Experiment set18S375 for Agrobacterium fabrum C58

Compare to:

Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct

200 most important genes:

  gene name fitness t score description  
Atu2522 -8.1 -7.9 agrobacterium chromosomal virulence protein B compare
Atu0030 -6.2 -2.0 phosphocarrier protein HPr compare
Atu4618 -5.9 -14.3 dTDP-rhamnose-3,5-epimerase compare
Atu4615 -5.2 -10.5 glucose-1-phosphate thymidylyltransferase compare
Atu3353 -5.2 -13.0 mannose-1-phosphate guanylyltransferase compare
Atu6098 -5.2 -1.7 transcriptional regulator, HTH family compare
Atu0978 -4.9 -3.4 two component response regulator compare
Atu3311 -4.7 -10.5 phosphomannose isomerase compare
Atu2183 -4.5 -6.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4616 -4.3 -2.3 dTDP-4-dehydrorhamnose reductase compare
Atu4617 -4.3 -8.0 dTDP-D-glucose-4,6-dehydratase compare
Atu2274 -4.1 -11.8 cation efflux system protein compare
Atu1030 -4.1 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1359 -3.6 -1.6 dnaK deletion suppressor protein compare
Atu2521 -3.6 -15.7 Protein regulated by acid pH compare
Atu0041 -3.6 -3.1 glutamine amidotransferase compare
Atu2379 -3.6 -12.1 phosphomannomutase compare
Atu3598 -3.5 -1.9 thiol:disulfide interchange protein compare
Atu4613 -3.5 -11.8 glycosyltransferase compare
Atu1364 -3.5 -5.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0678 -3.4 -8.3 histidyl-tRNA synthetase compare
Atu0040 -3.4 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1446 -3.3 -2.8 two component response regulator compare
Atu0043 -3.2 -3.2 imidazoleglycerol-phosphate dehydratase compare
Atu3544 -3.2 -11.4 arsenical pump membrane protein compare
Atu0050 -3.2 -2.2 two component response regulator compare
Atu4610 -3.1 -11.6 sugar nucleotide epimerase/dehydratase compare
Atu1750 -2.9 -5.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu4166 -2.9 -3.6 UDP-glucose 4-epimerase compare
Atu3706 -2.8 -9.2 D-3-phosphoglycerate dehydrogenase compare
Atu3908 -2.8 -13.0 GntR family transcriptional regulator compare
Atu0876 -2.8 -2.5 superoxide dismutase compare
Atu0039 -2.8 -2.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu3732 -2.8 -13.0 hemolysin compare
Atu4614 -2.7 -3.7 glycosyltransferase compare
Atu2289 -2.7 -15.9 anthranilate synthase component I and II compare
Atu3727 -2.7 -6.3 hypothetical protein compare
Atu0051 -2.7 -1.9 two component sensor kinase compare
Atu0979 -2.7 -7.3 two component sensor kinase compare
Atu1644 -2.6 -3.5 hypothetical protein compare
Atu1645 -2.6 -6.6 ABC transporter, substrate binding protein compare
Atu0679 -2.6 -7.5 ATP phosphoribosyltransferase compare
Atu0031 -2.5 -1.1 PTS system, IIA component compare
Atu2040 -2.5 -6.0 phosphoserine phosphatase compare
Atu4711 -2.5 -8.5 two component sensor kinase compare
Atu0537 -2.5 -7.0 histidinol dehydrogenase compare
Atu1588 -2.5 -7.7 homoserine dehydrogenase compare
Atu1646 -2.4 -4.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu2207 -2.3 -2.8 two component sensor kinase compare
Atu4609 -2.3 -11.6 glycosyltransferase compare
Atu4608 -2.2 -10.1 hypothetical protein compare
Atu1354 -2.2 -1.4 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0769 -2.1 -1.3 protoheme IX farnesyltransferase compare
Atu0141 -2.1 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu0784 -2.1 -2.7 hypothetical protein compare
Atu0331 -2.1 -2.1 sigma-54 modulation protein compare
Atu0038 -2.1 -5.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0999 -2.1 -1.4 magnesium transport protein compare
Atu0189 -2.1 -1.1 ABC transporter, membrane spanning protein (peptide) compare
Atu4317 -2.0 -1.5 TetR family transcriptional regulator compare
Atu0434 -2.0 -2.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1163 -2.0 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1803 -2.0 -5.0 cold shock protein compare
