alpha compare
PS417_19795 -3.9 -12.9 flagellar assembly protein FliH compare
PS417_01580 -3.9 -1.3 imidazole glycerol phosphate synthase compare
PS417_19710 -3.9 -17.2 flagellar biosynthesis protein FlhA compare
PS417_21125 -3.8 -6.2 phosphoadenosine phosphosulfate reductase compare
PS417_02510 -3.8 -3.6 ATP phosphoribosyltransferase regulatory subunit compare
PS417_27870 -3.7 -4.1 ATP-dependent DNA helicase RecG compare
PS417_19865 -3.7 -8.6 flagellar hook protein FlgK compare
PS417_27195 -3.7 -1.3 N-acetylglutamate synthase compare
PS417_19825 -3.7 -10.6 ATPase AAA compare
PS417_19695 -3.7 -8.3 flagellar biosynthesis sigma factor compare
PS417_19785 -3.7 -3.5 flagellar biogenesis protein compare
PS417_21320 -3.6 -5.2 transcriptional regulator compare
PS417_06245 -3.6 -2.4 zinc metallopeptidase RseP compare
PS417_19885 -3.6 -2.2 flagellar basal body rod protein FlgG compare
PS417_19840 -3.5 -10.0 flagellar cap protein FliD compare
PS417_22450 -3.5 -1.5 ATP-dependent DNA helicase RuvA compare
PS417_27305 -3.5 -9.2 5-formyltetrahydrofolate cyclo-ligase compare
PS417_02210 -3.4 -6.0 diguanylate cyclase compare
PS417_08200 -3.4 -4.1 hypothetical protein compare
PS417_19730 -3.3 -4.3 flagellar biosynthesis protein FliR compare
PS417_19805 -3.3 -4.9 flagellar M-ring protein FliF compare
PS417_19870 -3.3 -3.5 flagellar rod assembly protein FlgJ compare
PS417_21575 -3.2 -3.5 chemotaxis protein compare
PS417_18690 -3.2 -4.3 aromatic amino acid aminotransferase compare
PS417_15135 -3.1 -1.3 hypothetical protein compare
PS417_27435 -3.1 -6.3 polyphosphate kinase compare
PS417_08205 -3.1 -3.2 acetyltransferase compare
PS417_25715 -3.1 -4.8 anthranilate phosphoribosyltransferase compare
PS417_03165 -3.1 -3.5 hypothetical protein compare
PS417_19735 -3.0 -5.7 flagellar biosynthesis protein FliQ compare
PS417_01570 -3.0 -1.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_08135 -3.0 -4.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_27865 -3.0 -2.4 LysR family transcriptional regulator compare
PS417_19755 -2.9 -2.1 flagellar motor switch protein FliM compare
PS417_19830 -2.9 -3.2 flagellar assembly protein FliT compare
PS417_23770 -2.8 -1.5 exodeoxyribonuclease V subunit alpha compare
PS417_08125 -2.7 -0.7 prephenate dehydratase compare
PS417_20160 -2.7 -3.1 cysteine synthase compare
PS417_19725 -2.7 -4.3 flagellar biosynthesis protein FlhB compare
PS417_22990 -2.7 -1.8 iron dicitrate transport regulator FecR compare
PS417_02555 -2.7 -10.8 exoribonuclease R compare
PS417_26890 -2.7 -3.5 dihydroxy-acid dehydratase compare
PS417_08195 -2.7 -7.3 hypothetical protein compare
PS417_05580 -2.7 -6.9 glycerol uptake facilitator GlpF compare
PS417_05985 -2.6 -3.0 chemotaxis protein CheY compare
PS417_20095 -2.6 -8.3 hypothetical protein compare
PS417_27615 -2.6 -6.7 ammonia channel protein compare
PS417_05575 -2.6 -7.2 Glycerol kinase (EC 2.7.1.30) (from data) compare
PS417_19350 -2.6 -3.2 GTP cyclohydrolase compare
PS417_26990 -2.6 -0.9 RNA pyrophosphohydrolase compare
PS417_02560 -2.6 -1.8 23S rRNA methyltransferase compare
PS417_14065 -2.5 -5.6 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_14940 -2.5 -1.8 LysR family transcriptional regulator compare
PS417_20985 -2.5 -2.4 porin compare
PS417_19645 -2.5 -3.1 chemotaxis protein compare
PS417_13510 -2.5 -1.1 polyketide cyclase compare
PS417_00160 -2.5 -4.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
PS417_01560 -2.5 -2.2 imidazoleglycerol-phosphate dehydratase compare
PS417_18570 -2.5 -4.4 peptidoglycan-binding protein compare
PS417_09085 -2.5 -1.4 hypothetical protein compare
PS417_26605 -2.4 -1.2 malonate decarboxylase subunit beta compare
