Experiment set18S327 for Agrobacterium fabrum C58

Compare to:

LB_Sorghum NK 300

200 most detrimental genes:

  gene name fitness t score description  
Atu0888 +1.1 8.5 transcriptional regulator, MerR family compare
Atu1213 +0.9 2.3 hypothetical protein compare
Atu3730 +0.9 1.1 hypothetical protein compare
Atu3794 +0.8 5.2 FadR family transcriptional regulator compare
Atu0895 +0.8 1.9 ABC transporter, substrate binding protein compare
Atu1566 +0.7 1.5 hypothetical protein compare
Atu2368 +0.7 1.6 hypothetical protein compare
Atu0039 +0.7 1.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu3614 +0.7 4.9 glyoxalase II compare
Atu8054 +0.6 1.1 hypothetical protein compare
Atu0843 +0.6 5.3 P type cation (metal) transporter, ATPase component compare
Atu1968 +0.6 2.1 hypothetical protein compare
Atu1818 +0.6 2.6 hypothetical protein compare
Atu6165 +0.6 1.8 hypothetical protein compare
Atu1232 +0.6 2.3 hypothetical protein compare
Atu1754 +0.6 2.1 hypothetical protein compare
Atu0188 +0.5 0.5 ABC transporter, membrane spanning protein (peptide) compare
Atu3791 +0.5 3.5 L-asparaginase compare
Atu0703 +0.5 2.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu2204 +0.5 1.6 hypothetical protein compare
Atu2193 +0.5 0.9 hypothetical protein compare
Atu0886 +0.5 1.2 hypothetical protein compare
Atu8144 +0.5 2.3 hypothetical protein compare
Atu0806 +0.5 4.0 hypothetical protein compare
Atu0206 +0.5 2.6 hypothetical protein compare
Atu1644 +0.5 1.5 hypothetical protein compare
Atu3603 +0.5 1.6 two component response regulator compare
Atu5540 +0.4 0.9 hypothetical protein compare
Atu1581 +0.4 1.4 hypothetical protein compare
Atu0085 +0.4 2.2 tRNA pseudouridine 55 synthase compare
Atu3062 +0.4 2.8 LacI family transcriptional regulator compare
Atu3183 +0.4 0.8 hypothetical protein compare
Atu6039 +0.4 1.8 conjugal transfer protein compare
Atu1439 +0.4 1.0 hypothetical protein compare
Atu3465 +0.4 2.0 metallo-beta-lactamase superfamily protein compare
Atu2258 +0.4 1.4 acetyltransferase compare
Atu0809 +0.4 0.7 hypothetical protein compare
Atu0533 +0.4 1.9 putative inhibitor of septum formation compare
Atu6189 +0.4 1.2 protein secretion chaperone compare
Atu2662 +0.4 0.6 acetyltransferase compare
Atu0124 +0.4 1.1 hypothetical protein compare
Atu3054 +0.4 3.1 hypothetical protein compare
Atu3915 +0.4 1.9 MerR family transcriptional regulator compare
Atu3780 +0.4 2.1 hypothetical protein compare
Atu1236 +0.4 3.1 polysaccharide biosynthesis glycosyltransferase compare
Atu1847 +0.4 1.3 hypothetical protein compare
Atu4896 +0.4 0.8 acetyltransferase compare
Atu0086 +0.4 0.5 ribosome-binding factor A compare
Atu2657 +0.4 1.4 hypothetical protein compare
Atu0375 +0.4 0.8 small heat shock protein compare
Atu8032 +0.4 1.4 hypothetical protein compare
Atu1325 +0.4 1.0 acetyltransferase compare
Atu4779 +0.4 1.7 hypothetical protein compare
Atu6114 +0.4 1.2 hypothetical protein compare
Atu0941 +0.4 0.7 hypothetical protein compare
Atu2058 +0.4 1.8 hypothetical protein compare
Atu3059 +0.4 3.1 Na+/H+ antiporter compare
Atu1525 +0.4 2.0 hypothetical protein compare
Atu8162 +0.4 0.8 hypothetical protein compare
Atu2762 +0.4 1.5 hypothetical protein compare
Atu8022 +0.3 1.6 hypothetical protein compare
Atu1978 +0.3 1.6 hypothetical protein compare
Atu3067 +0.3 2.2 hypothetical protein compare
Atu4791 +0.3 2.1 hypothetical protein compare
Atu4825 +0.3 2.2 dehydrogenase compare
Atu0488 +0.3 1.5 hypothetical protein compare
