Experiment set19IT012 for Pseudomonas putida KT2440

Compare to:

Temperature shift 10_to_21

200 most important genes:

  gene name fitness t score description  
PP_0293 -6.7 -4.0 Imidazole glycerol phosphate synthase subunit HisF compare
PP_2168 -6.0 -12.8 Transaldolase compare
PP_0967 -6.0 -12.7 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_4678 -5.8 -17.9 Ketol-acid reductoisomerase compare
PP_2371 -5.7 -6.7 Sulphite reductase hemoprotein, beta subunit compare
PP_4680 -5.5 -17.0 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_1079 -5.5 -9.1 Ornithine carbamoyltransferase compare
PP_4679 -5.5 -8.3 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_0082 -5.4 -7.4 tryptophan synthase alpha chain compare
PP_0083 -5.3 -7.3 tryptophan synthase beta chain compare
PP_3511 -5.2 -8.4 Branched-chain-amino-acid aminotransferase compare
PP_1986 -5.2 -4.1 3-isopropylmalate dehydratase small subunit compare
PP_5014 -5.1 -3.5 Phosphoribosyl-AMP cyclohydrolase compare
PP_0966 -5.0 -12.8 Histidinol dehydrogenase compare
PP_0184 -5.0 -8.9 Argininosuccinate lyase compare
PP_5098 -4.9 -11.0 methionine biosynthesis protein MetW compare
PP_1985 -4.8 -6.3 3-isopropylmalate dehydratase large subunit compare
PP_1988 -4.8 -8.6 3-isopropylmalate dehydrogenase compare
PP_2327 -4.6 -8.2 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_0289 -4.5 -7.9 Imidazoleglycerol-phosphate dehydratase compare
PP_4890 -4.5 -5.9 ATP phosphoribosyltransferase regulatory subunit compare
PP_5289 -4.4 -5.8 Acetylglutamate kinase compare
PP_4909 -4.4 -8.4 phosphoserine phosphatase compare
PP_3999 -4.4 -8.8 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_0422 -4.3 -4.1 Indole-3-glycerol phosphate synthase compare
PP_0965 -4.3 -7.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_5347 -4.2 -12.1 pyruvate carboxylase subunit A compare
PP_1088 -4.1 -12.4 Argininosuccinate synthase compare
PP_0417 -4.0 -13.9 Anthranilate synthase component 1 compare
PP_5346 -3.9 -6.8 pyruvate carboxylase subunit B compare
PP_1995 -3.9 -7.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_5097 -3.9 -12.5 homoserine O-acetyltransferase compare
PP_4696 -3.9 -7.4 Nitrogen regulation protein NR(I) compare
PP_0292 -3.8 -2.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_5128 -3.6 -8.1 Dihydroxy-acid dehydratase compare
PP_5155 -3.6 -6.3 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_1025 -3.6 -9.1 2-isopropylmalate synthase compare
PP_4804 -3.5 -4.2 RlpA-like lipoprotein compare
PP_5303 -3.5 -5.2 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_4126 -3.3 -2.3 NADH-quinone oxidoreductase subunit I compare
PP_3946 -3.3 -2.2 HTH-type transcriptional repressor NicR compare
PP_5348 -3.3 -7.9 Transcriptional regulator, LysR family compare
PP_2001 -3.2 -7.8 O-succinylhomoserine sulfhydrylase compare
PP_0421 -3.2 -6.3 Anthranilate phosphoribosyltransferase compare
PP_2378 -3.1 -4.2 Fe/S biogenesis protein NfuA compare
PP_5185 -3.1 -7.1 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_1362 -3.1 -5.0 pyruvate kinase II compare
PP_0366 -3.0 -5.8 dethiobiotin synthetase compare
PP_4700 -2.7 -1.8 pantothenate synthetase compare
PP_4098 -2.6 -2.5 UvrABC system protein C compare
