Experiment set19IT006 for Pseudomonas simiae WCS417

200 most detrimental genes:

gene	name	fitness	t score	description
PS417_27875		+3.2	18.6	histidine kinase
PS417_26645		+3.1	10.4	chemotaxis protein
PS417_20690		+2.9	8.9	chemotaxis protein
PS417_26655		+2.6	5.9	chemotaxis protein
PS417_26660		+2.5	8.0	protein PilI
PS417_25270		+2.5	11.8	NrdR family transcriptional regulator
PS417_07620		+2.3	2.6	beta-hexosaminidase
PS417_15710		+2.2	3.5	nitrate reductase
PS417_15695		+2.2	4.3	molybdenum cofactor biosynthesis protein A
PS417_02985		+2.2	14.2	diguanylate cyclase
PS417_26175		+2.1	1.8	sarcosine oxidase subunit gamma
PS417_18205		+2.1	1.9	aldehyde dehydrogenase
PS417_15705		+1.9	3.6	nitrate reductase
PS417_02435		+1.9	9.0	flagellar motor protein MotA
PS417_20520		+1.8	1.8	3-phosphoglycerate kinase
PS417_01630		+1.8	1.3	hypothetical protein
PS417_18400		+1.7	3.6	D-ribose ABC transporter, ATPase component RbsA (from data)
PS417_26650		+1.6	5.5	histidine kinase
PS417_12660		+1.6	2.6	hypothetical protein
PS417_00915		+1.5	3.5	aminotransferase
PS417_24675		+1.5	2.4	lipoyl synthase
PS417_00510		+1.5	1.8	membrane protein
PS417_10480		+1.5	2.5	glutathione S-transferase
PS417_23150		+1.5	2.8	Cro/Cl family transcriptional regulator
PS417_11930		+1.5	6.3	hypothetical protein
PS417_27610		+1.5	4.1	hypothetical protein
PS417_27935		+1.5	2.1	type VI secretion protein
PS417_25700		+1.4	3.0	cyclic AMP receptor protein
PS417_21180		+1.4	2.7	short-chain dehydrogenase
PS417_10575		+1.4	2.1	DNA alkylation repair protein
PS417_07875		+1.4	1.5	hypothetical protein
PS417_20025		+1.3	2.5	alpha-ribazole phosphatase
PS417_22375		+1.3	1.1	cold-shock protein
PS417_02440		+1.3	2.1	flagellar motor protein MotB
PS417_15715		+1.3	4.2	nitrate reductase
PS417_27005		+1.3	1.4	membrane protein
PS417_06145		+1.3	1.3	hypothetical protein
PS417_22630		+1.2	1.7	hypothetical protein
PS417_27155		+1.2	0.9	aliphatic sulfonates transport ATP-binding subunit
PS417_01585		+1.2	4.1	amino acid ABC transporter substrate-binding protein
PS417_23715		+1.2	2.8	cupin
PS417_11615		+1.2	2.0	urea ABC transporter ATP-binding protein
PS417_11900		+1.2	6.5	conjugal transfer protein TraR
PS417_02070		+1.1	1.1	membrane protein
PS417_14810		+1.1	2.0	Fosmidomycin resistance protein
PS417_25970		+1.1	5.4	diguanylate cyclase
PS417_12015		+1.1	1.6	phosphoglycerate mutase
PS417_27815		+1.1	0.8	hypothetical protein
PS417_03100		+1.1	1.3	pilus assembly protein
PS417_08420		+1.1	1.9	lipoprotein
PS417_08335		+1.1	1.4	hypothetical protein
PS417_06875		+1.1	2.4	iron dicitrate transport regulator FecR
PS417_13300		+1.1	1.7	short-chain dehydrogenase
PS417_24135		+1.1	2.0	hypothetical protein
PS417_27445		+1.1	4.5	membrane protein
PS417_13305		+1.1	1.1	hypothetical protein
PS417_02455		+1.1	3.5	putative transporter, required for glycine utilization (from data)
PS417_06500		+1.0	1.1	hypothetical protein
PS417_28405		+1.0	1.3	hypothetical protein
PS417_18395		+1.0	2.4	D-ribose ABC transporter, permease component RbsC (from data)
PS417_08090		+1.0	0.5	3-oxoacyl-ACP reductase
PS417_28355		+1.0	1.5	cardiolipin synthetase
PS417_07845		+1.0	1.7	transcriptional regulator
PS417_05160		+1.0	0.7	DNA polymerase III subunit chi
PS417_05900		+1.0	1.4	TetR family transcriptional regulator
PS417_21100		+1.0	3.3	alpha-L-glutamate ligase
