Experiment set18S384 for Agrobacterium fabrum C58

Compare to:

Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct

200 most important genes:

  gene name fitness t score description  
Atu3544 -6.3 -12.1 arsenical pump membrane protein compare
Atu4166 -5.7 -1.5 UDP-glucose 4-epimerase compare
Atu6098 -5.0 -0.9 transcriptional regulator, HTH family compare
Atu0876 -4.9 -1.6 superoxide dismutase compare
Atu1359 -4.9 -0.9 dnaK deletion suppressor protein compare
Atu3008 -4.5 -0.8 hypothetical protein compare
Atu1439 -4.4 -1.4 hypothetical protein compare
Atu8054 -4.3 -0.8 hypothetical protein compare
Atu3311 -4.2 -10.3 phosphomannose isomerase compare
Atu2620 -4.0 -1.0 hypothetical protein compare
Atu0031 -3.9 -0.7 PTS system, IIA component compare
Atu1446 -3.8 -1.4 two component response regulator compare
Atu1647 -3.8 -6.2 ABC transporter, membrane spanning protein compare
Atu3486 -3.7 -1.6 DeoR family transcriptional regulator compare
Atu4187 -3.7 -1.0 tRNA-Met compare
Atu0017 -3.6 -2.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0678 -3.6 -6.3 histidyl-tRNA synthetase compare
Atu1468 -3.6 -9.3 hypothetical protein compare
Atu0036 -3.5 -1.4 hypothetical protein compare
Atu4711 -3.5 -6.5 two component sensor kinase compare
Atu2522 -3.5 -8.7 agrobacterium chromosomal virulence protein B compare
Atu4615 -3.5 -8.3 glucose-1-phosphate thymidylyltransferase compare
Atu1030 -3.5 -1.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1470 -3.4 -0.9 Camphor resistance protein compare
Atu4614 -3.4 -3.2 glycosyltransferase compare
Atu8032 -3.4 -2.5 hypothetical protein compare
Atu8095 -3.3 -5.6 hypothetical protein compare
Atu3120 -3.3 -0.8 hypothetical protein compare
Atu0040 -3.2 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3598 -3.1 -1.0 thiol:disulfide interchange protein compare
Atu0038 -3.1 -4.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1327 -3.1 -1.7 NADH-ubiquinone oxidoreductase compare
Atu0319 -3.0 -1.0 ubiquinone biosynthesis protein compare
Atu1688 -3.0 -7.5 indole-3-glycerol-phosphate synthase compare
Atu0041 -3.0 -1.4 glutamine amidotransferase compare
Atu1364 -2.9 -3.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2073 -2.9 -2.3 membrane protein compare
Atu0953 -2.9 -0.8 hypothetical protein compare
Atu4610 -2.9 -5.6 sugar nucleotide epimerase/dehydratase compare
Atu1573 -2.9 -1.0 hypothetical protein compare
Atu3706 -2.9 -6.3 D-3-phosphoglycerate dehydrogenase compare
Atu0340 -2.9 -1.5 SAM dependent methyltransferase compare
Atu4773 -2.8 -0.7 two component response regulator compare
Atu0978 -2.8 -4.3 two component response regulator compare
Atu8191 -2.8 -0.7 hypothetical protein compare
Atu1644 -2.8 -1.6 hypothetical protein compare
Atu0941 -2.8 -0.7 hypothetical protein compare
Atu0039 -2.8 -1.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu1354 -2.8 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2067 -2.7 -0.7 hypothetical protein compare
Atu2289 -2.7 -7.6 anthranilate synthase component I and II compare
Atu0050 -2.7 -1.8 two component response regulator compare
Atu1028 -2.7 -0.9 hypothetical protein compare
Atu1646 -2.6 -3.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3183 -2.6 -0.7 hypothetical protein compare
Atu1874 -2.6 -1.3 RecA protein compare
Atu2832 -2.5 -2.2 tRNA modification GTPase compare
Atu5125 -2.5 -3.7 GntR family transcriptional regulator compare
Atu2183 -2.5 -3.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3353 -2.4 -5.0 mannose-1-phosphate guanylyltransferase compare
Atu4317 -2.4 -1.6 TetR family transcriptional regulator compare
Atu4608 -2.4 -5.5 hypothetical protein compare
Atu0795 -2.4 -1.5 hypothetical protein compare
Atu4613 -2.3 -6.7 glycosyltransferase compare
