Experiment set18S331 for Agrobacterium fabrum C58

Compare to:

LB_Sorghum Rtx 430

200 most important genes:

  gene name fitness t score description  
Atu8095 -2.7 -7.9 hypothetical protein compare
Atu3598 -2.5 -1.9 thiol:disulfide interchange protein compare
Atu4072 -2.4 -2.3 nodulation protein N compare
Atu0331 -2.3 -3.0 sigma-54 modulation protein compare
Atu0692 -2.2 -9.4 glutathione-regulated potassium-efflux system protein compare
Atu0999 -2.0 -1.9 magnesium transport protein compare
Atu0141 -1.9 -1.3 cytochrome O ubiquinol oxidase subunit I compare
Atu0189 -1.9 -1.2 ABC transporter, membrane spanning protein (peptide) compare
Atu0690 -1.9 -2.2 hypothetical protein compare
Atu1810 -1.9 -1.2 hypothetical protein compare
Atu0977 -1.8 -3.6 serine protease DO-like protease compare
Atu2684 -1.7 -2.9 hypothetical protein compare
Atu0225 -1.7 -1.6 hypothetical protein compare
Atu1359 -1.6 -1.9 dnaK deletion suppressor protein compare
Atu1803 -1.6 -4.9 cold shock protein compare
Atu0031 -1.5 -1.2 PTS system, IIA component compare
Atu0486 -1.5 -3.9 dihydroorotate dehydrogenase compare
Atu3727 -1.5 -5.3 hypothetical protein compare
Atu3008 -1.5 -1.6 hypothetical protein compare
Atu4614 -1.5 -6.9 glycosyltransferase compare
Atu1513 -1.5 -3.8 ABC excinuclease subunit A compare
Atu0399 -1.5 -4.2 dihydroorotase compare
Atu2183 -1.4 -8.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4618 -1.4 -9.2 dTDP-rhamnose-3,5-epimerase compare
Atu0030 -1.4 -2.3 phosphocarrier protein HPr compare
Atu1327 -1.4 -3.4 NADH-ubiquinone oxidoreductase compare
Atu4613 -1.4 -9.8 glycosyltransferase compare
Atu1364 -1.4 -4.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0784 -1.4 -2.8 hypothetical protein compare
Atu1714 -1.3 -1.6 exonuclease III compare
Atu4205 -1.3 -7.9 TetR family transcriptional regulator compare
Atu4615 -1.3 -9.0 glucose-1-phosphate thymidylyltransferase compare
Atu3353 -1.3 -9.1 mannose-1-phosphate guanylyltransferase compare
Atu4617 -1.3 -9.1 dTDP-D-glucose-4,6-dehydratase compare
Atu2464 -1.3 -2.2 formyltetrahydrofolate deformylase compare
Atu1774 -1.3 -1.2 ABC transporter, substrate binding protein (peptide) compare
Atu4889 -1.3 -6.8 hypothetical protein compare
Atu4887 -1.3 -6.6 hypothetical protein compare
Atu2057 -1.2 -1.6 DNA helicase II compare
Atu3009 -1.2 -1.3 exopolysaccharide production protein compare
Atu2439 -1.2 -0.7 hypothetical protein compare
Atu0142 -1.2 -1.9 cytochrome o ubiquinol oxidase subunit II compare
Atu3015 -1.2 -5.2 hypothetical protein compare
Atu0269 -1.2 -3.5 exodeoxyribonuclease VII large subunit compare
Atu0769 -1.1 -1.0 protoheme IX farnesyltransferase compare
Atu3730 -1.1 -1.3 hypothetical protein compare
Atu1667 -1.1 -1.9 hypothetical protein compare
Atu4892 -1.1 -8.7 hypothetical protein compare
Atu3016 -1.1 -6.4 phosphoglyceromutase compare
Atu0036 -1.1 -0.9 hypothetical protein compare
Atu3010 -1.1 -6.4 hypothetical protein compare
Atu0251 -1.1 -7.2 hypothetical protein compare
Atu8202 -1.1 -4.8 hypothetical protein compare
Atu4890 -1.1 -3.2 IS426 transposase compare
Atu2692 -1.1 -3.6 intracellular septation protein compare
Atu1739 -1.1 -1.8 permease compare
Atu0923 -1.1 -3.7 hypothetical protein compare
Atu4882 -1.1 -3.2 hypothetical protein compare
Atu2800 -1.1 -3.4 precorrin-3B C17-methyltransferase compare
Atu4893 -1.1 -5.8 hypothetical protein compare
Atu3013 -1.0 -4.9 hypothetical protein compare
Atu0602 -1.0 -6.2 glutamine synthetase compare
Atu3018 -1.0 -3.3 hypothetical protein compare
Atu1439 -1.0 -1.6 hypothetical protein compare
Atu0184 -1.0 -2.2 glucokinase compare
