Experiment set19IT006 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_19730 -9.4 -3.3 flagellar biosynthesis protein FliR compare
PS417_18600 -8.4 -2.9 isopropylmalate isomerase compare
PS417_27835 -7.9 -7.2 endoribonuclease compare
PS417_01565 -7.7 -3.5 imidazole glycerol phosphate synthase compare
PS417_01575 -7.7 -3.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_23805 -7.7 -4.0 acetolactate synthase 3 regulatory subunit compare
PS417_18530 -7.6 -4.8 O-succinylhomoserine sulfhydrylase compare
PS417_21595 -7.4 -3.8 flagellar biosynthesis protein FlgN compare
PS417_21565 -7.2 -4.7 flagellar basal body rod protein FlgC compare
PS417_18585 -7.1 -4.5 3-isopropylmalate dehydrogenase compare
PS417_04415 -7.1 -6.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_25725 -7.0 -16.3 anthranilate synthase component I compare
PS417_19650 -7.0 -3.6 chemotaxis protein CheW compare
PS417_01855 -6.9 -2.3 phosphoribosyl-AMP cyclohydrolase compare
PS417_05635 -6.9 -8.8 membrane protein compare
PS417_19705 -6.9 -2.7 flagellar biosynthesis regulator FlhF compare
PS417_19690 -6.8 -3.4 histidine kinase compare
PS417_23950 -6.8 -2.3 polynucleotide phosphorylase/polyadenylase compare
PS417_04420 -6.8 -10.3 histidinol dehydrogenase compare
PS417_19675 -6.8 -4.0 chemotaxis protein CheY compare
PS417_19660 -6.6 -6.6 cobalamin biosynthesis protein CobQ compare
PS417_26740 -6.6 -7.9 homoserine acetyltransferase compare
PS417_27040 -6.5 -2.2 3-phosphoglycerate dehydrogenase compare
PS417_00185 -6.4 -3.4 tryptophan synthase subunit beta compare
PS417_02005 -6.3 -12.1 glutamate synthase compare
PS417_18560 -6.2 -7.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_21585 -6.2 -13.1 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_19665 -6.2 -4.1 flagellar motor protein MotD compare
PS417_26995 -6.1 -8.2 phosphoserine phosphatase compare
PS417_23800 -6.0 -13.3 ketol-acid reductoisomerase compare
PS417_18595 -5.9 -3.4 3-isopropylmalate dehydratase compare
PS417_12855 -5.8 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19745 -5.7 -6.4 flagellar assembly protein FliO compare
PS417_23810 -5.7 -12.6 acetolactate synthase 3 catalytic subunit compare
PS417_25720 -5.7 -5.8 anthranilate synthase component II compare
PS417_19800 -5.6 -2.2 flagellar motor switch protein FliG compare
PS417_19880 -5.4 -6.1 flagellar basal body L-ring protein compare
PS417_22210 -5.4 -2.4 AraC family transcriptional regulator compare
PS417_19850 -5.3 -10.8 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_19710 -5.2 -16.6 flagellar biosynthesis protein FlhA compare
PS417_19655 -5.2 -3.3 chemotaxis protein CheW compare
PS417_08245 -5.2 -1.0 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_19795 -5.1 -9.1 flagellar assembly protein FliH compare
PS417_19765 -5.0 -8.5 flagellar hook-length control protein compare
PS417_19735 -5.0 -3.6 flagellar biosynthesis protein FliQ compare
PS417_08135 -5.0 -4.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19840 -5.0 -13.0 flagellar cap protein FliD compare
PS417_22565 -4.9 -1.0 formyltetrahydrofolate deformylase compare
PS417_21555 -4.8 -11.3 flagellar hook protein FlgE compare
PS417_18310 -4.8 -1.6 hypothetical protein compare
PS417_19835 -4.8 -1.4 flagellar biosynthesis protein FliS compare
PS417_19695 -4.8 -6.2 flagellar biosynthesis sigma factor compare
PS417_05975 -4.7 -1.0 chemotaxis protein CheW compare
PS417_02510 -4.6 -2.0 ATP phosphoribosyltransferase regulatory subunit compare
PS417_08220 -4.6 -0.9 epimerase compare
PS417_19825 -4.6 -14.0 ATPase AAA compare
PS417_21570 -4.5 -6.3 flagellar basal body rod protein FlgB compare
PS417_20160 -4.5 -5.0 cysteine synthase compare
PS417_16465 -4.5 -7.2 sirohydrochlorin ferrochelatase compare
PS417_02000 -4.5 -10.0 glutamate synthase compare
PS417_19740 -4.5 -7.9 flagellar biosynthesis protein flip compare
PS417_27795 -4.5 -0.9 orotate phosphoribosyltransferase compare
PS417_21690 -4.4 -6.0 N-succinylarginine dihydrolase compare