PP_5095 -2.6 -1.8 pyrroline-5-carboxylate reductase compare
PP_0290 -2.5 -5.0 Imidazole glycerol phosphate synthase subunit HisH compare
PP_0420 -2.5 -6.9 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_5015 -2.4 -3.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_1654 -2.4 -3.9 cysteine synthase B compare
PP_2388 -2.4 -3.8 Transporter, LysE family compare
PP_5217 -2.3 -8.1 Polyphosphate kinase compare
PP_4984 -2.3 -7.2 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PP_0959 -2.2 -2.4 phospholipid ABC transporter compare
PP_0362 -2.2 -8.7 Biotin synthase compare
PP_2328 -2.2 -5.2 Phosphoadenosine phosphosulfate reductase compare
PP_0363 -2.2 -7.3 8-amino-7-oxononanoate synthase compare
PP_1231 -2.2 -3.9 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_2568 -2.1 -1.8 Ring-cleaving dioxygenase compare
PP_1734 -2.1 -4.6 Probable septum site-determining protein MinC compare
PP_1217 -2.1 -5.8 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_1022 -2.0 -3.7 glucose 6-phosphate-1-dehydrogenase compare
PP_5216 -2.0 -1.4 exopolyphosphatase compare
PP_4785 -2.0 -7.3 conserved exported protein of unknown function compare
PP_0364 -2.0 -5.6 pimeloyl-[acp] methyl ester esterase compare
PP_4058 -1.9 -7.3 1,4-alpha-glucan branching enzyme compare
PP_1912 -1.9 -5.0 Phosphate acyltransferase compare
PP_4782 -1.9 -3.3 Phosphomethylpyrimidine kinase compare
PP_0365 -1.9 -6.3 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PP_0291 -1.8 -2.1 conserved protein of unknown function compare
PP_4936 -1.8 -5.6 O-antigen polymerase compare
PP_0653 -1.8 -1.7 conserved protein of unknown function compare
PP_3417 -1.7 -5.3 D-gluconate transporter compare
PP_5350 -1.7 -2.5 Transcriptional regulator, RpiR family compare
PP_5104 -1.7 -6.0 thiazole synthase compare
PP_1568 -1.7 -1.7 conserved protein of unknown function compare
PP_4480 -1.7 -6.4 arginine N-succinyltransferase, subunit alpha compare
PP_4994 -1.7 -3.9 conserved protein of unknown function compare
PP_4099 -1.6 -15.4 two-componenent system BarA/UvrY - regulatory subunit compare
PP_5203 -1.6 -4.9 5-formyltetrahydrofolate cyclo-ligase compare
PP_2370 -1.6 -1.9 conserved protein of unknown function compare
PP_4938 -1.5 -7.2 putative Glycosyl transferase compare
PP_0957 -1.5 -2.0 D-arabinose 5-phosphate isomerase compare
PP_1650 -1.5 -12.5 Sensor protein GacS compare
PP_3821 -1.4 -6.7 UTP-glucose-1-phosphate uridylyltransferase compare
PP_1656 -1.4 -5.5 ATP:GTP 3'-pyrophosphotransferase compare
PP_0846 -1.4 -1.2 DnaK-like molecular chaperone specific for IscU compare
PP_4964 -1.4 -2.5 D-erythrose 4-phosphate dehydrogenase compare
PP_1428 -1.4 -1.6 Sigma factor AlgU negative regulatory protein compare
PP_1629 -1.4 -4.6 Protein RecA compare
PP_1733 -1.4 -2.0 membrane ATPase of the MinC-MinD-MinE system compare
PP_0593 -1.4 -1.1 putative ribosome-binding factor compare
PP_0440 -1.3 -2.2 Elongation factor Tu-A compare
PP_0547 -1.3 -6.6 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PP_1655 -1.3 -2.8 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
PP_5320 -1.3 -5.4 two-component system DNA-binding transcriptional dual response regulator PhoB conserved
