Experiment set18S359 for Agrobacterium fabrum C58

Compare to:

Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct

200 most important genes:

  gene name fitness t score description  
Atu4614 -5.6 -8.5 glycosyltransferase compare
Atu3353 -5.3 -9.3 mannose-1-phosphate guanylyltransferase compare
Atu0036 -5.1 -1.9 hypothetical protein compare
Atu1359 -4.9 -1.1 dnaK deletion suppressor protein compare
Atu3311 -4.9 -11.9 phosphomannose isomerase compare
Atu2183 -4.6 -5.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0030 -4.4 -1.4 phosphocarrier protein HPr compare
Atu2067 -4.4 -0.9 hypothetical protein compare
Atu8054 -4.3 -0.9 hypothetical protein compare
Atu4613 -4.1 -12.3 glycosyltransferase compare
Atu0041 -4.1 -1.8 glutamine amidotransferase compare
Atu1760 -4.1 -0.9 hypothetical protein compare
Atu4616 -4.0 -1.5 dTDP-4-dehydrorhamnose reductase compare
Atu4617 -4.0 -6.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2522 -3.6 -10.0 agrobacterium chromosomal virulence protein B compare
Atu1030 -3.6 -1.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3544 -3.6 -11.1 arsenical pump membrane protein compare
Atu8095 -3.6 -7.1 hypothetical protein compare
Atu4618 -3.6 -7.4 dTDP-rhamnose-3,5-epimerase compare
Atu4072 -3.5 -1.3 nodulation protein N compare
Atu2379 -3.5 -8.0 phosphomannomutase compare
Atu1470 -3.4 -1.0 Camphor resistance protein compare
Atu2270 -3.4 -1.4 ATP-dependent Clp protease, proteolytic subunit compare
Atu0043 -3.3 -2.5 imidazoleglycerol-phosphate dehydratase compare
Atu1619 -3.3 -1.6 protein-export membrane protein SECG compare
Atu0040 -3.3 -1.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0912 -3.3 -1.0 Na+/H+ antiporter compare
Atu3598 -3.2 -1.2 thiol:disulfide interchange protein compare
Atu0886 -3.2 -1.0 hypothetical protein compare
Atu0537 -3.1 -7.7 histidinol dehydrogenase compare
Atu0692 -3.1 -7.8 glutathione-regulated potassium-efflux system protein compare
Atu3732 -3.1 -12.1 hemolysin compare
Atu4615 -3.0 -3.5 glucose-1-phosphate thymidylyltransferase compare
Atu0678 -3.0 -5.8 histidyl-tRNA synthetase compare
Atu8087 -3.0 -0.9 putative peptidoglycan binding protein compare
Atu0039 -3.0 -1.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu1683 -2.9 -1.7 hypothetical protein compare
Atu1739 -2.9 -2.3 permease compare
Atu4773 -2.8 -0.8 two component response regulator compare
Atu0978 -2.8 -3.6 two component response regulator compare
Atu1354 -2.8 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3706 -2.7 -7.9 D-3-phosphoglycerate dehydrogenase compare
Atu6098 -2.7 -1.0 transcriptional regulator, HTH family compare
Atu0876 -2.6 -1.5 superoxide dismutase compare
Atu3727 -2.6 -4.1 hypothetical protein compare
Atu1750 -2.6 -4.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu1447 -2.5 -1.8 two component sensor kinase compare
Atu0050 -2.5 -2.4 two component response regulator compare
Atu0679 -2.5 -5.6 ATP phosphoribosyltransferase compare
Atu3009 -2.4 -1.0 exopolysaccharide production protein compare
Atu1803 -2.4 -3.8 cold shock protein compare
Atu0031 -2.3 -0.7 PTS system, IIA component compare
Atu0354 -2.3 -1.2 ferric uptake regulator compare
Atu4166 -2.3 -1.9 UDP-glucose 4-epimerase compare
Atu0184 -2.3 -3.0 glucokinase compare
Atu0979 -2.3 -5.8 two component sensor kinase compare
Atu0051 -2.3 -2.2 two component sensor kinase compare
Atu1588 -2.3 -7.7 homoserine dehydrogenase compare
Atu1219 -2.3 -1.0 hypothetical protein compare
Atu2433 -2.2 -1.1 hypothetical protein compare
Atu5125 -2.2 -4.3 GntR family transcriptional regulator compare
Atu2831 -2.2 -4.1 glucose inhibited division protein A compare
Atu0894 -2.2 -1.7 ABC transporter, membrane spanning protein compare