PS417_14065		+1.0	2.3	UTP--glucose-1-phosphate uridylyltransferase
PS417_18455		+1.0	1.7	hypothetical protein
PS417_26400		+1.0	2.5	metal-dependent hydrolase
PS417_13545		+1.0	1.2	arginine aminotransferase
PS417_23535		+1.0	1.5	glutathione peroxidase
PS417_03915		+1.0	1.4	tRNA-Thr
PS417_10710		+1.0	1.1	GNAT family acetyltransferase
PS417_08510		+1.0	2.4	LysR family transcriptional regulator
PS417_22955		+1.0	3.4	Fe-S protein
PS417_12935		+1.0	1.9	RNA polymerase sigma factor
PS417_18640		+0.9	1.9	hydrolase
PS417_04230		+0.9	1.6	lipoprotein
PS417_16195		+0.9	1.0	AraC family transcriptional regulator
PS417_03790		+0.9	1.6	pilus assembly protein PilW
PS417_17590		+0.9	1.3	ABC transporter substrate-binding protein
PS417_24885		+0.9	2.3	transcriptional regulator
PS417_05235		+0.9	2.0	peptidase inhibitor I42
PS417_21840		+0.9	2.1	chemotaxis protein
PS417_08415		+0.9	3.8	hypothetical protein
PS417_18070		+0.9	1.0	general secretion pathway protein GspH
PS417_23455		+0.9	2.0	LrgA
PS417_13540		+0.9	2.6	sodium:proton antiporter
PS417_00900		+0.9	1.9	4-aminobutyrate aminotransferase
PS417_02105		+0.9	1.5	acyl carrier protein
PS417_15975		+0.9	1.1	glutamate carboxypeptidase
PS417_26875		+0.9	3.4	histidine kinase
PS417_03785		+0.9	1.0	pilus assembly protein PilV
PS417_16275		+0.9	2.2	hypothetical protein
PS417_08620		+0.9	0.9	hypothetical protein
PS417_02110		+0.9	1.4	acyl carrier protein
PS417_16710		+0.9	2.3	hydrolase
PS417_08545		+0.9	0.9	aromatic ring-opening dioxygenase LigB
PS417_22990		+0.9	0.9	iron dicitrate transport regulator FecR
PS417_21095		+0.9	4.6	membrane protein
PS417_17780		+0.9	1.2	Ais protein
PS417_24530		+0.9	3.1	ABC transporter substrate-binding protein
PS417_06775		+0.9	3.0	antibiotic transporter
PS417_18810		+0.9	2.5	hypothetical protein
PS417_20310		+0.9	1.2	hypothetical protein
PS417_22370		+0.9	3.3	Aminomethyltransferase (EC 2.1.2.10) (from data)
PS417_05840		+0.9	2.2	LuxR family transcriptional regulator
PS417_28440		+0.9	2.3	hypothetical protein
PS417_22040		+0.8	1.5	GNAT family acetyltransferase
PS417_19150		+0.8	2.9	ABC transporter ATP-binding protein
PS417_18060		+0.8	1.9	general secretion pathway protein GspJ
PS417_18040		+0.8	1.2	general secretion pathway protein GspN
PS417_01135		+0.8	1.5	taurine dioxygenase
PS417_26335		+0.8	0.9	BetI family transcriptional regulator
PS417_17000		+0.8	1.0	MerR family transcriptional regulator
PS417_06685		+0.8	0.7	beta-ketoadipyl CoA thiolase
PS417_23475		+0.8	1.1	hypothetical protein
PS417_17350		+0.8	1.2	copper resistance protein CopD
PS417_18990		+0.8	1.6	membrane protein
PS417_14410		+0.8	3.2	ABC transporter substrate-binding protein
PS417_16815		+0.8	1.1	acyl-CoA dehydrogenase
PS417_01685		+0.8	1.3	membrane protein
PS417_22815		+0.8	3.0	permease
PS417_28390		+0.8	1.7	CDP-alcohol phosphatidyltransferase
PS417_19590		+0.8	2.0	enoyl-CoA hydratase
PS417_24650		+0.8	1.2	membrane protein
PS417_13290		+0.8	1.6	AraC family transcriptional regulator
PS417_04675		+0.8	3.1	deoxyribonuclease
PS417_03455		+0.8	1.0	type III secretion protein
PS417_25025		+0.8	2.5	hypothetical protein
PS417_07985		+0.8	1.1	AbrB family transcriptional regulator
PS417_23080		+0.8	1.6	sugar ABC transporter ATPase
PS417_12955		+0.8	2.7	sulfonate ABC transporter substrate-binding protein