PS417_19865 -4.4 -8.7 flagellar hook protein FlgK compare
PS417_25710 -4.4 -1.2 indole-3-glycerol-phosphate synthase compare
PS417_16490 -4.4 -1.2 cell division protein FtsK compare
PS417_19860 -4.3 -13.0 flagellar hook protein FlgL compare
PS417_19885 -4.3 -3.2 flagellar basal body rod protein FlgG compare
PS417_23995 -4.3 -0.9 preprotein translocase subunit SecG compare
PS417_02280 -4.2 -2.0 GlcNAc-PI de-N-acetylase compare
PS417_08230 -4.2 -1.8 lipopolysaccharide biosynthesis protein RfbH compare
PS417_06375 -4.1 -0.8 deoxycytidine triphosphate deaminase compare
PS417_01915 -4.1 -0.8 ATP-dependent protease ATP-binding subunit HslU compare
PS417_21695 -4.1 -2.4 succinylglutamate-semialdehyde dehydrogenase compare
PS417_18690 -4.1 -3.7 aromatic amino acid aminotransferase compare
PS417_22795 -4.1 -1.6 exclusion suppressor FxsA compare
PS417_19630 -4.0 -3.0 LuxR family transcriptional regulator compare
PS417_19725 -4.0 -6.0 flagellar biosynthesis protein FlhB compare
PS417_01580 -4.0 -1.1 imidazole glycerol phosphate synthase compare
PS417_03465 -4.0 -1.7 type III secretion protein compare
PS417_20985 -3.9 -1.9 porin compare
PS417_22060 -3.9 -1.1 hypothetical protein compare
PS417_12290 -3.8 -5.9 sulfite reductase compare
PS417_19870 -3.8 -3.1 flagellar rod assembly protein FlgJ compare
PS417_19785 -3.8 -4.6 flagellar biogenesis protein compare
PS417_26985 -3.7 -4.2 phosphoenolpyruvate-protein phosphotransferase compare
PS417_19755 -3.7 -1.8 flagellar motor switch protein FliM compare
PS417_21575 -3.7 -2.7 chemotaxis protein compare
PS417_02210 -3.6 -4.9 diguanylate cyclase compare
PS417_26890 -3.6 -5.5 dihydroxy-acid dehydratase compare
PS417_23110 -3.6 -5.0 2-isopropylmalate synthase compare
PS417_01850 -3.6 -3.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_00045 -3.5 -1.7 glycerol acyltransferase compare
PS417_18025 -3.5 -3.5 cytochrome C compare
PS417_00180 -3.5 -2.1 tryptophan synthase subunit alpha compare
PS417_25715 -3.5 -3.4 anthranilate phosphoribosyltransferase compare
PS417_19645 -3.5 -3.0 chemotaxis protein compare
PS417_26805 -3.4 -1.0 cell division protein FtsE compare
PS417_20635 -3.4 -1.0 ABC transporter ATP-binding protein compare
PS417_05365 -3.3 -1.7 FAD-binding protein compare
PS417_08225 -3.3 -3.1 acetolactate synthase compare
PS417_20715 -3.3 -3.1 cytochrome Cbb3 compare
PS417_24705 -3.3 -2.5 D-alanyl-D-alanine carboxypeptidase compare
PS417_18540 -3.3 -3.3 colicin V production CvpA compare
PS417_05575 -3.2 -6.7 Glycerol kinase (EC 2.7.1.30) (from data) compare
PS417_08195 -3.2 -8.2 hypothetical protein compare
PS417_10040 -3.2 -1.1 MFS transporter compare
PS417_27245 -3.2 -5.3 aminotransferase DegT compare
PS417_01570 -3.2 -1.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_04365 -3.1 -0.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_27585 -3.1 -2.1 diaminopimelate epimerase compare
PS417_12310 -3.1 -8.3 methionine synthase compare
PS417_21680 -3.1 -3.1 succinylglutamate desuccinylase compare
PS417_21125 -3.1 -4.0 phosphoadenosine phosphosulfate reductase compare
PS417_26695 -3.1 -0.8 uracil phosphoribosyltransferase compare
PS417_21655 -3.1 -0.8 aspartate kinase compare
PS417_27800 -3.1 -2.1 exodeoxyribonuclease III compare
PS417_27870 -3.1 -3.5 ATP-dependent DNA helicase RecG compare
PS417_12355 -3.0 -2.4 magnesium chelatase compare
PS417_22445 -3.0 -3.8 ATP-dependent DNA helicase RuvB compare
PS417_08155 -3.0 -1.4 integration host factor subunit beta compare
PS417_10985 -3.0 -1.0 NADH:flavin oxidoreductase compare
PS417_27195 -3.0 -1.2 N-acetylglutamate synthase compare
PS417_19805 -3.0 -3.3 flagellar M-ring protein FliF compare
PS417_21390 -3.0 -2.7 hypothetical protein compare
PS417_01955 -3.0 -8.2 peptidase compare
PS417_02555 -2.9 -12.0 exoribonuclease R compare
PS417_23545 -2.9 -2.4 gamma-glutamyl kinase compare
PS417_22690 -2.8 -3.9 phosphogluconate dehydratase compare
PS417_08125 -2.8 -0.6 prephenate dehydratase compare
