Experiment set19IT027 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic acid monopotassium salt monohydrate; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_19835 -4.8 -2.0 flagellar biosynthesis protein FliS compare
PS417_00185 -4.2 -5.1 tryptophan synthase subunit beta compare
PS417_05535 -4.0 -1.8 Fis family transcriptional regulator compare
PS417_04380 -3.9 -2.0 ABC transporter permease compare
PS417_21430 -3.1 -2.8 3-oxoacyl-ACP synthase compare
PS417_24745 -3.0 -4.8 gamma-glutamyl phosphate reductase compare
PS417_02415 -3.0 -5.0 phosphoserine phosphatase compare
PS417_23770 -2.9 -1.8 exodeoxyribonuclease V subunit alpha compare
PS417_27865 -2.9 -3.8 LysR family transcriptional regulator compare
PS417_20855 -2.9 -1.7 hypothetical protein compare
PS417_27040 -2.7 -3.2 3-phosphoglycerate dehydrogenase compare
PS417_06680 -2.6 -9.0 nuclease PIN compare
PS417_08135 -2.5 -4.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_21575 -2.5 -5.8 chemotaxis protein compare
PS417_01915 -2.5 -1.0 ATP-dependent protease ATP-binding subunit HslU compare
PS417_19795 -2.4 -12.7 flagellar assembly protein FliH compare
PS417_00385 -2.4 -1.4 Fur family transcriptional regulator compare
PS417_21585 -2.3 -9.3 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_22570 -2.3 -1.2 H-NS histone compare
PS417_19865 -2.3 -13.0 flagellar hook protein FlgK compare
PS417_19650 -2.3 -5.5 chemotaxis protein CheW compare
PS417_19885 -2.3 -4.4 flagellar basal body rod protein FlgG compare
PS417_21565 -2.2 -6.8 flagellar basal body rod protein FlgC compare
PS417_19850 -2.2 -8.7 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_04585 -2.2 -2.2 hypothetical protein compare
PS417_01580 -2.2 -2.0 imidazole glycerol phosphate synthase compare
PS417_23810 -2.2 -7.7 acetolactate synthase 3 catalytic subunit compare
PS417_27800 -2.2 -3.3 exodeoxyribonuclease III compare
PS417_19860 -2.1 -13.5 flagellar hook protein FlgL compare
PS417_03260 -2.0 -1.7 5S ribosomal RNA compare
PS417_19840 -2.0 -9.2 flagellar cap protein FliD compare
PS417_20985 -2.0 -2.5 porin compare
PS417_21630 -2.0 -3.2 magnesium transporter compare
PS417_24585 -2.0 -8.5 AMP nucleosidase compare
PS417_02975 -1.9 -4.1 3-dehydroquinate dehydratase compare
PS417_19880 -1.9 -6.2 flagellar basal body L-ring protein compare
PS417_21595 -1.9 -4.8 flagellar biosynthesis protein FlgN compare
PS417_21570 -1.9 -4.0 flagellar basal body rod protein FlgB compare
PS417_02000 -1.9 -9.1 glutamate synthase compare
PS417_19740 -1.9 -10.0 flagellar biosynthesis protein flip compare
PS417_00180 -1.9 -2.5 tryptophan synthase subunit alpha compare
PS417_16510 -1.9 -3.0 Clp protease ClpX compare
PS417_19785 -1.9 -4.5 flagellar biogenesis protein compare
PS417_18595 -1.9 -3.3 3-isopropylmalate dehydratase compare
PS417_19790 -1.9 -2.9 ATP synthase compare
PS417_24155 -1.9 -1.8 ATP-binding protein compare
PS417_27425 -1.9 -6.0 exopolyphosphatase compare
PS417_19695 -1.8 -10.0 flagellar biosynthesis sigma factor compare
PS417_19955 -1.8 -2.1 hypothetical protein compare
PS417_19710 -1.8 -11.1 flagellar biosynthesis protein FlhA compare
PS417_18025 -1.8 -3.0 cytochrome C compare
PS417_19745 -1.8 -8.2 flagellar assembly protein FliO compare
PS417_21555 -1.7 -8.7 flagellar hook protein FlgE compare
PS417_13990 -1.7 -2.2 LysR family transcriptional regulator compare
PS417_25715 -1.7 -4.8 anthranilate phosphoribosyltransferase compare
PS417_02005 -1.7 -8.1 glutamate synthase compare
PS417_19660 -1.7 -5.1 cobalamin biosynthesis protein CobQ compare
PS417_09085 -1.7 -1.5 hypothetical protein compare
PS417_19755 -1.7 -2.3 flagellar motor switch protein FliM compare
PS417_19805 -1.6 -4.9 flagellar M-ring protein FliF compare
PS417_26985 -1.6 -5.8 phosphoenolpyruvate-protein phosphotransferase compare
PS417_19765 -1.6 -7.0 flagellar hook-length control protein compare
PS417_16555 -1.6 -1.9 cupin compare
PS417_18310 -1.6 -1.6 hypothetical protein compare
PS417_21510 -1.6 -1.5 histidine kinase compare
PS417_22210 -1.6 -2.4 AraC family transcriptional regulator compare
