Experiment set18S327 for Agrobacterium fabrum C58

Compare to:

LB_Sorghum NK 300

200 most important genes:

  gene name fitness t score description  
Atu4616 -2.7 -2.5 dTDP-4-dehydrorhamnose reductase compare
Atu0050 -2.6 -2.6 two component response regulator compare
Atu8095 -2.6 -7.6 hypothetical protein compare
Atu1030 -2.6 -3.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4317 -2.4 -3.0 TetR family transcriptional regulator compare
Atu0692 -2.3 -11.9 glutathione-regulated potassium-efflux system protein compare
Atu0999 -2.2 -1.5 magnesium transport protein compare
Atu0141 -2.1 -1.4 cytochrome O ubiquinol oxidase subunit I compare
Atu1810 -2.0 -1.3 hypothetical protein compare
Atu3727 -2.0 -6.6 hypothetical protein compare
Atu1803 -2.0 -5.6 cold shock protein compare
Atu0051 -2.0 -2.9 two component sensor kinase compare
Atu3469 -1.9 -2.3 phosphoglyceromutase compare
Atu0399 -1.8 -4.8 dihydroorotase compare
Atu0071 -1.8 -9.0 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu6098 -1.8 -1.9 transcriptional regulator, HTH family compare
Atu0876 -1.8 -2.5 superoxide dismutase compare
Atu0784 -1.7 -2.8 hypothetical protein compare
Atu1163 -1.6 -1.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0486 -1.6 -4.4 dihydroorotate dehydrogenase compare
Atu1774 -1.6 -1.1 ABC transporter, substrate binding protein (peptide) compare
Atu0912 -1.5 -2.2 Na+/H+ antiporter compare
Atu0070 -1.5 -7.7 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu1468 -1.4 -6.6 hypothetical protein compare
Atu0269 -1.4 -4.3 exodeoxyribonuclease VII large subunit compare
Atu4614 -1.4 -8.1 glycosyltransferase compare
Atu3010 -1.4 -8.7 hypothetical protein compare
Atu4617 -1.4 -7.8 dTDP-D-glucose-4,6-dehydratase compare
Atu3353 -1.4 -9.6 mannose-1-phosphate guanylyltransferase compare
Atu4618 -1.4 -9.6 dTDP-rhamnose-3,5-epimerase compare
Atu2183 -1.4 -7.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3006 -1.4 -5.1 hypothetical protein compare
Atu1874 -1.4 -2.2 RecA protein compare
Atu3598 -1.4 -1.5 thiol:disulfide interchange protein compare
Atu0030 -1.4 -2.5 phosphocarrier protein HPr compare
Atu4205 -1.3 -8.9 TetR family transcriptional regulator compare
Atu4072 -1.3 -1.6 nodulation protein N compare
Atu0769 -1.3 -1.2 protoheme IX farnesyltransferase compare
Atu4882 -1.3 -3.9 hypothetical protein compare
Atu1570 -1.3 -1.5 hypothetical protein compare
Atu3018 -1.3 -5.0 hypothetical protein compare
Atu3012 -1.3 -1.7 hypothetical protein compare
Atu0368 -1.2 -4.9 tRNA pseudouridine synthase I compare
Atu4613 -1.2 -9.0 glycosyltransferase compare
Atu4893 -1.2 -6.7 hypothetical protein compare
Atu0184 -1.2 -4.0 glucokinase compare
Atu4892 -1.2 -9.9 hypothetical protein compare
Atu2464 -1.2 -2.8 formyltetrahydrofolate deformylase compare
Atu1364 -1.2 -4.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3013 -1.2 -3.8 hypothetical protein compare
Atu4615 -1.2 -6.6 glucose-1-phosphate thymidylyltransferase compare
Atu4887 -1.2 -5.4 hypothetical protein compare
Atu4890 -1.2 -3.6 IS426 transposase compare
Atu4884 -1.2 -4.7 hypothetical protein compare
Atu1327 -1.2 -3.5 NADH-ubiquinone oxidoreductase compare
Atu3311 -1.1 -9.2 phosphomannose isomerase compare
Atu0361 -1.1 -1.5 transcriptional regulator compare
Atu1446 -1.1 -2.2 two component response regulator compare
Atu3011 -1.1 -3.9 ArsR family transcriptional regulator compare
Atu4881 -1.1 -6.7 hypothetical protein compare
Atu0400 -1.1 -3.6 orotate phosphoribosyltransferase compare
Atu2824 -1.1 -2.5 hypothetical protein compare
Atu0251 -1.1 -8.3 hypothetical protein compare
Atu0036 -1.1 -1.2 hypothetical protein compare
Atu1129 -1.1 -4.9 excinuclease ABC chain C compare