PS417_20610 -2.4 -1.6 hypothetical protein compare
PS417_17945 -2.4 -1.0 hypothetical protein compare
PS417_19605 -2.4 -1.4 hypothetical protein compare
PS417_27010 -2.3 -6.4 threonine dehydratase compare
PS417_20650 -2.3 -8.2 hypothetical protein compare
PS417_06895 -2.3 -3.1 DNA-binding protein compare
PS417_23900 -2.3 -10.3 poly(A) polymerase compare
PS417_27800 -2.3 -3.2 exodeoxyribonuclease III compare
PS417_00045 -2.2 -1.9 glycerol acyltransferase compare
PS417_26985 -2.2 -3.3 phosphoenolpyruvate-protein phosphotransferase compare
PS417_08155 -2.2 -1.5 integration host factor subunit beta compare
PS417_02440 -2.2 -3.3 flagellar motor protein MotB compare
PS417_01915 -2.2 -0.8 ATP-dependent protease ATP-binding subunit HslU compare
PS417_27245 -2.2 -3.1 aminotransferase DegT compare
PS417_19625 -2.2 -3.9 histidine kinase compare
PS417_28070 -2.2 -8.3 phosphate ABC transporter ATP-binding protein compare
PS417_08225 -2.1 -2.7 acetolactate synthase compare
PS417_08185 -2.1 -3.4 glycosyl transferase compare
PS417_21705 -2.1 -3.3 arginine N-succinyltransferase compare
PS417_27585 -2.1 -2.0 diaminopimelate epimerase compare
PS417_22370 -2.1 -2.8 Aminomethyltransferase (EC 2.1.2.10) (from data) compare
PS417_20665 -2.1 -5.2 hypothetical protein compare
PS417_20690 -2.1 -5.5 chemotaxis protein compare
PS417_06530 -2.0 -2.2 membrane protein compare
PS417_03465 -2.0 -0.9 type III secretion protein compare
PS417_19630 -1.9 -2.3 LuxR family transcriptional regulator compare
PS417_05100 -1.9 -1.8 RNA polymerase sigma factor compare
PS417_19820 -1.9 -2.8 histidine kinase compare
PS417_22690 -1.9 -2.8 phosphogluconate dehydratase compare
PS417_07170 -1.9 -2.3 hypothetical protein compare
PS417_20090 -1.9 -5.8 DegT/DnrJ/EryC1/StrS aminotransferase compare
PS417_08540 -1.9 -2.1 RNA helicase compare
PS417_20635 -1.9 -0.9 ABC transporter ATP-binding protein compare
PS417_18590 -1.9 -2.2 SAM-dependent methyltransferase compare
PS417_00370 -1.9 -1.0 hypothetical protein compare
PS417_21625 -1.9 -1.0 DNA-binding protein compare
PS417_14045 -1.9 -3.0 alkyl hydroperoxide reductase compare
PS417_04650 -1.9 -0.9 D-alanine--D-alanine ligase compare
PS417_16465 -1.8 -4.1 sirohydrochlorin ferrochelatase compare
PS417_22520 -1.8 -1.8 histidine kinase compare
PS417_10720 -1.8 -7.3 chemotaxis protein CheY compare
PS417_21510 -1.8 -1.5 histidine kinase compare
PS417_16990 -1.8 -5.4 acyl-CoA dehydrogenase compare
PS417_27300 -1.8 -0.8 cell division protein ZapA compare
PS417_02225 -1.8 -2.3 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_24710 -1.8 -5.3 lipoprotein compare
PS417_19615 -1.8 -6.0 chemotaxis protein CheW compare
PS417_05160 -1.8 -0.9 DNA polymerase III subunit chi compare
PS417_15495 -1.7 -1.3 FAD-dependent oxidoreductase compare
PS417_08190 -1.7 -8.2 membrane protein compare
PS417_27690 -1.7 -4.0 XRE family transcriptional regulator compare
PS417_15105 -1.7 -4.3 membrane protein compare
PS417_16160 -1.7 -2.8 ABC transporter substrate-binding protein compare
PS417_22795 -1.7 -1.4 exclusion suppressor FxsA compare
PS417_05535 -1.7 -1.4 Fis family transcriptional regulator compare
PS417_00705 -1.7 -1.5 MarR family transcriptional regulator compare
PS417_23380 -1.7 -2.2 cytochrome o ubiquinol oxidase subunit III compare
PS417_01710 -1.7 -4.4 histidine utilization repressor compare
PS417_19685 -1.7 -5.4 protein phosphatase compare
PS417_01995 -1.7 -1.4 hypothetical protein compare
PS417_08580 -1.7 -3.6 histidine kinase compare
PS417_28080 -1.7 -8.9 phosphate ABC transporter permease compare


Specific Phenotypes

For 5 genes in this experiment