Atu2040 -2.3 -3.4 phosphoserine phosphatase compare
Atu8167 -2.3 -7.4 putative transmembrane protein compare
Atu0703 -2.3 -1.3 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu4882 -2.3 -2.0 hypothetical protein compare
Atu0331 -2.3 -1.4 sigma-54 modulation protein compare
Atu2722 -2.3 -5.4 porin compare
Atu0051 -2.2 -1.5 two component sensor kinase compare
Atu0679 -2.2 -3.2 ATP phosphoribosyltransferase compare
Atu0361 -2.2 -0.9 transcriptional regulator compare
Atu0812 -2.2 -2.0 hypothetical protein compare
Atu0030 -2.2 -1.0 phosphocarrier protein HPr compare
Atu0690 -2.2 -1.4 hypothetical protein compare
Atu2113 -2.2 -2.4 N-acetylmuramoyl-L-alanine amidase compare
Atu3613 -2.2 -4.8 hypothetical protein compare
Atu0043 -2.2 -1.8 imidazoleglycerol-phosphate dehydratase compare
Atu2684 -2.1 -1.3 hypothetical protein compare
Atu1619 -2.1 -1.1 protein-export membrane protein SECG compare
Atu0893 -2.1 -3.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu4617 -2.1 -4.3 dTDP-D-glucose-4,6-dehydratase compare
Atu2125 -2.1 -0.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu0153 -2.1 -3.6 transcriptional regulator, Fur family compare
Atu1466 -2.1 -1.1 hypothetical protein compare
Atu8087 -2.0 -0.7 putative peptidoglycan binding protein compare
Atu3707 -2.0 -1.2 phosphoserine aminotransferase compare
Atu3012 -2.0 -1.5 hypothetical protein compare
Atu3603 -2.0 -1.5 two component response regulator compare
Atu4616 -1.9 -0.8 dTDP-4-dehydrorhamnose reductase compare
Atu2207 -1.9 -1.4 two component sensor kinase compare
Atu4323 -1.9 -4.5 ribitol 2-dehydrogenase compare
Atu1750 -1.9 -2.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu3908 -1.9 -3.7 GntR family transcriptional regulator compare
Atu1242 -1.9 -6.9 cytochrome oxidase assembly factor compare
Atu0537 -1.9 -4.0 histidinol dehydrogenase compare
Atu3744 -1.9 -6.7 ABC transporter permease compare
Atu2831 -1.9 -2.9 glucose inhibited division protein A compare
Atu3732 -1.9 -5.9 hemolysin compare
Atu0399 -1.8 -3.6 dihydroorotase compare
Atu2521 -1.8 -7.0 Protein regulated by acid pH compare
Atu8057 -1.8 -2.3 hypothetical protein compare
Atu1694 -1.8 -1.5 hypothetical protein compare
Atu5142 -1.8 -1.6 hypothetical protein compare
Atu1447 -1.8 -1.2 two component sensor kinase compare
Atu2824 -1.8 -2.4 hypothetical protein compare
Atu2274 -1.8 -4.7 cation efflux system protein compare
Atu2484 -1.8 -1.0 hypothetical protein compare
Atu1705 -1.7 -4.7 SEC-independent protein translocase protein compare
Atu1131 -1.7 -3.4 outer membrane protein compare
Atu4890 -1.7 -1.4 IS426 transposase compare
Atu2270 -1.7 -1.0 ATP-dependent Clp protease, proteolytic subunit compare
Atu4232 -1.7 -2.8 GntR family transcriptional regulator compare
Atu0977 -1.7 -2.0 serine protease DO-like protease compare
Atu3121 -1.7 -0.9 cold shock protein compare
Atu1810 -1.7 -0.4 hypothetical protein compare
Atu0784 -1.7 -1.6 hypothetical protein compare
Atu2555 -1.7 -2.7 L-lysine 2,3-aminomutase compare
Atu2264 -1.7 -6.1 2-isopropylmalate synthase compare
Atu3604 -1.7 -2.0 hypoxanthine phosphoribosyltransferase compare
Atu0142 -1.6 -0.8 cytochrome o ubiquinol oxidase subunit II compare
Atu0141 -1.6 -0.5 cytochrome O ubiquinol oxidase subunit I compare
Atu0769 -1.6 -0.6 protoheme IX farnesyltransferase compare
Atu0354 -1.6 -1.0 ferric uptake regulator compare
Atu0421 -1.6 -1.0 ABC transporter, membrane spanning protein compare
Atu2718 -1.6 -4.2 homoserine O-succinyltransferase compare
Atu3608 -1.6 -2.8 hypothetical protein compare
Atu3739 -1.6 -1.9 phosphoglycerate kinase compare
Atu0400 -1.6 -1.8 orotate phosphoribosyltransferase compare
Atu0781 -1.6 -2.6 hypothetical protein compare
Atu0189 -1.6 -0.5 ABC transporter, membrane spanning protein (peptide) compare