PP_1344 -1.3 -1.4 conserved protein of unknown function compare
PP_3924 -1.3 -2.4 conserved protein of unknown function compare
PP_0513 -1.3 -2.1 DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP compare
PP_4793 -1.3 -2.3 conserved protein of unknown function compare
PP_1011 -1.3 -5.1 glucokinase compare
PP_1898 -1.3 -2.8 MotA/TolQ/ExbB proton channel family protein compare
PP_2820 -1.3 -2.6 HTH-type transcriptional regulator nfxB compare
PP_0735 -1.3 -1.3 molybdopterin-synthase adenylyltransferase compare
PP_5227 -1.3 -5.2 diaminopimelate decarboxylase compare
PP_1664 -1.3 -2.5 phosphoribosylglycinamide formyltransferase 1 compare
PP_2390 -1.2 -4.8 Transcriptional regulator, LysR family compare
PP_3824 -1.2 -2.8 conserved exported protein of unknown function compare
PP_0719 -1.2 -1.1 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_1304 -1.2 -4.6 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase compare
PP_4004 -1.2 -2.3 DNA translocase FtsK compare
PP_3903 -1.2 -1.3 conserved protein of unknown function compare
PP_4895 -1.2 -2.4 tRNA dimethylallyltransferase compare
PP_5232 -1.2 -2.1 conserved protein of unknown function compare
PP_5533 -1.2 -1.5 conserved protein of unknown function compare
PP_1233 -1.2 -2.4 sulfurtransferase compare
PP_2088 -1.2 -2.3 RNA polymerase sigma factor SigX compare
PP_0434 -1.2 -4.1 Anhydro-N-acetylmuramic acid kinase compare
PP_2893 -1.1 -6.1 conserved exported protein of unknown function compare
PP_0872 -1.1 -4.1 Peptide chain release factor 3 compare
PP_2145 -1.1 -1.9 beta-N-acetylglucosaminidase compare
PP_0999 -1.1 -1.5 carbamate kinase compare
PP_5310 -1.1 -3.4 junction-specific ATP-dependent DNA helicase compare
PP_4560 -1.1 -1.6 putative Ribonuclease BN compare
PP_2433 -1.1 -1.6 conserved protein of unknown function compare
PP_0406 -1.1 -2.1 Nucleotidyltransferase family protein compare
PP_4699 -1.1 -2.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_0261 -1.0 -3.4 adenosine-3'(2'),5'-bisphosphate nucleotidase compare
PP_1128 -1.0 -1.5 OmpA family protein compare
PP_4944 -1.0 -2.1 Carbamoyltransferase compare
PP_0339 -1.0 -0.7 Pyruvate dehydrogenase E1 component compare
PP_5202 -1.0 -2.8 putative cell division protein compare
PP_4693 -1.0 -2.5 RNA polymerase-binding transcription factor DksA compare
PP_2389 -1.0 -3.2 conserved protein of unknown function compare
PP_1122 -1.0 -1.5 OmpA family protein compare
PP_0610 -1.0 -2.2 conserved exported protein of unknown function compare
PP_3938 -1.0 -1.2 conserved protein of unknown function compare
PP_1303 -1.0 -3.5 Sulfate adenylyltransferase subunit 2 compare
PP_0673 -0.9 -2.2 conserved protein of unknown function compare
PP_2903 -0.9 -2.3 peptidyl-prolyl cis-trans isomerase B (rotamase B) compare
PP_2137 -0.9 -2.2 beta-ketoadipyl CoA thiolase, beta component compare
PP_4922 -0.9 -4.6 Phosphomethylpyrimidine synthase compare
PP_4724 -0.9 -0.6 Carbamoyl-phosphate synthase small chain compare
PP_1788 -0.9 -1.9 conserved protein of unknown function compare
PP_0122 -0.9 -1.5 conserved exported protein of unknown function compare
PP_5017 -0.9 -0.9 Sec-independent protein translocase protein TatB compare
PP_4396 -0.9 -2.7 conserved protein of unknown function compare