Atu2125 -2.2 -1.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu1417 -2.1 -6.3 enoyl-CoA hydratase compare
Atu1131 -2.1 -4.5 outer membrane protein compare
Atu2036 -2.1 -9.9 acetolactate synthase III, large subunit compare
Atu2113 -2.1 -2.7 N-acetylmuramoyl-L-alanine amidase compare
Atu2057 -2.0 -1.1 DNA helicase II compare
Atu1077 -2.0 -2.8 DNA repair protein compare
Atu1904 -2.0 -3.4 transcriptional regulator compare
Atu2289 -2.0 -8.5 anthranilate synthase component I and II compare
Atu4610 -1.9 -5.3 sugar nucleotide epimerase/dehydratase compare
Atu8167 -1.9 -6.5 putative transmembrane protein compare
Atu0601 -1.9 -6.9 oxidoreductase compare
Atu0703 -1.9 -2.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu2521 -1.9 -5.2 Protein regulated by acid pH compare
Atu4609 -1.9 -7.1 glycosyltransferase compare
Atu3908 -1.9 -6.8 GntR family transcriptional regulator compare
Atu0141 -1.8 -0.7 cytochrome O ubiquinol oxidase subunit I compare
Atu2464 -1.8 -2.7 formyltetrahydrofolate deformylase compare
Atu2684 -1.8 -1.6 hypothetical protein compare
Atu1327 -1.8 -1.6 NADH-ubiquinone oxidoreductase compare
Atu4133 -1.8 -3.4 hypothetical protein compare
Atu0189 -1.8 -0.6 ABC transporter, membrane spanning protein (peptide) compare
Atu1364 -1.8 -2.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0769 -1.7 -0.7 protoheme IX farnesyltransferase compare
Atu1838 -1.7 -2.3 ABC transporter, substrate binding protein (amino acid) compare
Atu1844 -1.7 -1.5 Phosphoribosylformylglycinamidine synthetase compare
Atu0399 -1.7 -3.2 dihydroorotase compare
Atu8181 -1.7 -3.4 hypothetical protein compare
Atu3491 -1.7 -2.0 hypothetical protein compare
Atu3730 -1.7 -0.9 hypothetical protein compare
Atu2077 -1.7 -1.3 DNA polymerase III, epsilon subunit compare
Atu0298 -1.6 -3.4 orotidine 5 compare
Atu0999 -1.6 -1.1 magnesium transport protein compare
Atu4711 -1.6 -4.6 two component sensor kinase compare
Atu0422 -1.6 -1.7 ABC transporter, membrane spanning protein compare
Atu3613 -1.6 -3.7 hypothetical protein compare
Atu0941 -1.6 -0.7 hypothetical protein compare
Atu2083 -1.6 -2.0 DNA repair protein RecN compare
Atu1129 -1.6 -4.5 excinuclease ABC chain C compare
Atu4608 -1.6 -6.8 hypothetical protein compare
Atu3011 -1.6 -3.0 ArsR family transcriptional regulator compare
Atu2274 -1.6 -4.4 cation efflux system protein compare
Atu0017 -1.5 -2.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4887 -1.5 -3.5 hypothetical protein compare
Atu2620 -1.5 -1.0 hypothetical protein compare
Atu8047 -1.5 -4.3 hypothetical protein compare
Atu0434 -1.5 -1.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0388 -1.5 -5.4 two component sensor kinase compare
Atu2710 -1.5 -1.0 hypothetical protein compare
Atu4317 -1.5 -1.2 TetR family transcriptional regulator compare
Atu4099 -1.5 -4.2 hypothetical protein compare
Atu8023 -1.5 -1.0 hypothetical protein compare
Atu2722 -1.5 -5.3 porin compare
Atu8029 -1.5 -1.1 hypothetical protein compare
Atu0486 -1.4 -2.0 dihydroorotate dehydrogenase compare
Atu2640 -1.4 -2.3 hypothetical protein compare
Atu3249 -1.4 -4.0 septum formation inhibitor compare
Atu2207 -1.4 -2.1 two component sensor kinase compare
Atu2832 -1.4 -1.7 tRNA modification GTPase compare
Atu8202 -1.4 -3.1 hypothetical protein compare
Atu0923 -1.4 -2.9 hypothetical protein compare
Atu2692 -1.4 -2.6 intracellular septation protein compare
Atu1688 -1.4 -3.3 indole-3-glycerol-phosphate synthase compare
Atu0319 -1.4 -0.9 ubiquinone biosynthesis protein compare
Atu2209 -1.4 -2.3 pyrroline-5-carboxylate reductase compare
Atu0784 -1.4 -1.7 hypothetical protein compare
Atu0038 -1.3 -3.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2040 -1.3 -3.0 phosphoserine phosphatase compare