Atu0101 -1.5 -2.4 cytochrome c compare
Atu0749 -1.5 -1.7 biotin synthesis BioY protein compare
Atu1803 -1.5 -2.5 cold shock protein compare
Atu8138 -1.5 -0.7 hypothetical protein compare
Atu2057 -1.5 -1.0 DNA helicase II compare
Atu0692 -1.5 -3.5 glutathione-regulated potassium-efflux system protein compare
Atu0432 -1.5 -3.2 O-succinylhomoserine sulfhydrylase compare
Atu1701 -1.5 -1.2 protein-L-isoaspartate O-methyltransferase compare
Atu1592 -1.5 -2.5 hypothetical protein compare
Atu2799 -1.5 -2.6 precorrin-6x reductase compare
Atu2554 -1.5 -1.1 lysyl-tRNA synthetase compare
Atu0744 -1.5 -1.8 hypothetical protein compare
Atu1588 -1.5 -4.0 homoserine dehydrogenase compare
Atu0062 -1.5 -4.3 transcriptional regulator, ROK family compare
Atu0687 -1.5 -1.2 hypothetical protein compare
Atu2036 -1.5 -6.7 acetolactate synthase III, large subunit compare
Atu2442 -1.5 -1.4 hypothetical protein compare
Atu2349 -1.5 -0.9 hypothetical protein compare
Atu0999 -1.5 -1.0 magnesium transport protein compare
Atu1344 -1.4 -1.2 hypothetical protein compare
Atu0601 -1.4 -5.5 oxidoreductase compare
Atu0099 -1.4 -3.3 prephenate dehydratase compare
Atu3999 -1.4 -1.2 dithiobiotin synthetase compare
Atu0647 -1.4 -4.0 phosphoribosylamine--glycine ligase compare
Atu2286 -1.4 -0.9 hypothetical protein compare
Atu4502 -1.4 -3.8 cobalamin synthesis protein compare
Atu3750 -1.4 -1.7 thiamine-phosphate pyrophosphorylase compare
Atu3634 -1.4 -1.8 penicillin-binding protein dacf precursor compare
Atu2432 -1.4 -1.1 hypothetical protein compare
Atu3697 -1.4 -2.3 ATP-dependent protease LA 2 compare
Atu4618 -1.4 -3.0 dTDP-rhamnose-3,5-epimerase compare
Atu1021 -1.4 -1.3 outer membrane protein compare
Atu1417 -1.4 -3.9 enoyl-CoA hydratase compare
Atu0477 -1.4 -1.1 hypothetical protein compare
Atu4077 -1.4 -4.8 glycogen branching protein compare
Atu1687 -1.3 -3.8 anthranilate phosphoribosyltransferase compare
Atu2685 -1.3 -7.5 aconitate hydratase compare
Atu0551 -1.3 -2.4 flagellar protein FLGA precursor compare
Atu3727 -1.3 -2.1 hypothetical protein compare
Atu2791 -1.3 -3.3 3-isopropylmalate dehydrogenase compare
Atu4019 -1.3 -3.9 two component response regulator compare
Atu0149 -1.3 -2.1 enoyl-(acyl-carrier-protein) reductase compare
Atu0824 -1.3 -0.7 hypothetical protein compare
Atu2710 -1.3 -0.9 hypothetical protein compare
Atu4753 -1.3 -2.9 amino acid ABC transporter permease compare
Atu5430 -1.3 -0.7 hypothetical protein compare
Atu0025 -1.3 -1.1 hypothetical protein compare
Atu1902 -1.3 -3.3 transketolase compare
Atu2379 -1.3 -2.9 phosphomannomutase compare
Atu2155 -1.3 -6.3 methionine synthase compare
Atu3885 -1.3 -3.8 inositol monophosphatase compare
Atu3018 -1.3 -3.0 hypothetical protein compare
Atu3335 -1.3 -3.6 3-methyladenine DNA glycosylase compare
Atu1577 -1.3 -2.8 ABC transporter, substrate binding protein (amino acid) compare
Atu1099 -1.3 -2.3 hypothetical protein compare
Atu4425 -1.3 -2.8 inosine-uridine preferring nucleoside hydrolase compare
Atu1967 -1.3 -1.7 hypothetical protein compare
Atu2052 -1.3 -1.9 hypothetical protein compare
Atu0923 -1.2 -1.6 hypothetical protein compare
Atu0767 -1.2 -3.2 cytochrome c oxidase subunit II compare
Atu3331 -1.2 -2.0 hypothetical protein compare
Atu4364 -1.2 -2.7 LacI family transcriptional regulator compare
Atu8144 -1.2 -1.2 hypothetical protein compare
Atu4538 -1.2 -5.6 3-carboxy-cis,cis-muconate cycloisomerase compare
Atu1527 -1.2 -1.8 nitrogen fixation protein FixS compare
Atu0502 -1.2 -2.8 acetyl-CoA acetyltransferase compare
Atu2163 -1.2 -0.7 hypothetical protein compare
Atu2137 -1.2 -3.3 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct in Agrobacterium fabrum C58

For in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct across organisms