PS417_19690 -1.5 -2.0 histidine kinase compare
PS417_27795 -1.5 -0.9 orotate phosphoribosyltransferase compare
PS417_19725 -1.5 -5.0 flagellar biosynthesis protein FlhB compare
PS417_19730 -1.5 -3.8 flagellar biosynthesis protein FliR compare
PS417_05635 -1.5 -7.2 membrane protein compare
PS417_08540 -1.5 -2.4 RNA helicase compare
PS417_23805 -1.5 -3.3 acetolactate synthase 3 regulatory subunit compare
PS417_18560 -1.5 -4.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_19350 -1.5 -3.4 GTP cyclohydrolase compare
PS417_18585 -1.5 -3.9 3-isopropylmalate dehydrogenase compare
PS417_19825 -1.5 -8.1 ATPase AAA compare
PS417_26605 -1.5 -1.1 malonate decarboxylase subunit beta compare
PS417_19735 -1.5 -5.4 flagellar biosynthesis protein FliQ compare
PS417_02555 -1.4 -8.6 exoribonuclease R compare
PS417_23775 -1.4 -2.2 exodeoxyribonuclease V subunit beta compare
PS417_01565 -1.4 -4.1 imidazole glycerol phosphate synthase compare
PS417_18600 -1.4 -1.8 isopropylmalate isomerase compare
PS417_24705 -1.4 -2.5 D-alanyl-D-alanine carboxypeptidase compare
PS417_07710 -1.4 -3.9 membrane protein compare
PS417_25725 -1.4 -8.8 anthranilate synthase component I compare
PS417_02485 -1.4 -4.0 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_23380 -1.4 -2.1 cytochrome o ubiquinol oxidase subunit III compare
PS417_10095 -1.4 -1.2 hypothetical protein compare
PS417_04595 -1.4 -2.2 cell division protein MraZ compare
PS417_19675 -1.4 -4.4 chemotaxis protein CheY compare
PS417_04385 -1.3 -3.2 organic solvent ABC transporter substrate-binding protein compare
PS417_22445 -1.3 -2.3 ATP-dependent DNA helicase RuvB compare
PS417_09235 -1.3 -1.1 molecular chaperone compare
PS417_15135 -1.3 -1.6 hypothetical protein compare
PS417_27585 -1.3 -2.0 diaminopimelate epimerase compare
PS417_03560 -1.3 -1.4 GTP-binding protein compare
PS417_26990 -1.3 -0.9 RNA pyrophosphohydrolase compare
PS417_25720 -1.3 -3.6 anthranilate synthase component II compare
PS417_04835 -1.3 -1.2 hemolysin D compare
PS417_27870 -1.3 -2.0 ATP-dependent DNA helicase RecG compare
PS417_02280 -1.3 -1.5 GlcNAc-PI de-N-acetylase compare
PS417_27245 -1.3 -3.1 aminotransferase DegT compare
PS417_07640 -1.2 -2.9 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_00650 -1.2 -0.8 LysR family transcriptional regulator compare
PS417_26335 -1.2 -1.9 BetI family transcriptional regulator compare
PS417_02510 -1.2 -2.5 ATP phosphoribosyltransferase regulatory subunit compare
PS417_23545 -1.2 -2.1 gamma-glutamyl kinase compare
PS417_18055 -1.2 -1.4 general secretion pathway protein GspK compare
PS417_17035 -1.2 -1.2 Cro/Cl family transcriptional regulator compare
PS417_21000 -1.2 -1.3 CrfX protein compare
PS417_06635 -1.2 -1.3 ferredoxin compare
PS417_09470 -1.2 -1.1 hypothetical protein compare
PS417_07565 -1.2 -2.3 hypothetical protein compare
PS417_15495 -1.2 -1.8 FAD-dependent oxidoreductase compare
PS417_20635 -1.2 -0.9 ABC transporter ATP-binding protein compare
PS417_21560 -1.2 -3.5 flagellar basal body rod modification protein FlgD compare
PS417_27300 -1.2 -0.8 cell division protein ZapA compare
PS417_04415 -1.2 -5.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_04365 -1.2 -1.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_01630 -1.2 -1.6 hypothetical protein compare
PS417_00535 -1.2 -1.5 Holliday junction resolvase compare
PS417_19655 -1.2 -2.4 chemotaxis protein CheW compare
PS417_15820 -1.2 -1.7 universal stress protein UspA compare
PS417_27945 -1.2 -1.6 type VI secretion protein ImpA compare
PS417_16195 -1.2 -1.0 AraC family transcriptional regulator compare
PS417_05560 -1.1 -2.0 ABC transporter compare
PS417_20705 -1.1 -2.6 cbb3-type cytochrome c oxidase subunit II compare
PS417_23025 -1.1 -4.2 murein transglycosylase compare
PS417_19800 -1.1 -2.8 flagellar motor switch protein FliG compare
PS417_20785 -1.1 -2.2 transcriptional regulator compare
PS417_26745 -1.1 -3.2 methionine biosynthesis protein MetW compare
