Experiment set18S359 for Agrobacterium fabrum C58

Compare to:

Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct

200 most detrimental genes:

  gene name fitness t score description  
Atu2192 +3.2 5.5 hypothetical protein compare
Atu3423 +2.9 3.6 hypothetical protein compare
Atu0236 +2.4 6.8 hypothetical protein compare
Atu3183 +2.0 1.8 hypothetical protein compare
Atu1457 +1.5 1.8 hypothetical protein compare
Atu1535 +1.4 1.4 cytochrome c oxidase, FixQ chain compare
Atu0997 +1.4 2.9 hypothetical protein compare
Atu1550 +1.4 2.3 polypeptide deformylase compare
Atu8012 +1.2 1.6 hypothetical protein compare
Atu0562 +1.2 2.7 flagellar motor switch protein FliN compare
Atu1685 +1.1 1.2 hypothetical protein compare
Atu5430 +1.1 1.1 hypothetical protein compare
Atu8126 +1.1 1.9 putative phage tail protein I compare
Atu8041 +1.1 2.4 hypothetical protein compare
Atu0135 +1.1 3.0 uracil phosphoribosyltransferase compare
Atu0842 +1.0 1.4 hypothetical protein compare
Atu2657 +1.0 2.0 hypothetical protein compare
Atu1566 +1.0 1.0 hypothetical protein compare
Atu0888 +1.0 4.3 transcriptional regulator, MerR family compare
Atu1836 +1.0 1.6 hypothetical protein compare
Atu0585 +1.0 1.6 hypothetical protein compare
Atu0892 +1.0 3.4 hypothetical protein compare
Atu0815 +0.9 2.8 hypothetical protein compare
Atu3604 +0.9 2.4 hypoxanthine phosphoribosyltransferase compare
Atu4744 +0.9 2.6 sugar ABC transporter substrate-binding protein compare
Atu5513 +0.9 1.7 cold shock protein compare
Atu2478 +0.9 2.0 hypothetical protein compare
Atu0572 +0.9 1.1 hypothetical protein compare
Atu0413 +0.9 1.6 stress induced protein compare
Atu0966 +0.9 1.2 hypothetical protein compare
Atu1213 +0.9 1.1 hypothetical protein compare
Atu0953 +0.9 0.6 hypothetical protein compare
Atu0107 +0.9 2.2 hypothetical protein compare
Atu3246 +0.9 2.5 amino acid ABC transporter substrate-binding protein compare
Atu0115 +0.9 0.7 hypothetical protein compare
Atu1608 +0.8 2.4 hypothetical protein compare
Atu1220 +0.8 2.6 methylated-DNA--protein-cysteine methyltransferase compare
Atu1527 +0.8 0.5 nitrogen fixation protein FixS compare
Atu2475 +0.8 2.2 ABC transporter, membrane spanning protein compare
Atu3648 +0.8 2.1 hypothetical protein compare
Atu8135 +0.8 2.0 hypothetical protein compare
Atu1676 +0.8 3.4 para-aminobenzoate synthase component I compare
Atu2034 +0.8 2.4 transcriptional regulator, ArsR family compare
Atu5511 +0.8 1.4 hypothetical protein compare
Atu8082 +0.8 1.2 hypothetical protein compare
Atu3036 +0.8 2.1 dipeptide ABC transporter permease compare
Atu0106 +0.8 1.7 cold shock protein compare
Atu0458 +0.8 1.9 hypothetical protein compare
Atu0280 +0.8 1.6 hypothetical protein compare
Atu0464 +0.8 2.4 hypothetical protein compare
Atu2593 +0.8 1.9 copper homeostasis protein compare
Atu6149 +0.8 2.6 hypothetical protein compare
Atu4469 +0.8 1.9 iron ABC transporter permease compare
Atu3614 +0.8 4.4 glyoxalase II compare
Atu4838 +0.8 2.1 outer membrane lipoprotein compare
Atu8133 +0.8 1.3 hypothetical protein compare
Atu0845 +0.8 1.4 hypothetical protein compare
Atu4197 +0.8 2.1 hypothetical protein compare
Atu4215 +0.8 1.9 cell division protein compare
Atu8022 +0.7 2.0 hypothetical protein compare
Atu2235 +0.7 0.7 hypothetical protein compare
Atu3062 +0.7 2.4 LacI family transcriptional regulator compare
Atu3039 +0.7 2.9 hydantoinase beta subunit-like protein compare
Atu3045 +0.7 2.8 hypothetical protein compare