Atu2692 -1.1 -2.8 intracellular septation protein compare
Atu2616 -1.1 -1.8 hypothetical protein compare
Atu0894 -1.0 -1.7 ABC transporter, membrane spanning protein compare
Atu0190 -1.0 -0.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3015 -1.0 -5.2 hypothetical protein compare
Atu4889 -1.0 -5.7 hypothetical protein compare
Atu3014 -1.0 -3.7 hypothetical protein compare
Atu1077 -1.0 -2.8 DNA repair protein compare
Atu0978 -1.0 -3.2 two component response regulator compare
Atu8191 -1.0 -1.6 hypothetical protein compare
Atu3712 -1.0 -1.8 hypothetical protein compare
Atu4888 -1.0 -4.9 hypothetical protein compare
Atu1099 -1.0 -3.4 hypothetical protein compare
Atu1204 -1.0 -4.5 potassium uptake protein compare
Atu0189 -1.0 -0.9 ABC transporter, membrane spanning protein (peptide) compare
Atu8202 -1.0 -4.2 hypothetical protein compare
Atu0298 -1.0 -4.4 orotidine 5 compare
Atu0331 -1.0 -2.0 sigma-54 modulation protein compare
Atu0602 -1.0 -6.4 glutamine synthetase compare
Atu3009 -1.0 -1.1 exopolysaccharide production protein compare
Atu1354 -1.0 -1.4 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3613 -1.0 -3.9 hypothetical protein compare
Atu2083 -0.9 -2.8 DNA repair protein RecN compare
Atu0045 -0.9 -5.9 heat shock chaperone compare
Atu2073 -0.9 -2.4 membrane protein compare
Atu3517 -0.9 -3.8 acetyltransferase compare
Atu2832 -0.9 -2.8 tRNA modification GTPase compare
Atu3248 -0.9 -4.0 cell division inhibitor compare
Atu4711 -0.9 -4.0 two component sensor kinase compare
Atu3017 -0.9 -1.9 phosphoglyceromutase compare
Atu1449 -0.9 -4.6 potassium uptake protein compare
Atu3249 -0.8 -3.8 septum formation inhibitor compare
Atu2640 -0.8 -2.0 hypothetical protein compare
Atu0601 -0.8 -5.2 oxidoreductase compare
Atu3019 -0.8 -5.3 hypothetical protein compare
Atu2728 -0.8 -1.1 beta (1-->2) glucan export ATP-binding protein compare
Atu2684 -0.8 -2.0 hypothetical protein compare
Atu0923 -0.8 -3.5 hypothetical protein compare
Atu3021 -0.8 -5.4 sugar ABC transporter ATPase compare
Atu4878 -0.8 -3.2 hypothetical protein compare
Atu2125 -0.8 -1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu1573 -0.8 -1.6 hypothetical protein compare
Atu4223 -0.8 -2.3 sarcosine oxidase delta subunit compare
Atu1739 -0.8 -1.9 permease compare
Atu3016 -0.8 -3.9 phosphoglyceromutase compare
Atu3755 -0.8 -3.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2615 -0.8 -1.7 hypothetical protein compare
Atu1714 -0.8 -1.2 exonuclease III compare
Atu1308 -0.8 -4.2 aspartate carbamoyl transferase catalytic subunit compare
Atu0535 -0.7 -3.2 hypothetical protein compare
Atu2787 -0.7 -1.1 hypothetical protein compare
Atu4166 -0.7 -2.4 UDP-glucose 4-epimerase compare
Atu1793 -0.7 -3.7 phosphatidylcholine synthase compare
Atu8025 -0.7 -1.8 hypothetical protein compare
Atu3022 -0.7 -4.9 sugar ABC transporter permease compare
Atu4161 -0.7 -1.4 hypothetical protein compare
Atu1667 -0.7 -1.5 hypothetical protein compare
Atu1028 -0.7 -1.8 hypothetical protein compare
Atu1677 -0.7 -1.9 queuine tRNA-ribosyltransferase compare
Atu0977 -0.7 -2.1 serine protease DO-like protease compare
Atu3023 -0.7 -4.8 sugar ABC transporter permease compare
Atu0388 -0.7 -3.9 two component sensor kinase compare
Atu0026 -0.7 -0.8 hypothetical protein compare
Atu1359 -0.7 -1.1 dnaK deletion suppressor protein compare
Atu2077 -0.7 -1.9 DNA polymerase III, epsilon subunit compare
Atu1387 -0.7 -1.5 transcriptional regulator, GntR family compare
Atu2217 -0.7 -3.0 hypothetical protein compare
Atu4894 -0.7 -3.9 transposase compare
Atu2184 -0.7 -3.1 transcriptional regulator, AsnC family compare
Atu4117 -0.6 -3.0 dipeptide ABC transporter ATPase compare