PS417_13800 -1.1 -2.2 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_06375 -1.1 -0.6 deoxycytidine triphosphate deaminase compare
PS417_15105 -1.1 -4.0 membrane protein compare
PS417_18530 -1.1 -3.2 O-succinylhomoserine sulfhydrylase compare
PS417_26390 -1.1 -1.5 acyltransferase compare
PS417_17375 -1.1 -1.9 C4-dicarboxylate ABC transporter compare
PS417_27195 -1.1 -1.1 N-acetylglutamate synthase compare
PS417_12855 -1.1 -2.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_21655 -1.0 -1.0 aspartate kinase compare
PS417_15285 -1.0 -0.9 type VI secretion protein compare
PS417_01955 -1.0 -5.3 peptidase compare
PS417_04390 -1.0 -2.3 toluene tolerance protein compare
PS417_12290 -1.0 -3.4 sulfite reductase compare
PS417_19870 -1.0 -1.5 flagellar rod assembly protein FlgJ compare
PS417_01635 -1.0 -3.9 nitrogen regulation protein NR(I) compare
PS417_25710 -1.0 -0.9 indole-3-glycerol-phosphate synthase compare
PS417_19830 -1.0 -3.2 flagellar assembly protein FliT compare
PS417_27305 -1.0 -5.4 5-formyltetrahydrofolate cyclo-ligase compare
PS417_23800 -1.0 -4.8 ketol-acid reductoisomerase compare
PS417_28450 -1.0 -1.5 XRE family transcriptional regulator compare
PS417_14540 -1.0 -1.1 cytochrome C oxidase subunit III compare
PS417_08130 -1.0 -1.7 aspartate aminotransferase compare
PS417_01575 -1.0 -1.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_23375 -1.0 -1.4 cytochrome C oxidase compare
PS417_09865 -1.0 -1.4 hypothetical protein compare
PS417_05815 -1.0 -2.6 recombinase RecA compare
PS417_22990 -1.0 -1.0 iron dicitrate transport regulator FecR compare
PS417_19705 -1.0 -1.8 flagellar biosynthesis regulator FlhF compare
PS417_21035 -1.0 -5.4 multidrug transporter compare
PS417_26890 -1.0 -3.0 dihydroxy-acid dehydratase compare
PS417_06945 -1.0 -0.9 membrane protein compare
PS417_03100 -1.0 -0.6 pilus assembly protein compare
PS417_09150 -1.0 -1.9 energy transducer TonB compare
PS417_06205 -0.9 -5.2 methionine aminopeptidase compare
PS417_12035 -0.9 -1.9 dihydroxyacetone kinase compare
PS417_09450 -0.9 -3.6 Fis family transcriptional regulator compare
PS417_13790 -0.9 -2.4 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
PS417_03045 -0.9 -1.3 hypothetical protein compare
PS417_20340 -0.9 -1.6 hypothetical protein compare
PS417_15225 -0.9 -2.6 alpha/beta hydrolase compare
PS417_26060 -0.9 -1.7 DNA polymerase III subunit epsilon compare
PS417_26370 -0.9 -2.4 RNA helicase compare
PS417_15095 -0.9 -1.8 hypothetical protein compare
PS417_06895 -0.9 -2.1 DNA-binding protein compare
PS417_14165 -0.9 -1.5 ArsR family transcriptional regulator compare
PS417_03780 -0.9 -2.3 general secretion pathway protein GspH compare
PS417_12805 -0.9 -4.7 glycogen branching protein compare
PS417_15110 -0.9 -2.3 protein BatD compare
PS417_06780 -0.9 -2.1 TetR family transcriptional regulator compare
PS417_04420 -0.9 -5.0 histidinol dehydrogenase compare
PS417_06365 -0.9 -4.0 RNA polymerase sigma factor compare
PS417_26365 -0.9 -1.1 EmrB/QacA subfamily drug resistance transporter compare
PS417_21120 -0.9 -1.7 phosphoserine phosphatase compare
PS417_01850 -0.9 -2.4 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_01620 -0.9 -1.2 preprotein translocase subunit SecB compare
PS417_16775 -0.9 -2.9 branched-chain amino acid ABC transporter ATP-binding protein compare
PS417_17305 -0.8 -1.1 hypothetical protein compare
PS417_06370 -0.8 -1.1 cold-shock protein compare
PS417_04305 -0.8 -1.0 aspartate ammonia-lyase compare
PS417_08170 -0.8 -5.0 capsular biosynthesis protein compare
PS417_19665 -0.8 -1.9 flagellar motor protein MotD compare
PS417_16465 -0.8 -4.4 sirohydrochlorin ferrochelatase compare
PS417_17215 -0.8 -1.4 peptidylprolyl isomerase compare
PS417_07615 -0.8 -2.5 TetR family transcriptional regulator compare
PS417_04475 -0.8 -2.1 hypothetical protein compare
PS417_20025 -0.8 -1.3 alpha-ribazole phosphatase compare
PS417_01570 -0.8 -2.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_23845 -0.8 -1.5 hemin ABC transporter ATP-binding protein compare


Specific Phenotypes

For 1 genes in this experiment