Atu1455 +0.7 1.7 hypothetical protein compare
Atu0795 +0.7 1.3 hypothetical protein compare
Atu8025 +0.7 0.7 hypothetical protein compare
Atu3064 +0.7 1.6 ABC transporter permease compare
Atu8039 +0.7 1.3 hypothetical protein compare
Atu1810 +0.7 0.4 hypothetical protein compare
Atu1042 +0.7 1.2 hypothetical protein compare
Atu8185 +0.7 1.9 hypothetical protein compare
Atu2441 +0.7 1.2 RNA methylase compare
Atu2702 +0.7 3.2 hypothetical protein compare
Atu4588 +0.7 1.8 sodium bile acid symporter family protein compare
Atu2176 +0.7 2.9 hypothetical protein compare
Atu1846 +0.7 0.7 hypothetical protein compare
Atu2236 +0.7 1.3 adenine phosphoribosyltransferase compare
Atu2794 +0.7 1.4 uroporphyrin-III C-methyltransferase compare
Atu1722 +0.7 1.5 hypothetical protein compare
Atu0295 +0.7 0.9 hypothetical protein compare
Atu2357 +0.7 2.3 hypothetical protein compare
Atu1207 +0.7 3.1 GGDEF family protein compare
Atu8187 +0.7 1.8 hypothetical protein compare
Atu3050 +0.7 3.0 AgaE protein compare
Atu3095 +0.7 1.7 hypothetical protein compare
Atu1184 +0.7 1.0 hypothetical protein compare
Atu1233 +0.7 1.3 hypothetical protein compare
Atu1682 +0.7 1.3 hypothetical protein compare
Atu8034 +0.7 1.0 hypothetical protein compare
Atu3497 +0.7 0.9 hypothetical protein compare
Atu4641 +0.7 0.6 LysR family transcriptional regulator compare
Atu3030 +0.7 0.9 hypothetical protein compare
Atu1501 +0.6 2.3 hypothetical protein compare
Atu0786 +0.6 1.6 peptidase, family M16 compare
Atu5192 +0.6 1.8 hypothetical protein compare
Atu3031 +0.6 0.7 hypothetical protein compare
Atu0566 +0.6 0.9 hypothetical protein compare
Atu1737 +0.6 0.8 hypothetical protein compare
Atu2442 +0.6 0.8 hypothetical protein compare
Atu0556 +0.6 1.4 hypothetical protein compare
Atu0169 +0.6 1.8 hypothetical protein compare
Atu3063 +0.6 1.4 ABC transporter permease compare
Atu2712 +0.6 2.0 ABC transporter, nucleotide binding/ATPase protein (thiamine) compare
Atu8156 +0.6 1.5 hypothetical protein compare
Atu1785 +0.6 2.5 acetyltransferase compare
Atu2197 +0.6 1.3 hypothetical protein compare
Atu4073 +0.6 1.9 glycogen debranching protein compare
Atu8125 +0.6 3.1 hypothetical protein compare
Atu3539 +0.6 1.3 hypothetical protein compare
Atu0819 +0.6 1.6 hypothetical protein compare
Atu3215 +0.6 1.6 oligopeptide ABC transporter ATPase compare
Atu3286 +0.6 1.7 ABC transporter permease compare
Atu5437 +0.6 1.5 hypothetical protein compare
Atu3911 +0.6 1.4 hypothetical protein compare
Atu0117 +0.6 2.0 hypothetical protein compare
Atu2060 +0.6 2.1 ABC transporter, substrate binding protein (glycine betaine) compare
Atu2276 +0.6 2.8 ABC transporter, substrate binding protein (branched chain amino acid) compare
Atu0959 +0.6 1.8 hypothetical protein compare
Atu0936 +0.6 1.3 methyltransferase compare
Atu3674 +0.6 1.7 hypothetical protein compare
Atu0694 +0.6 2.6 inositol monophosphatase family protein compare
Atu1558 +0.6 2.7 permease compare
Atu5438 +0.6 1.3 3-oxoacyl-ACP reductase compare
Atu4472 +0.6 1.7 hypothetical protein compare
Atu3387 +0.6 0.9 sigma factor compare
Atu0378 +0.6 1.3 hydrolase compare
Atu3597 +0.6 1.9 3-hydroxybutyryl-CoA dehydrogenase compare
Atu0580 +0.6 0.8 flagellar biosynthetic protein compare
Atu0116 +0.6 2.8 hypothetical protein compare
Atu5489 +0.6 1.1 hypothetical protein compare
Atu4834 +0.6 3.4 6-phosphogluconate dehydrogenase compare
Atu1326 +0.6 1.0 acetyltransferase compare
Atu1524 +0.6 3.2 hypothetical protein compare