Atu1846 +0.3 0.8 hypothetical protein compare
Atu4836 +0.3 2.3 hypothetical protein compare
Atu5455 +0.3 1.6 hypothetical protein compare
Atu4213 +0.3 1.8 hypothetical protein compare
Atu4456 +0.3 1.7 CysZ-like protein compare
Atu1658 +0.3 1.6 conserved protein involved in phosphoglycerol modification of cyclic glucan compare
Atu1175 +0.3 0.9 hypothetical protein compare
Atu3427 +0.3 1.2 hypothetical protein compare
Atu4777 +0.3 2.8 hypothetical protein compare
Atu3073 +0.3 2.2 aspartate racemase compare
Atu8195 +0.3 1.4 hypothetical protein compare
Atu4803 +0.3 1.9 two component response regulator compare
Atu4234 +0.3 1.9 amino acid ABC transporter permease compare
Atu6107 +0.3 1.9 hypothetical protein compare
Atu3467 +0.3 1.4 hypothetical protein compare
Atu1980 +0.3 0.9 hypothetical protein compare
Atu4807 +0.3 2.3 exopolysaccharide export protein compare
Atu4848 +0.3 2.3 2-deoxyribose-5-phosphate aldolase compare
Atu1647 +0.3 2.0 ABC transporter, membrane spanning protein compare
Atu1969 +0.3 1.7 hypothetical protein compare
Atu3084 +0.3 2.4 RNA polymerase sigma factor compare
Atu4857 +0.3 1.6 mobilization protein C compare
Atu4144 +0.3 0.7 hypothetical protein compare
Atu3077 +0.3 2.5 beta-lactamase compare
Atu0684 +0.3 1.9 hypothetical protein compare
Atu4833 +0.3 2.9 glucoamylase compare
Atu4842 +0.3 2.8 sugar ABC transporter substrate-binding protein compare
Atu4290 +0.3 1.7 hypothetical protein compare
Atu0381 +0.3 1.1 hypothetical protein compare
Atu3100 +0.3 2.0 sugar ABC transporter permease compare
Atu2347 +0.3 2.1 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu1863 +0.3 2.1 permease compare
Atu1646 +0.3 1.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu2293 +0.3 1.1 hypothetical protein compare
Atu3105 +0.3 1.3 hypothetical protein compare
Atu4844 +0.3 2.3 sugar ABC transporter permease compare
Atu5430 +0.3 0.7 hypothetical protein compare
Atu4589 +0.3 1.8 transmembrane transport protein compare
Atu0435 +0.3 1.0 tRNA-Gly compare
Atu8055 +0.3 1.0 hypothetical protein compare
Atu3986 +0.3 2.1 hypothetical protein compare
Atu4677 +0.3 0.9 hypothetical protein compare
Atu4837 +0.3 1.9 hypothetical protein compare
Atu4669 +0.3 1.9 hypothetical protein compare
Atu2144 +0.3 2.2 hypothetical protein compare
Atu0986 +0.3 0.8 hypothetical protein compare
Atu4309 +0.3 2.2 AraC family transcriptional regulator compare
Atu1287 +0.3 1.2 hypothetical protein compare
Atu0530 +0.3 2.0 UDP-galactose 4-epimerase compare
Atu3063 +0.3 1.6 ABC transporter permease compare
Atu3070 +0.3 2.1 allantoate amidohydrolase compare
Atu0013 +0.3 2.2 NAD(P)H-flavin oxidoreductase compare
Atu2317 +0.3 1.4 hypothetical protein compare
Atu4849 +0.3 2.6 NADP-dependent aldehyde dehydrogenase compare
Atu0107 +0.3 1.1 hypothetical protein compare
Atu0097 +0.3 1.9 hypothetical protein compare
Atu1469 +0.3 1.0 hypothetical protein compare
Atu0220 +0.3 1.5 components of type IV pilus compare
Atu2192 +0.3 0.7 hypothetical protein compare
Atu1551 +0.3 1.8 hypothetical protein compare
Atu2029 +0.3 1.5 hypothetical protein compare
Atu1056 +0.3 1.5 hypothetical protein compare
Atu1553 +0.3 1.6 hypothetical protein compare
Atu3199 +0.3 2.1 ribose ABC transporter permease compare
Atu4811 +0.3 1.7 UDP-phosphate alpha N-acetylglucosaminyltransferase compare
Atu1517 +0.3 1.7 hypothetical protein compare
Atu0117 +0.3 2.0 hypothetical protein compare
Atu2407 +0.3 1.5 urease gamma subunit compare
Atu4806 +0.3 2.3 glycosyltransferase compare