Atu3006 -1.0 -4.0 hypothetical protein compare
Atu2083 -1.0 -2.6 DNA repair protein RecN compare
Atu3311 -1.0 -8.2 phosphomannose isomerase compare
Atu0601 -1.0 -5.8 oxidoreductase compare
Atu2052 -1.0 -2.3 hypothetical protein compare
Atu0978 -1.0 -3.5 two component response regulator compare
Atu3011 -1.0 -4.1 ArsR family transcriptional regulator compare
Atu3517 -1.0 -3.8 acetyltransferase compare
Atu3014 -1.0 -2.6 hypothetical protein compare
Atu4317 -1.0 -2.0 TetR family transcriptional regulator compare
Atu8138 -1.0 -1.2 hypothetical protein compare
Atu4888 -0.9 -5.0 hypothetical protein compare
Atu2722 -0.9 -5.6 porin compare
Atu0971 -0.9 -0.9 two component sensor kinase compare
Atu2616 -0.9 -1.5 hypothetical protein compare
Atu0062 -0.9 -5.2 transcriptional regulator, ROK family compare
Atu1874 -0.9 -1.5 RecA protein compare
Atu1468 -0.9 -4.6 hypothetical protein compare
Atu0298 -0.9 -3.8 orotidine 5 compare
Atu0400 -0.9 -2.8 orotate phosphoribosyltransferase compare
Atu4894 -0.9 -4.9 transposase compare
Atu1129 -0.9 -4.5 excinuclease ABC chain C compare
Atu3019 -0.9 -5.3 hypothetical protein compare
Atu3005 -0.8 -1.4 hypothetical protein compare
Atu1099 -0.8 -2.7 hypothetical protein compare
Atu1447 -0.8 -2.0 two component sensor kinase compare
Atu2824 -0.8 -1.9 hypothetical protein compare
Atu2832 -0.8 -2.4 tRNA modification GTPase compare
Atu2067 -0.8 -1.0 hypothetical protein compare
Atu0894 -0.8 -1.3 ABC transporter, membrane spanning protein compare
Atu4880 -0.8 -6.0 AraC family transcriptional regulator compare
Atu0388 -0.8 -4.3 two component sensor kinase compare
Atu1685 -0.8 -1.2 hypothetical protein compare
Atu5164 -0.8 -1.1 type IV secretion protein AvhB3 compare
Atu3249 -0.8 -3.2 septum formation inhibitor compare
Atu1535 -0.8 -1.7 cytochrome c oxidase, FixQ chain compare
Atu3603 -0.8 -1.7 two component response regulator compare
Atu3759 -0.8 -1.5 hypothetical protein compare
Atu3023 -0.8 -5.8 sugar ABC transporter permease compare
Atu4881 -0.8 -4.9 hypothetical protein compare
Atu0044 -0.7 -4.0 heat shock protein hslV compare
Atu3001 -0.7 -1.4 hypothetical protein compare
Atu3021 -0.7 -5.1 sugar ABC transporter ATPase compare
Atu4446 -0.7 -6.0 hypothetical protein compare
Atu3754 -0.7 -3.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0677 -0.7 -1.5 hypothetical protein compare
Atu1793 -0.7 -3.7 phosphatidylcholine synthase compare
Atu3022 -0.7 -4.9 sugar ABC transporter permease compare
Atu2650 -0.7 -4.7 glycerol-3-phosphate dehydrogenase compare
Atu4773 -0.7 -1.0 two component response regulator compare
Atu4711 -0.7 -4.3 two component sensor kinase compare
Atu0920 -0.7 -3.0 hypothetical protein compare
Atu3698 -0.7 -1.7 thioredoxin compare
Atu4166 -0.7 -2.5 UDP-glucose 4-epimerase compare
Atu2554 -0.7 -1.4 lysyl-tRNA synthetase compare
Atu4053 -0.7 -1.6 succinoglycan biosynthesis protein compare
Atu4177 -0.7 -5.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2803 -0.7 -2.0 Cobalamin biosynthesis associated protein compare
Atu0368 -0.7 -2.9 tRNA pseudouridine synthase I compare
Atu2798 -0.7 -2.1 precorrin-6y methyltransferase compare
Atu4117 -0.7 -3.1 dipeptide ABC transporter ATPase compare
Atu0190 -0.7 -0.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2685 -0.7 -5.4 aconitate hydratase compare
Atu4879 -0.7 -4.3 hypothetical protein compare
Atu2041 -0.7 -1.3 acetyltransferase compare
Atu4884 -0.7 -2.6 hypothetical protein compare
Atu3017 -0.6 -1.4 phosphoglyceromutase compare
Atu1039 -0.6 -2.5 DNA repair protein RecO compare
Atu0979 -0.6 -2.8 two component sensor kinase compare