Atu1150 +0.6 1.5 hypothetical protein compare
Atu0573 +0.6 1.9 transcriptional regulator compare
Atu0532 +0.6 1.7 hypothetical protein compare
Atu0200 +0.6 1.4 hypothetical protein compare
Atu4341 +0.6 1.6 hypothetical protein compare
Atu4831 +0.6 1.9 hypothetical protein compare
Atu2511 +0.6 2.4 D-alanine aminotransferase compare
Atu8145 +0.6 1.7 hypothetical protein compare
Atu4347 +0.6 2.3 hypothetical protein compare
Atu2617 +0.6 1.5 chemotaxis protein compare
Atu5440 +0.6 1.6 hypothetical protein compare
Atu1043 +0.6 2.1 hypothetical protein compare
Atu2234 +0.6 1.0 hypothetical protein compare
Atu4677 +0.6 0.7 hypothetical protein compare
Atu0882 +0.6 2.3 hypothetical protein compare
Atu2683 +0.6 0.8 hypothetical protein compare
Atu3506 +0.6 1.7 hypothetical protein compare
Atu2474 +0.6 1.6 ABC transporter, membrane spanning protein compare
Atu3092 +0.6 1.7 hypothetical protein compare
Atu0790 +0.6 1.7 hypothetical protein compare
Atu2201 +0.6 1.0 hydrolase compare
Atu0907 +0.6 1.0 Phosphinothricin acetyltransferase compare
Atu5421 +0.6 2.2 ABC transporter membrane spanning protein (putrescine) compare
Atu8089 +0.6 2.4 hypothetical protein compare
Atu0779 +0.6 1.6 peroxiredoxin compare
Atu2630 +0.5 1.8 hypothetical protein compare
Atu0194 +0.5 3.4 oxidoreductase compare
Atu1098 +0.5 1.6 hypothetical protein compare
Atu0812 +0.5 0.9 hypothetical protein compare
Atu3690 +0.5 1.8 iron (III ABC transporter permease dicitrate ABC transporter permease compare
Atu5166 +0.5 0.8 type IV secretion protein AvhB5 compare
Atu0544 +0.5 0.7 hypothetical protein compare
Atu0781 +0.5 0.8 hypothetical protein compare
Atu0887 +0.5 0.7 acetyltransferase compare
Atu2063 +0.5 0.4 hypothetical protein compare
Atu2708 +0.5 2.9 MFS permease compare
Atu1439 +0.5 0.6 hypothetical protein compare
Atu3835 +0.5 2.7 hypothetical protein compare
Atu4258 +0.5 2.8 oligopeptide ABC transporter permease compare
Atu0224 +0.5 1.8 components of type IV pilus, pilin subunit compare
Atu2069 +0.5 1.1 hypothetical protein compare
Atu4508 +0.5 2.5 oxoreductase compare
Atu4306 +0.5 1.2 two component response regulator compare
Atu3468 +0.5 0.3 hypothetical protein compare
Atu8159 +0.5 1.2 hypothetical protein compare
Atu1203 +0.5 0.8 hypothetical protein compare
Atu3421 +0.5 1.7 hypothetical protein compare
Atu2435 +0.5 3.1 acetyltranferase compare
Atu2387 +0.5 1.2 NTP pyrophosphohydrolase, MutT family compare
Atu1427 +0.5 2.4 hypothetical protein compare
Atu2634 +0.5 0.7 hypothetical protein compare
Atu8092 +0.5 1.9 hypothetical protein compare
Atu6188 +0.5 2.3 virA/G regulated protein compare
Atu0231 +0.5 1.4 GMP synthase compare
Atu1625 +0.5 1.6 methyltransferase compare
Atu0283 +0.5 1.7 hypothetical protein compare
Atu4471 +0.5 2.2 ABC transporter substrate-binding protein compare
Atu0381 +0.5 1.8 hypothetical protein compare
Atu1801 +0.5 1.2 hypothetical protein compare
Atu1539 +0.5 1.8 sulfate permease compare
Atu4816 +0.5 2.9 glycosyltransferase compare
Atu1102 +0.5 1.5 hypothetical protein compare
Atu4488 +0.5 1.8 ABC transporter permease compare
Atu1697 +0.5 2.5 MFS permease compare
Atu4138 +0.5 1.4 oxidoreductase compare
Atu5413 +0.5 2.2 ABC transporter membrane spanning protein compare


Specific Phenotypes

For 1 genes in this experiment

For in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct in Agrobacterium fabrum C58

For in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct across organisms