Atu4407 -0.6 -2.0 periplasmic nitrate reductase, NapD protein compare
Atu0201 -0.6 -1.6 hypothetical protein compare
Atu1503 -0.6 -1.1 hypothetical protein compare
Atu1455 -0.6 -2.9 hypothetical protein compare
Atu0354 -0.6 -1.1 ferric uptake regulator compare
Atu2646 -0.6 -2.3 hypothetical protein compare
Atu4880 -0.6 -4.9 AraC family transcriptional regulator compare
Atu3020 -0.6 -3.9 GntR family transcriptional regulator compare
Atu3579 -0.6 -1.4 lactoylglutathione lyase compare
Atu1513 -0.6 -2.1 ABC excinuclease subunit A compare
Atu1891 -0.6 -1.9 cobalamin biosynthesis protein compare
Atu8167 -0.6 -3.9 putative transmembrane protein compare
Atu1967 -0.6 -2.9 hypothetical protein compare
Atu4876 -0.6 -4.7 oxidoreductase compare
Atu4877 -0.6 -4.5 short-chain dehydrogenase compare
Atu0043 -0.6 -1.5 imidazoleglycerol-phosphate dehydratase compare
Atu2617 -0.6 -2.3 chemotaxis protein compare
Atu3744 -0.6 -3.8 ABC transporter permease compare
Atu0142 -0.6 -1.3 cytochrome o ubiquinol oxidase subunit II compare
Atu2650 -0.6 -4.1 glycerol-3-phosphate dehydrogenase compare
Atu0044 -0.6 -2.8 heat shock protein hslV compare
Atu3763 -0.6 -0.3 hypothetical protein compare
Atu2685 -0.6 -4.8 aconitate hydratase compare
Atu2274 -0.6 -3.8 cation efflux system protein compare
Atu4541 -0.6 -2.2 carboxymuconolactone decarboxylase compare
Atu2057 -0.6 -1.0 DNA helicase II compare
Atu3031 -0.6 -1.2 hypothetical protein compare
Atu2406 -0.6 -2.0 hypothetical protein compare
Atu1307 -0.6 -3.3 dihydroorotase compare
Atu1536 -0.6 -2.3 cytochrome C oxidase, FixO chain compare
Atu4869 -0.5 -2.7 hypothetical protein compare
Atu1380 -0.5 -3.6 zinc metallopeptidase compare
Atu3510 -0.5 -1.5 amidohydrolase compare
Atu0062 -0.5 -3.8 transcriptional regulator, ROK family compare
Atu2163 -0.5 -1.1 hypothetical protein compare
Atu0920 -0.5 -2.5 hypothetical protein compare
Atu3732 -0.5 -4.0 hemolysin compare
Atu1254 -0.5 -1.2 transcriptional regulator, ArsR family compare
Atu3519 -0.5 -3.1 peptidyl-prolyl cis-trans isomerase compare
Atu1830 -0.5 -1.5 bacterioferritin comigratory protein compare
Atu2578 -0.5 -1.9 cAMP-dependent protein kinase regulatory subunit compare
Atu2722 -0.5 -3.5 porin compare
Atu0073 -0.5 -2.9 recF-like protein compare
Atu4879 -0.5 -3.3 hypothetical protein compare
Atu4217 -0.5 -0.3 TetR family transcriptional regulator compare
Atu8034 -0.5 -1.5 hypothetical protein compare
Atu0846 -0.5 -2.0 transcriptional regulator, MarR family compare
Atu5167 -0.5 -2.7 type IV secretion protein AvhB6 compare
Atu3024 -0.5 -4.0 sugar ABC transporter permease compare
Atu2831 -0.5 -2.0 glucose inhibited division protein A compare
Atu0319 -0.5 -1.0 ubiquinone biosynthesis protein compare
Atu3518 -0.5 -2.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu4364 -0.5 -2.6 LacI family transcriptional regulator compare
Atu1683 -0.5 -1.0 hypothetical protein compare
Atu3423 -0.5 -1.4 hypothetical protein compare
Atu3739 -0.5 -2.1 phosphoglycerate kinase compare
Atu5045 -0.5 -1.6 hypothetical protein compare
Atu1415 -0.5 -2.9 3-hydroxyacyl-CoA dehydrogenase type II compare
Atu8138 -0.5 -1.0 hypothetical protein compare
Atu1039 -0.5 -1.9 DNA repair protein RecO compare
Atu4177 -0.5 -4.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu5163 -0.5 -1.7 type IV secretion protein AvhB2 compare
Atu4630 -0.5 -2.0 hypothetical protein compare
Atu8057 -0.5 -2.5 hypothetical protein compare
Atu2799 -0.5 -2.1 precorrin-6x reductase compare


Specific Phenotypes

For 2 genes in this experiment

For lb_sorghum nk 300 LB_Sorghum NK 300 in Agrobacterium fabrum C58

For lb_sorghum nk 300 LB_Sorghum NK 300 across organisms