PS417_08170 -2.8 -9.2 capsular biosynthesis protein compare
PS417_02950 -2.8 -3.2 tRNA-dihydrouridine synthase B compare
PS417_26745 -2.8 -2.4 methionine biosynthesis protein MetW compare
PS417_23770 -2.8 -1.2 exodeoxyribonuclease V subunit alpha compare
PS417_15110 -2.7 -5.9 protein BatD compare
PS417_04650 -2.7 -0.7 D-alanine--D-alanine ligase compare
PS417_26730 -2.7 -0.8 pyrroline-5-carboxylate reductase compare
PS417_15495 -2.7 -1.4 FAD-dependent oxidoreductase compare
PS417_26990 -2.7 -0.8 RNA pyrophosphohydrolase compare
PS417_23900 -2.7 -7.9 poly(A) polymerase compare
PS417_26900 -2.6 -1.6 L-cystine transporter tcyP compare
PS417_02415 -2.6 -3.0 phosphoserine phosphatase compare
PS417_26510 -2.6 -7.5 5,10-methylenetetrahydrofolate reductase compare
PS417_00160 -2.6 -3.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
PS417_23025 -2.6 -5.3 murein transglycosylase compare
PS417_21710 -2.5 -3.4 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
PS417_08205 -2.5 -3.3 acetyltransferase compare
PS417_06245 -2.5 -1.7 zinc metallopeptidase RseP compare
PS417_19820 -2.5 -3.3 histidine kinase compare
PS417_05820 -2.5 -1.5 recombinase RecX compare
PS417_19790 -2.4 -2.6 ATP synthase compare
PS417_16990 -2.4 -6.2 acyl-CoA dehydrogenase compare
PS417_10275 -2.4 -2.5 histidine kinase compare
PS417_23095 -2.4 -0.8 exodeoxyribonuclease compare
PS417_22620 -2.4 -3.7 pyruvate kinase compare
PS417_06540 -2.4 -1.6 membrane protein compare
PS417_21560 -2.4 -3.5 flagellar basal body rod modification protein FlgD compare
PS417_05580 -2.4 -5.6 glycerol uptake facilitator GlpF compare
PS417_07565 -2.3 -1.9 hypothetical protein compare
PS417_21320 -2.3 -2.6 transcriptional regulator compare
PS417_02255 -2.3 -2.3 lipopolysaccharide kinase compare
PS417_06895 -2.3 -3.5 DNA-binding protein compare
PS417_03930 -2.3 -6.7 thymidine phosphorylase compare
PS417_20585 -2.3 -5.7 chemotaxis protein compare
PS417_08540 -2.3 -2.0 RNA helicase compare
PS417_21630 -2.3 -1.8 magnesium transporter compare
PS417_27640 -2.2 -1.0 TetR family transcriptional regulator compare
PS417_02475 -2.2 -2.0 N-acetylmuramoyl-L-alanine amidase compare
PS417_12175 -2.2 -3.1 peptide ABC transporter permease compare
PS417_24835 -2.2 -3.7 hypothetical protein compare
PS417_02485 -2.2 -3.7 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_06645 -2.2 -7.4 RNA polymerase-associated protein RapA compare
PS417_27305 -2.2 -5.8 5-formyltetrahydrofolate cyclo-ligase compare
PS417_19830 -2.2 -2.6 flagellar assembly protein FliT compare
PS417_15105 -2.1 -6.5 membrane protein compare
PS417_00370 -2.1 -0.9 hypothetical protein compare
PS417_16555 -2.1 -1.6 cupin compare
PS417_21035 -2.0 -6.4 multidrug transporter compare
PS417_20105 -2.0 -12.8 glycosyl transferase compare
PS417_20650 -2.0 -6.8 hypothetical protein compare
PS417_03145 -2.0 -2.1 acetyl-CoA acetyltransferase compare
PS417_00345 -2.0 -1.8 copper-binding protein compare
PS417_00075 -2.0 -2.0 hypothetical protein compare
PS417_27435 -2.0 -6.0 polyphosphate kinase compare
PS417_05865 -2.0 -1.9 hypothetical protein compare
PS417_22175 -1.9 -1.5 amino acid transporter LysE compare
PS417_10720 -1.9 -5.8 chemotaxis protein CheY compare
PS417_00535 -1.9 -2.4 Holliday junction resolvase compare
PS417_14835 -1.9 -2.6 amidase compare
PS417_27290 -1.9 -1.4 hypothetical protein compare
PS417_15085 -1.9 -3.7 ATPase AAA compare
PS417_21430 -1.9 -1.5 3-oxoacyl-ACP synthase compare
PS417_25225 -1.8 -1.6 MFS transporter compare
PS417_06095 -1.8 -1.5 energy transducer TonB compare
PS417_19065 -1.8 -0.8 monooxygenase compare
PS417_16520 -1.8 -1.9 cold-shock protein compare
PS417_20875 -1.8 -4.6 chromosome segregation protein SMC compare
PS417_24370 -1.8 -0.7 (2Fe-2S)-binding protein compare
PS417_22450 -1.8 -0.9 ATP-dependent DNA helicase RuvA compare
PS417_27520 -1.8 -2.8 uroporphyrin-III methyltransferase compare


Specific Phenotypes

For 4 genes in this experiment