Atu1646 -1.3 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0602 -1.3 -4.0 glutamine synthetase compare
Atu1446 -1.3 -1.3 two component response regulator compare
Atu3623 -1.3 -2.4 DnaJ family molecular chaperone compare
Atu2343 -1.3 -3.5 acetyltransferase compare
Atu1110 -1.3 -1.3 cytosol aminopeptidase compare
Atu4894 -1.3 -5.6 transposase compare
Atu8088 -1.3 -1.4 hypothetical protein compare
Atu5057 -1.3 -1.3 hypothetical protein compare
Atu3486 -1.2 -1.2 DeoR family transcriptional regulator compare
Atu4173 -1.2 -1.5 phosphoenolpyruvate-protein phosphotransferase compare
Atu3015 -1.2 -3.5 hypothetical protein compare
Atu8118 -1.2 -4.7 putative universal stress protein compare
Atu3634 -1.2 -2.9 penicillin-binding protein dacf precursor compare
Atu1175 -1.2 -0.8 hypothetical protein compare
Atu1005 -1.2 -1.6 hypothetical protein compare
Atu3010 -1.2 -6.2 hypothetical protein compare
Atu1645 -1.2 -2.6 ABC transporter, substrate binding protein compare
Atu4148 -1.2 -4.0 UDP-glucuronic acid epimerase compare
Atu1076 -1.2 -2.4 colicin V production protein compare
Atu1182 -1.2 -0.9 hypothetical protein compare
Atu1163 -1.2 -0.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3014 -1.1 -1.4 hypothetical protein compare
Atu0153 -1.1 -3.2 transcriptional regulator, Fur family compare
Atu2439 -1.1 -0.3 hypothetical protein compare
Atu0025 -1.1 -1.6 hypothetical protein compare
Atu2824 -1.1 -2.0 hypothetical protein compare
Atu1468 -1.1 -4.7 hypothetical protein compare
Atu1019 -1.1 -1.5 hypothetical protein compare
Atu0331 -1.1 -0.9 sigma-54 modulation protein compare
Atu1592 -1.1 -2.8 hypothetical protein compare
Atu0105 -1.1 -1.1 hypothetical protein compare
Atu0269 -1.1 -1.9 exodeoxyribonuclease VII large subunit compare
Atu2685 -1.1 -6.4 aconitate hydratase compare
Atu2791 -1.1 -3.2 3-isopropylmalate dehydrogenase compare
Atu8052 -1.1 -1.0 hypothetical protein compare
Atu1099 -1.1 -2.2 hypothetical protein compare
Atu3299 -1.1 -1.6 hypothetical protein compare
Atu1705 -1.1 -3.8 SEC-independent protein translocase protein compare
Atu2616 -1.1 -0.7 hypothetical protein compare
Atu4893 -1.1 -3.3 hypothetical protein compare
Atu2787 -1.1 -0.7 hypothetical protein compare
Atu1952 -1.1 -0.8 hypothetical protein compare
Atu1677 -1.1 -1.8 queuine tRNA-ribosyltransferase compare
Atu2462 -1.1 -1.7 hypothetical protein compare
Atu4040 -1.1 -1.9 hypothetical protein compare
Atu1581 -1.0 -1.0 hypothetical protein compare
Atu5106 -1.0 -2.4 DNA binding protein compare
Atu3885 -1.0 -3.9 inositol monophosphatase compare
Atu5470 -1.0 -1.2 hypothetical protein compare
Atu0119 -1.0 -0.7 hypothetical protein compare
Atu2802 -1.0 -4.0 precorrin-8X methylmutase compare
Atu5467 -1.0 -2.3 hypothetical protein compare
Atu0846 -1.0 -1.4 transcriptional regulator, MarR family compare
Atu1644 -1.0 -1.2 hypothetical protein compare
Atu1357 -1.0 -4.3 hypothetical protein compare
Atu0690 -1.0 -1.1 hypothetical protein compare
Atu4346 -1.0 -2.9 hypothetical protein compare
Atu1889 -1.0 -1.1 diacylglycerol kinase compare
Atu1874 -1.0 -1.1 RecA protein compare
Atu2059 -1.0 -2.6 transcriptional regulator, TetR family compare
Atu2073 -1.0 -1.3 membrane protein compare
Atu1308 -1.0 -2.3 aspartate carbamoyl transferase catalytic subunit compare
Atu1968 -1.0 -0.9 hypothetical protein compare
Atu2304 -1.0 -3.7 bacteroid development protein compare
Atu3315 -1.0 -1.4 UDP-glucose 4-epimerase compare
Atu4892 -1.0 -5.0 hypothetical protein compare
Atu1513 -1.0 -2.4 ABC excinuclease subunit A compare
Atu0201 -1.0 -1.1 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct in Agrobacterium fabrum C58

For in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct across organisms