PP_5505 -0.9 -1.6 conserved transmembrane protein of unknown function compare
PP_2511 -0.8 -1.5 conserved protein of unknown function compare
PP_2756 -0.8 -1.7 conserved protein of unknown function compare
PP_2892 -0.8 -5.4 conserved exported protein of unknown function compare
PP_0787 -0.8 -1.3 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_0368 -0.8 -5.5 putative Acyl-CoA dehydrogenase compare
PP_0789 -0.8 -3.4 N-acetyl-anhydromuramyl-L-alanine-amidase compare
PP_5331 -0.8 -1.8 Long-chain acyl-CoA thioester hydrolase compare
PP_4045 -0.8 -2.1 conserved protein of unknown function compare
PP_1783 -0.8 -1.3 dTDP-glucose pyrophosphorylase compare
PP_2497 -0.8 -1.6 conserved protein of unknown function compare
PP_1764 -0.8 -1.6 Phosphoglycolate phosphatase 2 compare
PP_5639 -0.8 -3.3 conserved exported protein of unknown function compare
PP_3481 -0.8 -1.0 conserved exported protein of unknown function compare
PP_2402 -0.8 -1.3 putative Sensor histidine kinase compare
PP_5230 -0.8 -1.6 Tyrosine recombinase XerC compare
PP_1236 -0.8 -3.0 putative Glycine cleavage system transcriptional repressor compare
PP_2172 -0.8 -2.0 conserved exported protein of unknown function compare
PP_2725 -0.8 -1.1 Protease PfpI compare
PP_1426 -0.8 -4.1 L-aspartate oxidase compare
PP_1872 -0.7 -4.2 glutamate-pyruvate aminotransferase compare
PP_5093 -0.7 -0.9 twitching motility protein compare
PP_0065 -0.7 -2.1 NAD-binding component of TrK potassium transporter compare
PP_1153 -0.7 -3.1 putative lipoprotein compare
PP_5558 -0.7 -1.6 putative transcriptional xre family of phage origin compare
PP_5007 -0.7 -2.3 Polyhydroxyalkanoate granule-associated protein GA2 compare
PP_4824 -0.7 -2.9 Sensor histidine kinase/response regulator compare
PP_5321 -0.7 -3.4 two-component system sensory histidine kinase conserved
PP_3477 -0.7 -3.0 Putative secretion type II protein related to protein G compare
PP_2885 -0.7 -2.6 putative Transporter compare
PP_4131 -0.7 -2.2 NADH-quinone oxidoreductase subunit N compare
PP_1468 -0.7 -1.7 Tyrosine recombinase XerD compare
PP_4135 -0.7 -2.9 conserved protein of unknown function compare
PP_t12 -0.7 -0.7 tRNA-Thr compare
PP_3833 -0.7 -2.0 Response regulator compare
PP_5507 -0.7 -1.4 protein of unknown function compare
PP_2302 -0.7 -2.3 DNA-binding, ATP-dependent protease compare
PP_3323 -0.7 -2.4 CobW/P47K family protein compare
PP_5393 -0.7 -0.8 putative metal-binding chaperone compare
PP_5035 -0.7 -3.1 Histidine utilization repressor compare
PP_1346 -0.7 -2.1 Glutamate N-acetyltransferase/Amino-acid acetyltransferase compare
PP_4236 -0.7 -2.7 putative Thiol:disulfide interchange protein dsbE compare
PP_4332 -0.7 -1.9 Chemotaxis protein CheW compare
PP_0666 -0.7 -1.5 conserved protein of unknown function compare
PP_4517 -0.7 -1.6 conserved protein of unknown function compare
PP_5621 -0.7 -1.7 protein of unknown function compare
PP_1348 -0.7 -2.7 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase compare
PP_3578 -0.7 -4.5 phosphoglucomutase compare


Specific Phenotypes

For 1 genes in this experiment

For temperature shift D-Glucose in Pseudomonas putida KT2440

For temperature shift D-Glucose across organisms