Atu1619 -2.0 -1.8 protein-export membrane protein SECG compare
Atu8191 -1.9 -1.3 hypothetical protein compare
Atu1705 -1.9 -4.5 SEC-independent protein translocase protein compare
Atu3730 -1.9 -1.3 hypothetical protein compare
Atu1902 -1.9 -5.1 transketolase compare
Atu0692 -1.9 -8.1 glutathione-regulated potassium-efflux system protein compare
Atu1810 -1.9 -0.8 hypothetical protein compare
Atu4773 -1.9 -1.2 two component response regulator compare
Atu8095 -1.8 -8.0 hypothetical protein compare
Atu0601 -1.8 -8.9 oxidoreductase compare
Atu0368 -1.8 -3.7 tRNA pseudouridine synthase I compare
Atu1647 -1.8 -5.1 ABC transporter, membrane spanning protein compare
Atu1677 -1.7 -2.9 queuine tRNA-ribosyltransferase compare
Atu1468 -1.7 -5.7 hypothetical protein compare
Atu1417 -1.7 -4.6 enoyl-CoA hydratase compare
Atu3009 -1.7 -1.2 exopolysaccharide production protein compare
Atu1513 -1.6 -4.2 ABC excinuclease subunit A compare
Atu2832 -1.6 -3.9 tRNA modification GTPase compare
Atu1131 -1.6 -5.8 outer membrane protein compare
Atu0399 -1.6 -3.2 dihydroorotase compare
Atu1688 -1.6 -5.2 indole-3-glycerol-phosphate synthase compare
Atu3634 -1.6 -3.5 penicillin-binding protein dacf precursor compare
Atu2073 -1.6 -3.1 membrane protein compare
Atu3885 -1.5 -4.3 inositol monophosphatase compare
Atu0486 -1.5 -2.2 dihydroorotate dehydrogenase compare
Atu2685 -1.5 -9.6 aconitate hydratase compare
Atu3469 -1.5 -2.3 phosphoglyceromutase compare
Atu2052 -1.5 -2.9 hypothetical protein compare
Atu2036 -1.5 -8.3 acetolactate synthase III, large subunit compare
Atu0269 -1.5 -3.8 exodeoxyribonuclease VII large subunit compare
Atu2464 -1.4 -3.0 formyltetrahydrofolate deformylase compare
Atu2155 -1.4 -9.9 methionine synthase compare
Atu2730 -1.4 -10.3 beta (1-->2) glucan biosynthesis protein compare
Atu0142 -1.4 -2.0 cytochrome o ubiquinol oxidase subunit II compare
Atu1327 -1.4 -2.3 NADH-ubiquinone oxidoreductase compare
Atu2790 -1.4 -1.7 3-isopropylmalate dehydratase, small subunit compare
Atu1891 -1.4 -3.6 cobalamin biosynthesis protein compare
Atu4205 -1.3 -7.5 TetR family transcriptional regulator compare
Atu4323 -1.3 -5.8 ribitol 2-dehydrogenase compare
Atu0912 -1.3 -1.3 Na+/H+ antiporter compare
Atu2439 -1.3 -0.6 hypothetical protein compare
Atu2722 -1.3 -6.8 porin compare
Atu1874 -1.3 -2.0 RecA protein compare
Atu4187 -1.3 -1.3 tRNA-Met compare
Atu0602 -1.3 -6.1 glutamine synthetase compare
Atu0432 -1.3 -6.4 O-succinylhomoserine sulfhydrylase compare
Atu3744 -1.2 -7.5 ABC transporter permease compare
Atu0153 -1.2 -3.1 transcriptional regulator, Fur family compare
Atu3466 -1.2 -2.6 ArsR family transcriptional regulator compare
Atu2728 -1.2 -0.8 beta (1-->2) glucan export ATP-binding protein compare
Atu2113 -1.2 -1.8 N-acetylmuramoyl-L-alanine amidase compare
Atu3400 -1.2 -2.6 hypothetical protein compare
Atu0977 -1.2 -2.0 serine protease DO-like protease compare
Atu0400 -1.2 -2.8 orotate phosphoribosyltransferase compare
Atu0419 -1.2 -1.8 two component sensor kinase compare
Atu0026 -1.2 -0.8 hypothetical protein compare
Atu2554 -1.2 -1.9 lysyl-tRNA synthetase compare
Atu8167 -1.2 -4.5 putative transmembrane protein compare
Atu1056 -1.2 -3.2 hypothetical protein compare
Atu0401 -1.2 -4.8 fructokinase compare
Atu2718 -1.2 -4.0 homoserine O-succinyltransferase compare
Atu3219 -1.1 -6.7 dihydroxy-acid dehydratase compare
Atu0086 -1.1 -1.0 ribosome-binding factor A compare
Atu1793 -1.1 -5.2 phosphatidylcholine synthase compare
Atu3739 -1.1 -2.7 phosphoglycerate kinase compare
Atu2615 -1.1 -1.7 hypothetical protein compare
Atu0099 -1.1 -6.1 prephenate dehydratase compare
Atu3707 -1.1 -1.5 phosphoserine aminotransferase compare
Atu4077 -1.1 -4.9 glycogen branching protein compare
Atu0298 -1.1 -3.1 orotidine 5 compare