PS417_22870		+0.8	1.7	lipoprotein
PS417_04935		+0.8	2.0	hypothetical protein
PS417_05385		+0.8	2.2	hypothetical protein
PS417_27555		+0.8	0.8	DNA-binding protein
PS417_06730		+0.8	0.7	3-carboxy-cis,cis-muconate cycloisomerase
PS417_08025		+0.8	0.9	acetylornithine aminotransferase
PS417_15730		+0.8	3.6	major facilitator transporter
PS417_25380		+0.7	1.6	hypothetical protein
PS417_07240		+0.7	2.2	Transcriptional regulator of deoxyribose catabolism (from data)
PS417_19505		+0.7	0.8	2,4-diaminobutyrate 4-aminotransferase
PS417_02385		+0.7	0.8	esterase
PS417_18390		+0.7	2.6	LacI family transcriptional regulator
PS417_23725		+0.7	2.5	methylmalonate-semialdehyde dehydrogenase
PS417_06635		+0.7	0.5	ferredoxin
PS417_16850		+0.7	1.8	cation:proton antiporter
PS417_18605		+0.7	2.2	LysR family transcriptional regulator
PS417_18020		+0.7	1.2	hypothetical protein
PS417_19335		+0.7	1.8	isochorismatase
PS417_12820		+0.7	1.8	hypothetical protein
PS417_02745		+0.7	1.3	FMN-dependent NADH-azoreductase
PS417_07560		+0.7	0.9	universal stress protein UspA
PS417_20185		+0.7	1.7	ketosteroid isomerase
PS417_01140		+0.7	1.3	taurine ABC transporter permease
PS417_22115		+0.7	1.6	transcriptional regulator
PS417_05860		+0.7	1.4	hypothetical protein
PS417_04310		+0.7	2.1	hypothetical protein
PS417_18420		+0.7	1.5	deoxyribonuclease
PS417_14935		+0.7	1.1	transposase
PS417_27000		+0.7	1.8	membrane protein
PS417_17865		+0.7	1.8	2-keto-3-deoxy-L-rhamnonate aldolase
PS417_16870		+0.7	1.7	short-chain dehydrogenase
PS417_28085		+0.7	3.0	phosphate-binding protein
PS417_14915		+0.7	1.6	host specificity protein
PS417_18920		+0.7	0.8	hypothetical protein
PS417_15200		+0.7	1.7	protein activator of alkane oxidation PraB
PS417_10870		+0.7	1.3	GABA permease
PS417_13075		+0.7	0.4	hypothetical protein
PS417_23615		+0.7	1.7	sulfate transporter
PS417_15375		+0.7	2.0	peptidoglycan-binding protein
PS417_27810		+0.7	2.5	ribonuclease PH
PS417_01005		+0.7	2.8	methionine ABC transporter substrate-binding protein
PS417_23135		+0.7	0.9	GTP-binding protein
PS417_19135		+0.7	3.0	DeoR faimly transcriptional regulator
PS417_18460		+0.7	1.2	transcriptional regulator
PS417_26785		+0.7	1.9	membrane protein
PS417_01425		+0.7	1.4	AraC family transcriptional regulator
PS417_04875		+0.7	0.6	molybdenum cofactor biosynthesis protein MoaE
PS417_17755		+0.7	1.3	hypothetical protein
PS417_01750		+0.7	1.2	histidine ammonia-lyase
PS417_08435		+0.7	1.0	pilus assembly protein PilZ
PS417_11215		+0.7	1.4	arylesterase
PS417_21170		+0.7	1.5	membrane protein
PS417_17605		+0.7	2.5	amino acid transporter
PS417_01080		+0.7	1.4	acyl-CoA dehydrogenase
PS417_01810		+0.7	2.8	ABC transporter permease
PS417_18475		+0.7	1.6	Pyrrolidone-carboxylate peptidase
PS417_01795		+0.7	3.4	glucosyltransferase MdoH
PS417_23380		+0.7	1.0	cytochrome o ubiquinol oxidase subunit III
PS417_18265		+0.7	1.1	AsnC family transcriptional regulator
PS417_22825		+0.7	2.2	hypothetical protein
PS417_23315		+0.7	0.6	transcriptional regulator
PS417_26215		+0.7	1.9	ferredoxin
PS417_18355		+0.7	2.0	DNA-binding protein
PS417_16790		+0.7	1.8	ABC transporter permease
PS417_21730		+0.7	1.4	peptidase M14
PS417_14540		+0.7	0.9	cytochrome C oxidase subunit III
PS417_23415		+0.7	1.8	AraC family transcriptional regulator

Specific Phenotypes

For 4 genes in this experiment