Atu2728 -0.6 -0.8 beta (1-->2) glucan export ATP-binding protein compare
Atu1308 -0.6 -3.5 aspartate carbamoyl transferase catalytic subunit compare
Atu0876 -0.6 -1.3 superoxide dismutase compare
Atu1380 -0.6 -3.8 zinc metallopeptidase compare
Atu2615 -0.6 -1.3 hypothetical protein compare
Atu4876 -0.6 -4.7 oxidoreductase compare
Atu0895 -0.6 -1.1 ABC transporter, substrate binding protein compare
Atu2640 -0.6 -1.7 hypothetical protein compare
Atu3732 -0.6 -4.7 hemolysin compare
Atu0070 -0.6 -3.6 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu3299 -0.6 -1.9 hypothetical protein compare
Atu4630 -0.6 -2.3 hypothetical protein compare
Atu2787 -0.6 -1.0 hypothetical protein compare
Atu8056 -0.6 -1.0 hypothetical protein compare
Atu3739 -0.6 -2.4 phosphoglycerate kinase compare
Atu3913 -0.6 -3.6 biotin carboxylase compare
Atu2432 -0.6 -1.6 hypothetical protein compare
Atu1701 -0.6 -1.5 protein-L-isoaspartate O-methyltransferase compare
Atu0912 -0.6 -0.9 Na+/H+ antiporter compare
Atu3910 -0.6 -2.3 LamB/YcsF family protein compare
Atu4406 -0.6 -1.4 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu8082 -0.6 -1.4 hypothetical protein compare
Atu1449 -0.6 -3.0 potassium uptake protein compare
Atu3496 -0.6 -1.7 hypothetical protein compare
Atu3912 -0.6 -3.9 hypothetical protein compare
Atu3248 -0.6 -2.9 cell division inhibitor compare
Atu2606 -0.6 -2.0 transcriptional regulator, GntR family compare
Atu1204 -0.6 -3.2 potassium uptake protein compare
Atu1470 -0.6 -0.7 Camphor resistance protein compare
Atu0780 -0.6 -3.0 hypothetical protein compare
Atu4671 -0.6 -2.0 response regulator compare
Atu1527 -0.5 -2.7 nitrogen fixation protein FixS compare
Atu3020 -0.5 -3.3 GntR family transcriptional regulator compare
Atu4342 -0.5 -2.2 hypothetical protein compare
Atu4407 -0.5 -2.5 periplasmic nitrate reductase, NapD protein compare
Atu4878 -0.5 -1.9 hypothetical protein compare
Atu1686 -0.5 -4.4 peptidyl-prolyl cis-trans isomerse D compare
Atu1075 -0.5 -3.4 amidophosphoribosyltransferase compare
Atu2710 -0.5 -1.1 hypothetical protein compare
Atu5160 -0.5 -1.8 transcriptional regulator protein compare
Atu4099 -0.5 -2.4 hypothetical protein compare
Atu0045 -0.5 -3.3 heat shock chaperone compare
Atu4540 -0.5 -1.8 protocatechuate 3,4-dioxygenase subunit beta compare
Atu3608 -0.5 -2.6 hypothetical protein compare
Atu3505 -0.5 -3.0 3-hydroxyisobutyryl-CoA hydrolase compare
Atu0051 -0.5 -1.3 two component sensor kinase compare
Atu0152 -0.5 -0.9 hypothetical protein compare
Atu4217 -0.5 -0.3 TetR family transcriptional regulator compare
Atu6131 -0.5 -2.6 TraR Antiactivator compare
Atu4877 -0.5 -3.8 short-chain dehydrogenase compare
Atu3755 -0.5 -1.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2239 -0.5 -2.1 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu5169 -0.5 -2.1 type IV secretion protein AvhB8 compare
Atu4873 -0.5 -2.7 TetR family transcriptional regulator compare
Atu8096 -0.5 -1.2 hypothetical protein compare
Atu0477 -0.5 -1.3 hypothetical protein compare
Atu3763 -0.5 -0.3 hypothetical protein compare
Atu1219 -0.5 -0.3 hypothetical protein compare
Atu0303 -0.5 -2.2 hypothetical protein compare
Atu1620 -0.5 -3.7 triosephosphate isomerase compare
Atu1592 -0.5 -2.3 hypothetical protein compare
Atu3898 -0.5 -3.5 DeoR family transcriptional regulator compare
Atu2304 -0.5 -3.6 bacteroid development protein compare
Atu8025 -0.5 -1.1 hypothetical protein compare
Atu8167 -0.5 -3.1 putative transmembrane protein compare
Atu0237 -0.5 -1.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_sorghum rtx 430 experiments

For lb_sorghum rtx 430 LB_Sorghum Rtx 430 across organisms