Atu0025 -1.1 -2.4 hypothetical protein compare
Atu2789 -1.1 -3.1 hypothetical protein compare
Atu0971 -1.1 -0.7 two component sensor kinase compare
Atu3613 -1.1 -2.7 hypothetical protein compare
Atu3517 -1.1 -3.6 acetyltransferase compare
Atu2650 -1.1 -6.9 glycerol-3-phosphate dehydrogenase compare
Atu2684 -1.1 -1.9 hypothetical protein compare
Atu2791 -1.1 -3.9 3-isopropylmalate dehydrogenase compare
Atu2831 -1.1 -3.4 glucose inhibited division protein A compare
Atu2264 -1.0 -4.6 2-isopropylmalate synthase compare
Atu0894 -1.0 -1.6 ABC transporter, membrane spanning protein compare
Atu2555 -1.0 -2.7 L-lysine 2,3-aminomutase compare
Atu1291 -1.0 -2.1 hypothetical protein compare
Atu0925 -0.9 -1.6 hypothetical protein compare
Atu0837 -0.9 -5.1 transcriptional regulator, MarR family compare
Atu1687 -0.9 -4.8 anthranilate phosphoribosyltransferase compare
Atu4530 -0.9 -5.0 TetR family transcriptional regulator compare
Atu0188 -0.9 -0.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0149 -0.9 -1.7 enoyl-(acyl-carrier-protein) reductase compare
Atu2798 -0.9 -3.1 precorrin-6y methyltransferase compare
Atu2692 -0.9 -1.9 intracellular septation protein compare
Atu3491 -0.9 -2.1 hypothetical protein compare
Atu1242 -0.9 -4.6 cytochrome oxidase assembly factor compare
Atu1447 -0.9 -1.3 two component sensor kinase compare
Atu0190 -0.9 -1.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1141 -0.9 -3.1 Phosphoribosylglycinamide synthetase compare
Atu2333 -0.9 -3.1 ATP-dependent RNA helicase compare
Atu2620 -0.9 -1.1 hypothetical protein compare
Atu2270 -0.9 -1.1 ATP-dependent Clp protease, proteolytic subunit compare
Atu2442 -0.9 -2.2 hypothetical protein compare
Atu4072 -0.9 -0.8 nodulation protein N compare
Atu4502 -0.9 -3.0 cobalamin synthesis protein compare
Atu2709 -0.9 -6.2 3-isopropylmalate dehydratase, large subunit compare
Atu3608 -0.9 -2.3 hypothetical protein compare
Atu4055 -0.9 -3.1 endo-1,3-1,4-beta-glycanase compare
Atu0237 -0.9 -2.2 hypothetical protein compare
Atu2237 -0.9 -3.2 cytochrome c1 compare
Atu0029 -0.8 -2.6 S-adenosylhomocysteine hydrolase compare
Atu2799 -0.8 -3.4 precorrin-6x reductase compare
Atu1530 -0.8 -5.0 nitrogen fixation protein FixG compare
Atu1308 -0.8 -3.6 aspartate carbamoyl transferase catalytic subunit compare
Atu1129 -0.8 -3.9 excinuclease ABC chain C compare
Atu1455 -0.8 -2.1 hypothetical protein compare
Atu0357 -0.8 -5.4 phosphate starvation inducible protein compare
Atu2787 -0.8 -0.9 hypothetical protein compare
Atu3609 -0.8 -2.8 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0689 -0.8 -4.3 ribosomal large subunit pseudouridine synthase B compare
Atu3248 -0.8 -2.9 cell division inhibitor compare
Atu0319 -0.8 -1.0 ubiquinone biosynthesis protein compare
Atu3429 -0.8 -1.0 hypothetical protein compare
Atu0926 -0.8 -2.8 hypothetical protein compare
Atu8159 -0.8 -1.4 hypothetical protein compare
Atu3663 -0.8 -1.0 hypothetical protein compare
Atu2616 -0.8 -1.8 hypothetical protein compare
Atu1380 -0.8 -4.4 zinc metallopeptidase compare
Atu1537 -0.8 -4.4 cytochrome-c oxidase, FixN chain compare
Atu1495 -0.8 -2.3 hypothetical protein compare
Atu1529 -0.8 -3.4 nitrogen fixation protein FixH compare
Atu1714 -0.8 -0.8 exonuclease III compare
Atu4477 -0.8 -3.7 TetR family transcriptional regulator compare
Atu3486 -0.8 -1.4 DeoR family transcriptional regulator compare
Atu1589 -0.8 -2.6 aminotransferase, class I compare
Atu0962 -0.8 -2.3 hypothetical protein compare
Atu0346 -0.8 -1.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2238 -0.7 -3.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2001 -0.7 -3.6 excinuclease ABC subunit B compare
Atu1357 -0.7 -4.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in in planta experiments

For in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct across organisms