Atu5057 +0.3 1.1 hypothetical protein compare
Atu3057 +0.3 2.2 hypothetical protein compare
Atu4778 +0.3 2.2 non-heme chloroperoxidase compare
Atu1026 +0.3 0.9 hypothetical protein compare
Atu1184 +0.3 1.2 hypothetical protein compare
Atu1639 +0.3 0.9 hypothetical protein compare
Atu4812 +0.3 1.9 hypothetical protein compare
Atu0755 +0.3 1.2 hypothetical protein compare
Atu3833 +0.3 1.4 hypothetical protein compare
Atu3130 +0.3 1.8 sugar ABC transporter substrate-binding protein compare
Atu8194 +0.3 1.4 hypothetical protein compare
Atu2021 +0.3 1.7 transcriptional regulator, AraC family compare
Atu0452 +0.3 1.9 hypothetical protein compare
Atu5028 +0.3 1.2 IS426 transposase compare
Atu8122 +0.3 1.5 hypothetical protein compare
Atu2273 +0.3 1.2 hypothetical protein compare
Atu4486 +0.3 1.3 nitroreductase compare
Atu0536 +0.3 1.6 hypothetical protein compare
Atu4775 +0.3 2.1 two component sensor kinase compare
Atu0696 +0.3 1.3 phosphatase compare
Atu1495 +0.3 1.1 hypothetical protein compare
Atu4674 +0.3 1.8 GntR family transcriptional regulator compare
Atu3193 +0.3 1.5 MarR family transcriptional regulator compare
Atu2208 +0.3 1.4 secretion chaperone compare
Atu3090 +0.3 1.3 DNA polymerase III subunit epsilon compare
Atu6138 +0.3 1.7 Repressor of the acc and arc operons compare
Atu4834 +0.3 1.9 6-phosphogluconate dehydrogenase compare
Atu1799 +0.3 1.8 hypothetical protein compare
Atu0115 +0.3 0.5 hypothetical protein compare
Atu1883 +0.3 1.8 hypothetical protein compare
Atu3110 +0.3 1.6 hypothetical protein compare
Atu3317 +0.3 1.2 hypothetical protein compare
Atu3045 +0.3 1.8 hypothetical protein compare
Atu2328 +0.3 1.8 hypothetical protein compare
Atu4345 +0.3 1.0 hypothetical protein compare
Atu3039 +0.2 1.9 hydantoinase beta subunit-like protein compare
Atu4821 +0.2 1.9 3-oxoacyl-ACP reductase compare
Atu3079 +0.2 2.0 chromate transport protein compare
Atu1731 +0.2 1.4 xanthine-guanine phosphoribosyltransferase compare
Atu0197 +0.2 1.8 ABC transporter, nucleotide binding/ATPase protein (proline/glycine/betaine) compare
Atu1203 +0.2 0.9 hypothetical protein compare
Atu0130 +0.2 1.3 cytidine deaminase compare
Atu2335 +0.2 0.6 hypothetical protein compare
Atu0540 +0.2 1.4 hypothetical protein compare
Atu3093 +0.2 1.5 transglycosylase compare
Atu8135 +0.2 1.9 hypothetical protein compare
Atu0947 +0.2 0.8 transcriptional regulator, AsnC family compare
Atu1500 +0.2 1.0 rare lipoprotein A compare
Atu4816 +0.2 2.0 glycosyltransferase compare
Atu3052 +0.2 1.1 MarR family transcriptional regulator compare
Atu3092 +0.2 2.0 hypothetical protein compare
Atu8094 +0.2 0.7 hypothetical protein compare
Atu0679 +0.2 1.5 ATP phosphoribosyltransferase compare
Atu1666 +0.2 1.6 hypothetical protein compare
Atu2465 +0.2 1.3 two component sensor kinase compare
Atu3476 +0.2 1.1 AsnC family transcriptional regulator compare
Atu8133 +0.2 1.4 hypothetical protein compare
Atu4832 +0.2 1.9 hypothetical protein compare
Atu0328 +0.2 1.7 heat-inducible transcription repressor compare
Atu4774 +0.2 1.9 two component response regulator compare
Atu0432 +0.2 1.8 O-succinylhomoserine sulfhydrylase compare
Atu3044 +0.2 1.5 asparaginase compare
Atu1499 +0.2 1.5 penicillin binding protein compare
Atu4847 +0.2 1.9 ribokinase compare
Atu4457 +0.2 1.9 endonuclease III compare


Specific Phenotypes

For 2 genes in this experiment

For lb_sorghum nk 300 LB_Sorghum NK 300 in Agrobacterium fabrum C58

For lb_sorghum nk 300 LB_Sorghum NK 300 across organisms